RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
CTCFL-216ENST00000608263 FANCAO15360 1455 aa12.77□□□□□ -0.37
CTCFL-216ENST00000608263 GNAI1P63096 354 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 TEFQ10587 303 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
CTCFL-216ENST00000608263 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-216ENST00000608263 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 CAVIN1Q6NZI2 390 aaKnown RBP12.76□□□□□ -0.37
CTCFL-216ENST00000608263 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-216ENST00000608263 HMMRO75330 724 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
CTCFL-216ENST00000608263 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
CTCFL-216ENST00000608263 NOS1P29475 1434 aa12.75□□□□□ -0.37
CTCFL-216ENST00000608263 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
CTCFL-216ENST00000608263 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
CTCFL-216ENST00000608263 AAMPQ13685 434 aa12.75□□□□□ -0.37
CTCFL-216ENST00000608263 HSPA2P54652 639 aa12.74□□□□□ -0.37
CTCFL-216ENST00000608263 MIS18AQ9NYP9 233 aa12.74□□□□□ -0.37
CTCFL-216ENST00000608263 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
CTCFL-216ENST00000608263 CDC45O75419 566 aa12.74□□□□□ -0.37
CTCFL-216ENST00000608263 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
CTCFL-216ENST00000608263 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
CTCFL-216ENST00000608263 KIAA1211Q6ZU35 1233 aa12.73□□□□□ -0.37
CTCFL-216ENST00000608263 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-216ENST00000608263 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
CTCFL-216ENST00000608263 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-216ENST00000608263 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
CTCFL-216ENST00000608263 ASXL1Q8IXJ9 1541 aa12.73□□□□□ -0.37
CTCFL-216ENST00000608263 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
CTCFL-216ENST00000608263 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
CTCFL-216ENST00000608263 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-216ENST00000608263 FGD1P98174 961 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-216ENST00000608263 KDM5CP41229 1560 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 CHD1O14646 1710 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 FOXO3O43524 673 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-216ENST00000608263 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
CTCFL-216ENST00000608263 ADGRL2O95490 1459 aa12.71□□□□□ -0.37
CTCFL-216ENST00000608263 NEK4P51957 841 aa12.71□□□□□ -0.37
CTCFL-216ENST00000608263 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
CTCFL-216ENST00000608263 GOLGA6L4A6NEF3 574 aa12.71□□□□□ -0.38
CTCFL-216ENST00000608263 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.38
CTCFL-216ENST00000608263 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.38
CTCFL-216ENST00000608263 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
CTCFL-216ENST00000608263 SSFA2P28290 1259 aa12.7□□□□□ -0.38
CTCFL-216ENST00000608263 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
CTCFL-216ENST00000608263 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
CTCFL-216ENST00000608263 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-216ENST00000608263 PTMSP20962 102 aa12.7□□□□□ -0.38
CTCFL-216ENST00000608263 INTS3Q68E01 1043 aaKnown RBP12.7□□□□□ -0.38
CTCFL-216ENST00000608263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-216ENST00000608263 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
CTCFL-216ENST00000608263 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 REC8O95072 547 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-216ENST00000608263 MCM10Q7L590 875 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 NME9Q86XW9 330 aa12.69□□□□□ -0.38
CTCFL-216ENST00000608263 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-216ENST00000608263 C14orf93Q9H972 538 aaKnown RBP12.68□□□□□ -0.38
CTCFL-216ENST00000608263 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
CTCFL-216ENST00000608263 DRC7Q8IY82 874 aa12.68□□□□□ -0.38
CTCFL-216ENST00000608263 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
CTCFL-216ENST00000608263 ESPNB1AK53 854 aa12.68□□□□□ -0.38
CTCFL-216ENST00000608263 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
CTCFL-216ENST00000608263 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
CTCFL-216ENST00000608263 R3HCC1Q9Y3T6 440 aaKnown RBP12.67□□□□□ -0.38
CTCFL-216ENST00000608263 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
CTCFL-216ENST00000608263 FYB1O15117 783 aa12.67□□□□□ -0.38
CTCFL-216ENST00000608263 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-216ENST00000608263 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
CTCFL-216ENST00000608263 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
CTCFL-216ENST00000608263 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-216ENST00000608263 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 NUP160Q12769 1436 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 FCHSD2O94868 740 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 NUCB2P80303 420 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 F6X3S4 739 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 KIAA2012Q0VF49 1180 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 C16orf71Q8IYS4 520 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-216ENST00000608263 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
CTCFL-216ENST00000608263 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-216ENST00000608263 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
CTCFL-216ENST00000608263 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
CTCFL-216ENST00000608263 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
CTCFL-216ENST00000608263 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
CTCFL-216ENST00000608263 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
CTCFL-216ENST00000608263 KRT24Q2M2I5 525 aa12.65□□□□□ -0.39
CTCFL-216ENST00000608263 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms