RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
LINC00343-212ENST00000608624 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
LINC00343-212ENST00000608624 BRINP3Q76B58 766 aa12.79□□□□□ -0.36
LINC00343-212ENST00000608624 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
LINC00343-212ENST00000608624 FBXO41Q8TF61 875 aa12.79□□□□□ -0.36
LINC00343-212ENST00000608624 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-212ENST00000608624 TOM1O60784 492 aa12.78□□□□□ -0.36
LINC00343-212ENST00000608624 CDK19Q9BWU1 502 aa12.78□□□□□ -0.36
LINC00343-212ENST00000608624 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
LINC00343-212ENST00000608624 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
LINC00343-212ENST00000608624 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.37
LINC00343-212ENST00000608624 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
LINC00343-212ENST00000608624 SBNO2Q9Y2G9 1366 aa12.76□□□□□ -0.37
LINC00343-212ENST00000608624 HSPA1LP34931 641 aa12.75□□□□□ -0.37
LINC00343-212ENST00000608624 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-212ENST00000608624 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-212ENST00000608624 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-212ENST00000608624 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
LINC00343-212ENST00000608624 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
LINC00343-212ENST00000608624 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
LINC00343-212ENST00000608624 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
LINC00343-212ENST00000608624 PXDNQ92626 1479 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
LINC00343-212ENST00000608624 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
LINC00343-212ENST00000608624 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
LINC00343-212ENST00000608624 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 MYOM1P52179 1685 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
LINC00343-212ENST00000608624 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
LINC00343-212ENST00000608624 EVC2Q86UK5 1308 aa12.71□□□□□ -0.37
LINC00343-212ENST00000608624 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00343-212ENST00000608624 FOXO3O43524 673 aa12.7□□□□□ -0.38
LINC00343-212ENST00000608624 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
LINC00343-212ENST00000608624 TRPM3Q9HCF6 1732 aaPredicted RBP12.7□□□□□ -0.38
LINC00343-212ENST00000608624 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
LINC00343-212ENST00000608624 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
LINC00343-212ENST00000608624 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
LINC00343-212ENST00000608624 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
LINC00343-212ENST00000608624 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
LINC00343-212ENST00000608624 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
LINC00343-212ENST00000608624 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
LINC00343-212ENST00000608624 ACEP12821 1306 aa12.66□□□□□ -0.38
LINC00343-212ENST00000608624 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
LINC00343-212ENST00000608624 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
LINC00343-212ENST00000608624 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
LINC00343-212ENST00000608624 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
LINC00343-212ENST00000608624 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
LINC00343-212ENST00000608624 SOS2Q07890 1332 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-212ENST00000608624 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
LINC00343-212ENST00000608624 TMF1P82094 1093 aa12.65□□□□□ -0.38
LINC00343-212ENST00000608624 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
LINC00343-212ENST00000608624 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 USP6P35125 1406 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
LINC00343-212ENST00000608624 LRP6O75581 1613 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
LINC00343-212ENST00000608624 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
LINC00343-212ENST00000608624 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
LINC00343-212ENST00000608624 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
LINC00343-212ENST00000608624 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-212ENST00000608624 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
LINC00343-212ENST00000608624 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-212ENST00000608624 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
LINC00343-212ENST00000608624 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-212ENST00000608624 PSME1Q06323 249 aa12.6□□□□□ -0.39
LINC00343-212ENST00000608624 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
LINC00343-212ENST00000608624 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
LINC00343-212ENST00000608624 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
LINC00343-212ENST00000608624 JCADQ9P266 1359 aa12.58□□□□□ -0.4
LINC00343-212ENST00000608624 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-212ENST00000608624 CABLES1Q8TDN4 633 aa12.58□□□□□ -0.4
LINC00343-212ENST00000608624 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
LINC00343-212ENST00000608624 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
LINC00343-212ENST00000608624 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
LINC00343-212ENST00000608624 LMOD2Q6P5Q4 547 aa12.57□□□□□ -0.4
LINC00343-212ENST00000608624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00343-212ENST00000608624 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
LINC00343-212ENST00000608624 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
LINC00343-212ENST00000608624 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
LINC00343-212ENST00000608624 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
LINC00343-212ENST00000608624 NME9Q86XW9 330 aa12.56□□□□□ -0.4
LINC00343-212ENST00000608624 TTC21BQ7Z4L5 1316 aa12.56□□□□□ -0.4
LINC00343-212ENST00000608624 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
LINC00343-212ENST00000608624 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
LINC00343-212ENST00000608624 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
LINC00343-212ENST00000608624 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms