RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
LINC00649-213ENST00000608431 MIER1Q8N108 512 aa8.9□□□□□ -0.98
LINC00649-213ENST00000608431 PCDH10Q9P2E7 1040 aa8.9□□□□□ -0.98
LINC00649-213ENST00000608431 RGPD3A6NKT7 1758 aaPredicted RBP8.9□□□□□ -0.98
LINC00649-213ENST00000608431 RGPD4Q7Z3J3 1758 aa8.9□□□□□ -0.98
LINC00649-213ENST00000608431 KIF1AQ12756 1690 aa8.9□□□□□ -0.98
LINC00649-213ENST00000608431 DLC1Q96QB1 1528 aa8.9□□□□□ -0.99
LINC00649-213ENST00000608431 FAM196AQ6ZSG2 479 aa8.89□□□□□ -0.99
LINC00649-213ENST00000608431 PLCD3Q8N3E9 789 aa8.89□□□□□ -0.99
LINC00649-213ENST00000608431 CDC42BPGQ6DT37 1551 aa8.89□□□□□ -0.99
LINC00649-213ENST00000608431 METP08581 1390 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 TRIM37O94972 964 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
LINC00649-213ENST00000608431 SHANK3Q9BYB0 1731 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 E9PCH4 1651 aa8.88□□□□□ -0.99
LINC00649-213ENST00000608431 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
LINC00649-213ENST00000608431 FOXO3O43524 673 aa8.87□□□□□ -0.99
LINC00649-213ENST00000608431 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
LINC00649-213ENST00000608431 SPOCK2Q92563 424 aa8.87□□□□□ -0.99
LINC00649-213ENST00000608431 SPATA31A3Q5VYP0 1347 aa8.86□□□□□ -0.99
LINC00649-213ENST00000608431 HSPA6P17066 643 aa8.86□□□□□ -0.99
LINC00649-213ENST00000608431 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
LINC00649-213ENST00000608431 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
LINC00649-213ENST00000608431 CCDC144AA2RUR9 1427 aa8.86□□□□□ -0.99
LINC00649-213ENST00000608431 ZEB1P37275 1124 aaPredicted RBP8.85□□□□□ -0.99
LINC00649-213ENST00000608431 SYT17Q9BSW7 474 aa8.85□□□□□ -0.99
LINC00649-213ENST00000608431 ANKRD30AQ9BXX3 1397 aa8.85□□□□□ -0.99
LINC00649-213ENST00000608431 HFM1A2PYH4 1435 aa8.84□□□□□ -0.99
LINC00649-213ENST00000608431 ABCC5O15440 1437 aa8.83□□□□□ -1
LINC00649-213ENST00000608431 PRAG1Q86YV5 1406 aa8.83□□□□□ -1
LINC00649-213ENST00000608431 SBF2Q86WG5 1849 aa8.83□□□□□ -1
LINC00649-213ENST00000608431 PRELPP51888 382 aa8.83□□□□□ -1
LINC00649-213ENST00000608431 TRIM26Q12899 539 aaPredicted RBP8.83□□□□□ -1
LINC00649-213ENST00000608431 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
LINC00649-213ENST00000608431 RGPD8O14715 1765 aaPredicted RBP8.83□□□□□ -1
LINC00649-213ENST00000608431 TNS3Q68CZ2 1445 aa8.82□□□□□ -1
LINC00649-213ENST00000608431 SPATA31A5Q5VU36 1347 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 SPATA31A7Q8IWB4 1347 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
LINC00649-213ENST00000608431 FMN2Q9NZ56 1722 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 PTGER2P43116 358 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 GPR162Q16538 588 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 BTG4Q9NY30 223 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 KIF1BO60333 1816 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 ROBO2Q9HCK4 1378 aa8.81□□□□□ -1
LINC00649-213ENST00000608431 DAPK1P53355 1430 aa8.8□□□□□ -1
LINC00649-213ENST00000608431 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
LINC00649-213ENST00000608431 KRT28Q7Z3Y7 464 aa8.8□□□□□ -1
LINC00649-213ENST00000608431 CLEC11AQ9Y240 323 aa8.8□□□□□ -1
LINC00649-213ENST00000608431 ARHGEF10O15013 1369 aa8.8□□□□□ -1
LINC00649-213ENST00000608431 MAP3K5Q99683 1374 aa8.8□□□□□ -1
LINC00649-213ENST00000608431 PITPNM1O00562 1244 aa8.79□□□□□ -1
LINC00649-213ENST00000608431 ZBTB7AO95365 584 aa8.79□□□□□ -1
LINC00649-213ENST00000608431 PSME1Q06323 249 aa8.79□□□□□ -1
LINC00649-213ENST00000608431 ZNF326Q5BKZ1 582 aaKnown RBP8.79□□□□□ -1
LINC00649-213ENST00000608431 CABLES1Q8TDN4 633 aa8.79□□□□□ -1
LINC00649-213ENST00000608431 PDE3BQ13370 1112 aa8.78□□□□□ -1
LINC00649-213ENST00000608431 TNS4Q8IZW8 715 aa8.78□□□□□ -1
LINC00649-213ENST00000608431 CREBZFQ9NS37 354 aa8.78□□□□□ -1
LINC00649-213ENST00000608431 IFT172Q9UG01 1749 aa8.77□□□□□ -1
LINC00649-213ENST00000608431 SBNO1A3KN83 1393 aa8.77□□□□□ -1.01
LINC00649-213ENST00000608431 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
LINC00649-213ENST00000608431 APLP1P51693 650 aa8.76□□□□□ -1.01
LINC00649-213ENST00000608431 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
LINC00649-213ENST00000608431 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
LINC00649-213ENST00000608431 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
LINC00649-213ENST00000608431 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
LINC00649-213ENST00000608431 NAIPQ13075 1403 aa8.76□□□□□ -1.01
LINC00649-213ENST00000608431 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
LINC00649-213ENST00000608431 PARP4Q9UKK3 1724 aaKnown RBP8.75□□□□□ -1.01
LINC00649-213ENST00000608431 PLSCR1O15162 318 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 PLEKHG5O94827 1062 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 PRR29P0C7W0 189 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 ARXQ96QS3 562 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 CHIC2Q9UKJ5 165 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
LINC00649-213ENST00000608431 AATKQ6ZMQ8 1374 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 WDR90Q96KV7 1748 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 CRYBG1Q9Y4K1 1723 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 ATP10DQ9P241 1426 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 BCL11BQ9C0K0 894 aaPredicted RBP8.74□□□□□ -1.01
LINC00649-213ENST00000608431 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
LINC00649-213ENST00000608431 ZBTB47Q9UFB7 747 aaPredicted RBP8.74□□□□□ -1.01
LINC00649-213ENST00000608431 ALS2Q96Q42 1657 aa8.74□□□□□ -1.01
LINC00649-213ENST00000608431 NUTM2FA1L443 756 aa8.73□□□□□ -1.01
LINC00649-213ENST00000608431 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
LINC00649-213ENST00000608431 NUBP1P53384 320 aa8.73□□□□□ -1.01
LINC00649-213ENST00000608431 SGIP1Q9BQI5 828 aa8.73□□□□□ -1.01
LINC00649-213ENST00000608431 PDGFDQ9GZP0 370 aaPredicted RBP8.73□□□□□ -1.01
LINC00649-213ENST00000608431 KNDC1Q76NI1 1749 aa8.72□□□□□ -1.01
LINC00649-213ENST00000608431 PEAK1Q9H792 1746 aa8.72□□□□□ -1.01
LINC00649-213ENST00000608431 TRPM3Q9HCF6 1732 aaPredicted RBP8.72□□□□□ -1.01
LINC00649-213ENST00000608431 AKAP12Q02952 1782 aa8.72□□□□□ -1.01
LINC00649-213ENST00000608431 STK32BQ9NY57 414 aa8.72□□□□□ -1.01
LINC00649-213ENST00000608431 COL24A1Q17RW2 1714 aa8.71□□□□□ -1.01
LINC00649-213ENST00000608431 VGFO15240 615 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms