RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 NUDT16Q96DE0 195 aaKnown RBP36.55■■■■□ 3.44
CSPG5-205ENST00000610462 AKAP12Q02952 1782 aa36.54■■■■□ 3.44
CSPG5-205ENST00000610462 ROBO2Q9HCK4 1378 aa36.53■■■■□ 3.44
CSPG5-205ENST00000610462 U2SURPO15042 1029 aaKnown RBP36.53■■■■□ 3.44
CSPG5-205ENST00000610462 SLIT1O75093 1534 aa36.53■■■■□ 3.44
CSPG5-205ENST00000610462 ITSN1Q15811 1721 aa36.52■■■■□ 3.44
CSPG5-205ENST00000610462 PLEKHF1Q96S99 279 aa36.52■■■■□ 3.44
CSPG5-205ENST00000610462 BCAR3O75815 825 aa36.51■■■■□ 3.44
CSPG5-205ENST00000610462 CCDC61Q9Y6R9 512 aa36.51■■■■□ 3.44
CSPG5-205ENST00000610462 MAP2P11137 1827 aaKnown RBP36.51■■■■□ 3.44
CSPG5-205ENST00000610462 ARHGAP23Q9P227 1491 aa36.51■■■■□ 3.43
CSPG5-205ENST00000610462 DIAPH1O60610 1272 aaKnown RBP36.5■■■■□ 3.43
CSPG5-205ENST00000610462 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.49■■■■□ 3.43
CSPG5-205ENST00000610462 EID1Q9Y6B2 187 aa36.49■■■■□ 3.43
CSPG5-205ENST00000610462 ANP32EQ9BTT0 268 aa36.47■■■■□ 3.43
CSPG5-205ENST00000610462 POLKQ9UBT6 870 aa36.44■■■■□ 3.42
CSPG5-205ENST00000610462 MAPK8IP3Q9UPT6 1336 aa36.43■■■■□ 3.42
CSPG5-205ENST00000610462 TCERG1O14776 1098 aaKnown RBP36.43■■■■□ 3.42
CSPG5-205ENST00000610462 PNNQ9H307 717 aaKnown RBP36.43■■■■□ 3.42
CSPG5-205ENST00000610462 PRR36Q9H6K5 1346 aa36.42■■■■□ 3.42
CSPG5-205ENST00000610462 MYH16Q9H6N6 1097 aa36.42■■■■□ 3.42
CSPG5-205ENST00000610462 NCKAP5LQ9HCH0 1330 aa36.42■■■■□ 3.42
CSPG5-205ENST00000610462 TRHP20396 242 aaPredicted RBP36.41■■■■□ 3.42
CSPG5-205ENST00000610462 TMPOP42166 694 aaKnown RBP36.41■■■■□ 3.42
CSPG5-205ENST00000610462 TOPAZ1Q8N9V7 1692 aa36.41■■■■□ 3.42
CSPG5-205ENST00000610462 PTPRUQ92729 1446 aa36.41■■■■□ 3.42
CSPG5-205ENST00000610462 NME9Q86XW9 330 aa36.4■■■■□ 3.42
CSPG5-205ENST00000610462 ZNF692Q9BU19 519 aaPredicted RBP36.4■■■■□ 3.42
CSPG5-205ENST00000610462 PDE3AQ14432 1141 aa36.38■■■■□ 3.41
CSPG5-205ENST00000610462 SLC26A8Q96RN1 970 aa36.38■■■■□ 3.41
CSPG5-205ENST00000610462 KDM2BQ8NHM5 1336 aa36.38■■■■□ 3.41
CSPG5-205ENST00000610462 AATKQ6ZMQ8 1374 aa36.37■■■■□ 3.41
CSPG5-205ENST00000610462 RARSP54136 660 aaKnown RBP36.36■■■■□ 3.41
CSPG5-205ENST00000610462 PLPPR3Q6T4P5 718 aa36.36■■■■□ 3.41
CSPG5-205ENST00000610462 THEMISQ8N1K5 641 aaPredicted RBP36.36■■■■□ 3.41
CSPG5-205ENST00000610462 FBLN1P23142 703 aa36.35■■■■□ 3.41
CSPG5-205ENST00000610462 DIP2AQ14689 1571 aa36.35■■■■□ 3.41
CSPG5-205ENST00000610462 TBX22Q9Y458 520 aa36.35■■■■□ 3.41
CSPG5-205ENST00000610462 FCHSD2O94868 740 aa36.35■■■■□ 3.41
CSPG5-205ENST00000610462 TRIM35Q9UPQ4 493 aa36.34■■■■□ 3.41
CSPG5-205ENST00000610462 LRRC7Q96NW7 1537 aa36.34■■■■□ 3.41
CSPG5-205ENST00000610462 CDK12Q9NYV4 1490 aaPredicted RBP36.34■■■■□ 3.41
CSPG5-205ENST00000610462 PPM1GO15355 546 aaPredicted RBP36.33■■■■□ 3.41
CSPG5-205ENST00000610462 CENPQQ7L2Z9 268 aaPredicted RBP36.33■■■■□ 3.41
CSPG5-205ENST00000610462 COG3Q96JB2 828 aa36.33■■■■□ 3.41
CSPG5-205ENST00000610462 NRKQ7Z2Y5 1582 aa36.32■■■■□ 3.41
CSPG5-205ENST00000610462 MS4A1P11836 297 aa36.32■■■■□ 3.4
CSPG5-205ENST00000610462 ZRANB1Q9UGI0 708 aa36.32■■■■□ 3.4
CSPG5-205ENST00000610462 IL16Q14005 1332 aa36.29■■■■□ 3.4
CSPG5-205ENST00000610462 CANXP27824 592 aaKnown RBP36.29■■■■□ 3.4
CSPG5-205ENST00000610462 AMOTL2Q9Y2J4 779 aa36.29■■■■□ 3.4
CSPG5-205ENST00000610462 EMILIN1Q9Y6C2 1016 aa36.29■■■■□ 3.4
CSPG5-205ENST00000610462 PTCH1Q13635 1447 aa36.29■■■■□ 3.4
CSPG5-205ENST00000610462 MSH5O43196 834 aa36.28■■■■□ 3.4
CSPG5-205ENST00000610462 PLEKHG3A1L390 1219 aa36.28■■■■□ 3.4
CSPG5-205ENST00000610462 RSPH6AQ9H0K4 717 aa36.28■■■■□ 3.4
CSPG5-205ENST00000610462 RIPK4P57078 832 aa36.27■■■■□ 3.4
CSPG5-205ENST00000610462 CT47B1P0C2W7 299 aaPredicted RBP36.26■■■■□ 3.4
CSPG5-205ENST00000610462 ACEP12821 1306 aa36.23■■■■□ 3.39
CSPG5-205ENST00000610462 IL13P35225 146 aa36.23■■■■□ 3.39
CSPG5-205ENST00000610462 PRKAR2BP31323 418 aa36.22■■■■□ 3.39
CSPG5-205ENST00000610462 FRAT1Q92837 279 aaPredicted RBP36.22■■■■□ 3.39
CSPG5-205ENST00000610462 TTC21BQ7Z4L5 1316 aa36.22■■■■□ 3.39
CSPG5-205ENST00000610462 XRN1Q8IZH2 1706 aaKnown RBP36.22■■■■□ 3.39
CSPG5-205ENST00000610462 CEP170BQ9Y4F5 1589 aaPredicted RBP36.21■■■■□ 3.39
CSPG5-205ENST00000610462 NEFMP07197 916 aa36.2■■■■□ 3.39
CSPG5-205ENST00000610462 PANK1Q8TE04 598 aa36.2■■■■□ 3.39
CSPG5-205ENST00000610462 TSR2Q969E8 191 aaKnown RBP36.2■■■■□ 3.39
CSPG5-205ENST00000610462 USP6P35125 1406 aa36.19■■■■□ 3.38
CSPG5-205ENST00000610462 RIMS1Q86UR5 1692 aaKnown RBP36.19■■■■□ 3.38
CSPG5-205ENST00000610462 COG6Q9Y2V7 657 aa36.17■■■■□ 3.38
CSPG5-205ENST00000610462 NUTM2FA1L443 756 aa36.16■■■■□ 3.38
CSPG5-205ENST00000610462 PDE4AP27815 886 aa36.16■■■■□ 3.38
CSPG5-205ENST00000610462 NALCNQ8IZF0 1738 aa36.16■■■■□ 3.38
CSPG5-205ENST00000610462 EXOSC9Q06265 439 aaKnown RBP36.15■■■■□ 3.38
CSPG5-205ENST00000610462 RRS1Q15050 365 aaKnown RBP36.15■■■■□ 3.38
CSPG5-205ENST00000610462 OVOS2A0A0J9YW53 1432 aa36.15■■■■□ 3.38
CSPG5-205ENST00000610462 OVOS2Q6IE36 1432 aa36.15■■■■□ 3.38
CSPG5-205ENST00000610462 HMOX1P09601 288 aa36.14■■■■□ 3.38
CSPG5-205ENST00000610462 BCL2L13Q9BXK5 485 aa36.14■■■■□ 3.38
CSPG5-205ENST00000610462 NFE2L2Q16236 605 aa36.13■■■■□ 3.37
CSPG5-205ENST00000610462 BACH2Q9BYV9 841 aa36.13■■■■□ 3.37
CSPG5-205ENST00000610462 AAMPQ13685 434 aa36.12■■■■□ 3.37
CSPG5-205ENST00000610462 SKAP1Q86WV1 359 aa36.12■■■■□ 3.37
CSPG5-205ENST00000610462 CLUAP1Q96AJ1 413 aa36.12■■■■□ 3.37
CSPG5-205ENST00000610462 RGPD8O14715 1765 aaPredicted RBP36.12■■■■□ 3.37
CSPG5-205ENST00000610462 SSH2Q76I76 1423 aa36.11■■■■□ 3.37
CSPG5-205ENST00000610462 PIK3R4Q99570 1358 aa36.1■■■■□ 3.37
CSPG5-205ENST00000610462 PHACTR3Q96KR7 559 aa36.1■■■■□ 3.37
CSPG5-205ENST00000610462 RLBP1P12271 317 aa36.07■■■■□ 3.37
CSPG5-205ENST00000610462 ANP32AP39687 249 aaKnown RBP36.06■■■■□ 3.36
CSPG5-205ENST00000610462 TNNQ9UQP3 1299 aa36.06■■■■□ 3.36
CSPG5-205ENST00000610462 DLG5Q8TDM6 1919 aa36.05■■■■□ 3.36
CSPG5-205ENST00000610462 ZNF142P52746 1687 aaPredicted RBP36.05■■■■□ 3.36
CSPG5-205ENST00000610462 ZKSCAN2Q63HK3 967 aa36.05■■■■□ 3.36
CSPG5-205ENST00000610462 USP31Q70CQ4 1352 aa36.05■■■■□ 3.36
CSPG5-205ENST00000610462 TTC21AQ8NDW8 1320 aa36.04■■■■□ 3.36
CSPG5-205ENST00000610462 SMC4Q9NTJ3 1288 aa36.03■■■■□ 3.36
CSPG5-205ENST00000610462 IGHDP01880 384 aa36.03■■■■□ 3.36
CSPG5-205ENST00000610462 CALD1Q05682 793 aaKnown RBP36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms