RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TPD52L1Q16890 204 aaPredicted RBP17.26■□□□□ 0.35
PCDHB16-201ENST00000609684 VPS37DQ86XT2 251 aa17.26■□□□□ 0.35
PCDHB16-201ENST00000609684 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
PCDHB16-201ENST00000609684 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
PCDHB16-201ENST00000609684 FSD1Q9BTV5 496 aa17.26■□□□□ 0.35
PCDHB16-201ENST00000609684 KIF14Q15058 1648 aa17.25■□□□□ 0.35
PCDHB16-201ENST00000609684 NEK4P51957 841 aa17.25■□□□□ 0.35
PCDHB16-201ENST00000609684 FOSBP53539 338 aa17.25■□□□□ 0.35
PCDHB16-201ENST00000609684 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
PCDHB16-201ENST00000609684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 FCHSD2O94868 740 aa17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 TPM3P06753 285 aa17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
PCDHB16-201ENST00000609684 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
PCDHB16-201ENST00000609684 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
PCDHB16-201ENST00000609684 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
PCDHB16-201ENST00000609684 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
PCDHB16-201ENST00000609684 RALYLQ86SE5 291 aaKnown RBP17.22■□□□□ 0.35
PCDHB16-201ENST00000609684 RABEP1Q15276 862 aa17.22■□□□□ 0.35
PCDHB16-201ENST00000609684 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
PCDHB16-201ENST00000609684 MSH5O43196 834 aa17.22■□□□□ 0.35
PCDHB16-201ENST00000609684 TRAK2O60296 914 aa17.21■□□□□ 0.35
PCDHB16-201ENST00000609684 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
PCDHB16-201ENST00000609684 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.35
PCDHB16-201ENST00000609684 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
PCDHB16-201ENST00000609684 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.34
PCDHB16-201ENST00000609684 ADGRF5Q8IZF2 1346 aa17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 PSMA5P28066 241 aa17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
PCDHB16-201ENST00000609684 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 ERICH2A1L162 156 aa17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
PCDHB16-201ENST00000609684 SASS6Q6UVJ0 657 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 LRRCC1Q9C099 1032 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 MRE11P49959 708 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 TMEM57Q8N5G2 664 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
PCDHB16-201ENST00000609684 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 RAD21O60216 631 aa17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 MCM2P49736 904 aa17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
PCDHB16-201ENST00000609684 TPM1P09493 284 aa17.16■□□□□ 0.34
PCDHB16-201ENST00000609684 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
PCDHB16-201ENST00000609684 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
PCDHB16-201ENST00000609684 CAVIN1Q6NZI2 390 aaKnown RBP17.16■□□□□ 0.34
PCDHB16-201ENST00000609684 RNF214Q8ND24 703 aa17.16■□□□□ 0.34
PCDHB16-201ENST00000609684 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
PCDHB16-201ENST00000609684 NASPP49321 788 aaPredicted RBP17.15■□□□□ 0.34
PCDHB16-201ENST00000609684 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
PCDHB16-201ENST00000609684 SAFBQ15424 915 aaKnown RBP eCLIP17.15■□□□□ 0.34
PCDHB16-201ENST00000609684 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
PCDHB16-201ENST00000609684 CCAR2Q8N163 923 aaKnown RBP17.14■□□□□ 0.34
PCDHB16-201ENST00000609684 HIP1O00291 1037 aa17.14■□□□□ 0.33
PCDHB16-201ENST00000609684 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
PCDHB16-201ENST00000609684 RARSP54136 660 aaKnown RBP17.14■□□□□ 0.33
PCDHB16-201ENST00000609684 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
PCDHB16-201ENST00000609684 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
PCDHB16-201ENST00000609684 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 SIL1Q9H173 461 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 GOLGA6L1Q8N7Z2 621 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 SKAP1Q86WV1 359 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
PCDHB16-201ENST00000609684 MBD3O95983 291 aa17.12■□□□□ 0.33
PCDHB16-201ENST00000609684 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
PCDHB16-201ENST00000609684 FYB1O15117 783 aa17.12■□□□□ 0.33
PCDHB16-201ENST00000609684 TPM2P07951 284 aa17.12■□□□□ 0.33
PCDHB16-201ENST00000609684 IDI1Q13907 227 aa17.12■□□□□ 0.33
PCDHB16-201ENST00000609684 K7ELQ4 463 aaPredicted RBP17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 NME9Q86XW9 330 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 CABP4P57796 275 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 MCM10Q7L590 875 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
PCDHB16-201ENST00000609684 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms