RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 A0A1W2PP64 1363 aa18.61■□□□□ 0.57
CTCFL-219ENST00000608720 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
CTCFL-219ENST00000608720 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
CTCFL-219ENST00000608720 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
CTCFL-219ENST00000608720 IDI1Q13907 227 aa18.61■□□□□ 0.57
CTCFL-219ENST00000608720 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
CTCFL-219ENST00000608720 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
CTCFL-219ENST00000608720 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
CTCFL-219ENST00000608720 ATAD2Q6PL18 1390 aa18.6■□□□□ 0.57
CTCFL-219ENST00000608720 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
CTCFL-219ENST00000608720 RAPGEF3O95398 923 aa18.59■□□□□ 0.57
CTCFL-219ENST00000608720 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTCFL-219ENST00000608720 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
CTCFL-219ENST00000608720 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
CTCFL-219ENST00000608720 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
CTCFL-219ENST00000608720 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
CTCFL-219ENST00000608720 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
CTCFL-219ENST00000608720 NEO1Q92859 1461 aa18.58■□□□□ 0.57
CTCFL-219ENST00000608720 GLIPR1L2Q4G1C9 344 aa18.58■□□□□ 0.57
CTCFL-219ENST00000608720 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.57
CTCFL-219ENST00000608720 STK26Q9P289 416 aa18.58■□□□□ 0.56
CTCFL-219ENST00000608720 MED14O60244 1454 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 FYB1O15117 783 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 TRIM27P14373 513 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 ATF7IPQ6VMQ6 1270 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 ANTXR1Q9H6X2 564 aa18.57■□□□□ 0.56
CTCFL-219ENST00000608720 SIGLEC1Q9BZZ2 1709 aa18.56■□□□□ 0.56
CTCFL-219ENST00000608720 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
CTCFL-219ENST00000608720 SLKQ9H2G2 1235 aaPredicted RBP18.55■□□□□ 0.56
CTCFL-219ENST00000608720 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
CTCFL-219ENST00000608720 PKNOX2Q96KN3 472 aa18.54■□□□□ 0.56
CTCFL-219ENST00000608720 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
CTCFL-219ENST00000608720 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
CTCFL-219ENST00000608720 RIPK4P57078 832 aa18.54■□□□□ 0.56
CTCFL-219ENST00000608720 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
CTCFL-219ENST00000608720 HDGFL2Q7Z4V5 671 aaPredicted RBP18.53■□□□□ 0.56
CTCFL-219ENST00000608720 POGKQ9P215 609 aa18.53■□□□□ 0.56
CTCFL-219ENST00000608720 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
CTCFL-219ENST00000608720 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
CTCFL-219ENST00000608720 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.56
CTCFL-219ENST00000608720 KIF16BQ96L93 1317 aa18.52■□□□□ 0.55
CTCFL-219ENST00000608720 PTPRMP28827 1452 aa18.52■□□□□ 0.55
CTCFL-219ENST00000608720 SMC5Q8IY18 1101 aa18.51■□□□□ 0.55
CTCFL-219ENST00000608720 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
CTCFL-219ENST00000608720 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
CTCFL-219ENST00000608720 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
CTCFL-219ENST00000608720 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
CTCFL-219ENST00000608720 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
CTCFL-219ENST00000608720 YTHDC2Q9H6S0 1430 aaKnown RBP18.5■□□□□ 0.55
CTCFL-219ENST00000608720 FCHSD2O94868 740 aa18.5■□□□□ 0.55
CTCFL-219ENST00000608720 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
CTCFL-219ENST00000608720 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
CTCFL-219ENST00000608720 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
CTCFL-219ENST00000608720 L1TD1Q5T7N2 865 aaKnown RBP18.48■□□□□ 0.55
CTCFL-219ENST00000608720 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
CTCFL-219ENST00000608720 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
CTCFL-219ENST00000608720 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
CTCFL-219ENST00000608720 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
CTCFL-219ENST00000608720 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
CTCFL-219ENST00000608720 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
CTCFL-219ENST00000608720 ANKRD26Q9UPS8 1709 aa18.44■□□□□ 0.54
CTCFL-219ENST00000608720 NUCB1Q02818 461 aa18.44■□□□□ 0.54
CTCFL-219ENST00000608720 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
CTCFL-219ENST00000608720 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
CTCFL-219ENST00000608720 CHMP5Q9NZZ3 219 aa18.43■□□□□ 0.54
CTCFL-219ENST00000608720 ARHGEF40Q8TER5 1519 aa18.43■□□□□ 0.54
CTCFL-219ENST00000608720 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
CTCFL-219ENST00000608720 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
CTCFL-219ENST00000608720 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
CTCFL-219ENST00000608720 RICTORQ6R327 1708 aa18.41■□□□□ 0.54
CTCFL-219ENST00000608720 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
CTCFL-219ENST00000608720 PPIP5K1Q6PFW1 1433 aa18.41■□□□□ 0.54
CTCFL-219ENST00000608720 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
CTCFL-219ENST00000608720 MCM4P33991 863 aa18.4■□□□□ 0.54
CTCFL-219ENST00000608720 HSCBQ8IWL3 235 aa18.4■□□□□ 0.54
CTCFL-219ENST00000608720 ARHGAP45Q92619 1136 aa18.4■□□□□ 0.54
CTCFL-219ENST00000608720 RRAGDQ9NQL2 400 aaPredicted RBP18.4■□□□□ 0.54
CTCFL-219ENST00000608720 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CTCFL-219ENST00000608720 NFE2L2Q16236 605 aa18.39■□□□□ 0.54
CTCFL-219ENST00000608720 CHD1LQ86WJ1 897 aa18.39■□□□□ 0.54
CTCFL-219ENST00000608720 ALKQ9UM73 1620 aa18.39■□□□□ 0.54
CTCFL-219ENST00000608720 PREX1Q8TCU6 1659 aa18.39■□□□□ 0.53
CTCFL-219ENST00000608720 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
CTCFL-219ENST00000608720 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
CTCFL-219ENST00000608720 RRP9O43818 475 aaKnown RBP18.38■□□□□ 0.53
CTCFL-219ENST00000608720 STAG3Q9UJ98 1225 aa18.38■□□□□ 0.53
CTCFL-219ENST00000608720 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
CTCFL-219ENST00000608720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTCFL-219ENST00000608720 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
CTCFL-219ENST00000608720 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
CTCFL-219ENST00000608720 VAMP4O75379 141 aa18.37■□□□□ 0.53
CTCFL-219ENST00000608720 GNAI1P63096 354 aa18.37■□□□□ 0.53
CTCFL-219ENST00000608720 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
CTCFL-219ENST00000608720 SNX21Q969T3 373 aa18.37■□□□□ 0.53
CTCFL-219ENST00000608720 LNPKQ9C0E8 428 aa18.37■□□□□ 0.53
CTCFL-219ENST00000608720 ATP7BP35670 1465 aa18.36■□□□□ 0.53
CTCFL-219ENST00000608720 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
CTCFL-219ENST00000608720 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
CTCFL-219ENST00000608720 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms