RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ZBTB7CA1YPR0 619 aa6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 APBB1O00213 710 aa6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 PDIA4P13667 645 aaKnown RBP6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 NUTM1Q86Y26 1132 aa6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 HLA-CQ95604 372 aa6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 GOPCQ9HD26 462 aa6.62□□□□□ -1.35
IGHV3-29-201ENST00000604817 FAM217BQ9NTX9 383 aaPredicted RBP6.61□□□□□ -1.35
IGHV3-29-201ENST00000604817 NXF1Q9UBU9 619 aaKnown RBP6.61□□□□□ -1.35
IGHV3-29-201ENST00000604817 WASF2Q9Y6W5 498 aa6.61□□□□□ -1.35
IGHV3-29-201ENST00000604817 SIAH2O43255 324 aa6.6□□□□□ -1.35
IGHV3-29-201ENST00000604817 GIGYF2Q6Y7W6 1299 aaKnown RBP6.6□□□□□ -1.35
IGHV3-29-201ENST00000604817 CAPN5O15484 640 aaPredicted RBP6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 CCNYL3P0C7X3 344 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 MS4A1P11836 297 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 GUCA2AQ02747 115 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 NACADO15069 1562 aa6.59□□□□□ -1.35
IGHV3-29-201ENST00000604817 FDX1P10109 184 aa6.58□□□□□ -1.36
IGHV3-29-201ENST00000604817 IRF7Q92985 503 aa6.58□□□□□ -1.36
IGHV3-29-201ENST00000604817 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
IGHV3-29-201ENST00000604817 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
IGHV3-29-201ENST00000604817 PTPRNQ16849 979 aa6.57□□□□□ -1.36
IGHV3-29-201ENST00000604817 PTCRAQ6ISU1 281 aaPredicted RBP6.57□□□□□ -1.36
IGHV3-29-201ENST00000604817 SYMPKQ92797 1274 aaKnown RBP6.57□□□□□ -1.36
IGHV3-29-201ENST00000604817 SH3BP2P78314 561 aa6.56□□□□□ -1.36
IGHV3-29-201ENST00000604817 TRIM46Q7Z4K8 759 aa6.56□□□□□ -1.36
IGHV3-29-201ENST00000604817 MPNDQ8N594 471 aa6.56□□□□□ -1.36
IGHV3-29-201ENST00000604817 SPDYE5A6NIY4 337 aa6.55□□□□□ -1.36
IGHV3-29-201ENST00000604817 BMP1P13497 986 aa6.55□□□□□ -1.36
IGHV3-29-201ENST00000604817 VARSP26640 1264 aaKnown RBP6.55□□□□□ -1.36
IGHV3-29-201ENST00000604817 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
IGHV3-29-201ENST00000604817 EVA1BQ9NVM1 165 aa6.55□□□□□ -1.36
IGHV3-29-201ENST00000604817 H3BM21 787 aa6.54□□□□□ -1.36
IGHV3-29-201ENST00000604817 DESI1Q6ICB0 168 aa6.54□□□□□ -1.36
IGHV3-29-201ENST00000604817 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
IGHV3-29-201ENST00000604817 PCDHGC3Q9UN70 934 aa6.54□□□□□ -1.36
IGHV3-29-201ENST00000604817 GMPRP36959 345 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 KCNH2Q12809 1159 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 FLIIQ13045 1269 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 DIXDC1Q155Q3 683 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 UNC13AQ9UPW8 1703 aa6.53□□□□□ -1.36
IGHV3-29-201ENST00000604817 SSTR3P32745 418 aaPredicted RBP6.52□□□□□ -1.37
IGHV3-29-201ENST00000604817 SCARF1Q14162 830 aa6.52□□□□□ -1.37
IGHV3-29-201ENST00000604817 ZNF511Q8NB15 262 aa6.52□□□□□ -1.37
IGHV3-29-201ENST00000604817 SPIRE2Q8WWL2 714 aa6.52□□□□□ -1.37
IGHV3-29-201ENST00000604817 PCMTD1Q96MG8 357 aaPredicted RBP6.52□□□□□ -1.37
IGHV3-29-201ENST00000604817 GJA5P36382 358 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 NNTQ13423 1086 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 MTMR2Q13614 643 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 CCDC82Q8N4S0 544 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 BAP1Q92560 729 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 ZFP42Q96MM3 310 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 TLL2Q9Y6L7 1015 aa6.51□□□□□ -1.37
IGHV3-29-201ENST00000604817 LOC105371045A0A1W2PR82 267 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 A6NJR5 290 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 TRAK2O60296 914 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 ADH1CP00326 375 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 PRR7Q8TB68 274 aa6.5□□□□□ -1.37
IGHV3-29-201ENST00000604817 BICRAQ9NZM4 1560 aa6.49□□□□□ -1.37
IGHV3-29-201ENST00000604817 SKIV2LQ15477 1246 aaKnown RBP6.49□□□□□ -1.37
IGHV3-29-201ENST00000604817 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
IGHV3-29-201ENST00000604817 BEGAINQ9BUH8 593 aa6.49□□□□□ -1.37
IGHV3-29-201ENST00000604817 TRAIPQ9BWF2 469 aa6.49□□□□□ -1.37
IGHV3-29-201ENST00000604817 MOXD2PA6NHM9 499 aa6.48□□□□□ -1.37
IGHV3-29-201ENST00000604817 NDUFV2P19404 249 aa6.48□□□□□ -1.37
IGHV3-29-201ENST00000604817 TIMP2P16035 220 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 VEGFBP49765 207 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 KCTD17Q8N5Z5 321 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 CLUAP1Q96AJ1 413 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 ERBB4Q15303 1308 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 CECR2Q9BXF3 1484 aa6.47□□□□□ -1.37
IGHV3-29-201ENST00000604817 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
IGHV3-29-201ENST00000604817 CTHP32929 405 aa6.46□□□□□ -1.38
IGHV3-29-201ENST00000604817 LYPD8Q6UX82 237 aa6.46□□□□□ -1.38
IGHV3-29-201ENST00000604817 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
IGHV3-29-201ENST00000604817 PURBQ96QR8 312 aaKnown RBP6.46□□□□□ -1.38
IGHV3-29-201ENST00000604817 RGS22Q8NE09 1264 aa6.45□□□□□ -1.38
IGHV3-29-201ENST00000604817 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
IGHV3-29-201ENST00000604817 NR5A1Q13285 461 aa6.44□□□□□ -1.38
IGHV3-29-201ENST00000604817 CC2D2AQ9P2K1 1620 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 RAD21O60216 631 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 MAN1A2O60476 641 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 UPP2O95045 317 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 TUSC1Q2TAM9 212 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 MYSM1Q5VVJ2 828 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 RSBN1LQ6PCB5 846 aaPredicted RBP6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
IGHV3-29-201ENST00000604817 MYO15BQ96JP2 1530 aa6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 ZIC2O95409 532 aaPredicted RBP6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 F12P00748 615 aaPredicted RBP6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 CLK2P49760 499 aaKnown RBP6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 PRPF38BQ5VTL8 546 aaKnown RBP6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 BPHLQ86WA6 291 aaPredicted RBP6.42□□□□□ -1.38
IGHV3-29-201ENST00000604817 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms