RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
CTSA-211ENST00000606066 CCDC125Q86Z20 511 aa19.92■□□□□ 0.78
CTSA-211ENST00000606066 ACEP12821 1306 aa19.92■□□□□ 0.78
CTSA-211ENST00000606066 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
CTSA-211ENST00000606066 ATRNO75882 1429 aa19.91■□□□□ 0.78
CTSA-211ENST00000606066 PXDNQ92626 1479 aa19.91■□□□□ 0.78
CTSA-211ENST00000606066 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
CTSA-211ENST00000606066 ITSN1Q15811 1721 aa19.9■□□□□ 0.78
CTSA-211ENST00000606066 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
CTSA-211ENST00000606066 SBNO1A3KN83 1393 aa19.89■□□□□ 0.77
CTSA-211ENST00000606066 ZNF692Q9BU19 519 aaPredicted RBP19.89■□□□□ 0.77
CTSA-211ENST00000606066 SPATA31A3Q5VYP0 1347 aa19.88■□□□□ 0.77
CTSA-211ENST00000606066 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
CTSA-211ENST00000606066 NINLQ9Y2I6 1382 aa19.87■□□□□ 0.77
CTSA-211ENST00000606066 TOPAZ1Q8N9V7 1692 aa19.87■□□□□ 0.77
CTSA-211ENST00000606066 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
CTSA-211ENST00000606066 PAK3O75914 559 aaPredicted RBP19.86■□□□□ 0.77
CTSA-211ENST00000606066 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
CTSA-211ENST00000606066 LMOD2Q6P5Q4 547 aa19.85■□□□□ 0.77
CTSA-211ENST00000606066 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
CTSA-211ENST00000606066 ARHGEF10O15013 1369 aa19.84■□□□□ 0.77
CTSA-211ENST00000606066 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
CTSA-211ENST00000606066 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
CTSA-211ENST00000606066 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
CTSA-211ENST00000606066 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
CTSA-211ENST00000606066 EP400Q96L91 3159 aa19.83■□□□□ 0.76
CTSA-211ENST00000606066 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
CTSA-211ENST00000606066 USP6P35125 1406 aa19.8■□□□□ 0.76
CTSA-211ENST00000606066 CPSF1Q10570 1443 aaKnown RBP19.8■□□□□ 0.76
CTSA-211ENST00000606066 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
CTSA-211ENST00000606066 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
CTSA-211ENST00000606066 ABTB2Q8N961 1025 aa19.79■□□□□ 0.76
CTSA-211ENST00000606066 COL22A1Q8NFW1 1626 aaPredicted RBP19.79■□□□□ 0.76
CTSA-211ENST00000606066 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
CTSA-211ENST00000606066 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
CTSA-211ENST00000606066 ONECUT3O60422 494 aaPredicted RBP19.76■□□□□ 0.75
CTSA-211ENST00000606066 TTC21BQ7Z4L5 1316 aa19.76■□□□□ 0.75
CTSA-211ENST00000606066 A0A1W2PP64 1363 aa19.75■□□□□ 0.75
CTSA-211ENST00000606066 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
CTSA-211ENST00000606066 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
CTSA-211ENST00000606066 SSH2Q76I76 1423 aa19.75■□□□□ 0.75
CTSA-211ENST00000606066 CD163L1Q9NR16 1453 aa19.74■□□□□ 0.75
CTSA-211ENST00000606066 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
CTSA-211ENST00000606066 SLIT2O94813 1529 aa19.74■□□□□ 0.75
CTSA-211ENST00000606066 C11orf95C9JLR9 678 aaPredicted RBP19.73■□□□□ 0.75
CTSA-211ENST00000606066 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
CTSA-211ENST00000606066 VPS72Q15906 364 aa19.73■□□□□ 0.75
CTSA-211ENST00000606066 NLRP6P59044 892 aa19.72■□□□□ 0.75
CTSA-211ENST00000606066 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
CTSA-211ENST00000606066 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
CTSA-211ENST00000606066 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
CTSA-211ENST00000606066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
CTSA-211ENST00000606066 KIF7Q2M1P5 1343 aa19.71■□□□□ 0.75
CTSA-211ENST00000606066 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
CTSA-211ENST00000606066 ALS2Q96Q42 1657 aa19.7■□□□□ 0.74
CTSA-211ENST00000606066 BLMP54132 1417 aaPredicted RBP19.69■□□□□ 0.74
CTSA-211ENST00000606066 AKAP12Q02952 1782 aa19.68■□□□□ 0.74
CTSA-211ENST00000606066 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
CTSA-211ENST00000606066 USP19O94966 1318 aa19.66■□□□□ 0.74
CTSA-211ENST00000606066 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 GCP02774 474 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 NME9Q86XW9 330 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 KCNH5Q8NCM2 988 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 PANK3Q9H999 370 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 USP31Q70CQ4 1352 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
CTSA-211ENST00000606066 SF3B2Q13435 895 aaKnown RBP19.64■□□□□ 0.73
CTSA-211ENST00000606066 DEFB132Q7Z7B7 95 aa19.64■□□□□ 0.73
CTSA-211ENST00000606066 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
CTSA-211ENST00000606066 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
CTSA-211ENST00000606066 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
CTSA-211ENST00000606066 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
CTSA-211ENST00000606066 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
CTSA-211ENST00000606066 COG3Q96JB2 828 aa19.62■□□□□ 0.73
CTSA-211ENST00000606066 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
CTSA-211ENST00000606066 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
CTSA-211ENST00000606066 MYOM1P52179 1685 aa19.61■□□□□ 0.73
CTSA-211ENST00000606066 GLI3P10071 1580 aa19.61■□□□□ 0.73
CTSA-211ENST00000606066 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
CTSA-211ENST00000606066 PIK3C2AO00443 1686 aa19.6■□□□□ 0.73
CTSA-211ENST00000606066 FYB1O15117 783 aa19.6■□□□□ 0.73
CTSA-211ENST00000606066 CCDC9Q9Y3X0 531 aaKnown RBP19.6■□□□□ 0.73
CTSA-211ENST00000606066 CPDO75976 1380 aa19.58■□□□□ 0.73
CTSA-211ENST00000606066 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
CTSA-211ENST00000606066 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
CTSA-211ENST00000606066 SLIT3O75094 1523 aa19.57■□□□□ 0.72
CTSA-211ENST00000606066 SOX12O15370 315 aa19.57■□□□□ 0.72
CTSA-211ENST00000606066 GGNBP2Q9H3C7 697 aa19.57■□□□□ 0.72
CTSA-211ENST00000606066 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
CTSA-211ENST00000606066 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
CTSA-211ENST00000606066 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
CTSA-211ENST00000606066 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
CTSA-211ENST00000606066 ABCA3Q99758 1704 aa19.56■□□□□ 0.72
CTSA-211ENST00000606066 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
CTSA-211ENST00000606066 CRYBG1Q9Y4K1 1723 aa19.54■□□□□ 0.72
CTSA-211ENST00000606066 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
CTSA-211ENST00000606066 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
CTSA-211ENST00000606066 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
CTSA-211ENST00000606066 BAG6P46379 1132 aa19.53■□□□□ 0.72
CTSA-211ENST00000606066 FAM98CQ17RN3 349 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms