RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 FANCAO15360 1455 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 NUCB1Q02818 461 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 TMEM57Q8N5G2 664 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 CIZ1Q9ULV3 898 aaPredicted RBP19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 ESPNB1AK53 854 aa19.15■□□□□ 0.66
LYSMD4-211ENST00000604213 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
LYSMD4-211ENST00000604213 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
LYSMD4-211ENST00000604213 ANKRD36BQ8N2N9 1353 aa19.15■□□□□ 0.66
LYSMD4-211ENST00000604213 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
LYSMD4-211ENST00000604213 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.66
LYSMD4-211ENST00000604213 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
LYSMD4-211ENST00000604213 GAS2L3Q86XJ1 694 aa19.14■□□□□ 0.65
LYSMD4-211ENST00000604213 IL16Q14005 1332 aa19.13■□□□□ 0.65
LYSMD4-211ENST00000604213 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
LYSMD4-211ENST00000604213 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
LYSMD4-211ENST00000604213 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
LYSMD4-211ENST00000604213 ABCA9Q8IUA7 1624 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 HSP90AB1P08238 724 aaKnown RBP19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 GBP4Q96PP9 640 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 KIF2CQ99661 725 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 LNPKQ9C0E8 428 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 PPLO60437 1756 aa19.12■□□□□ 0.65
LYSMD4-211ENST00000604213 TULP4Q9NRJ4 1543 aa19.11■□□□□ 0.65
LYSMD4-211ENST00000604213 CHD1LQ86WJ1 897 aa19.11■□□□□ 0.65
LYSMD4-211ENST00000604213 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 SKOR2Q2VWA4 1001 aaPredicted RBP19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 IPO8O15397 1037 aaKnown RBP19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 RRP9O43818 475 aaKnown RBP19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
LYSMD4-211ENST00000604213 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
LYSMD4-211ENST00000604213 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.64
LYSMD4-211ENST00000604213 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.64
LYSMD4-211ENST00000604213 PTMSP20962 102 aa19.07■□□□□ 0.64
LYSMD4-211ENST00000604213 CD2BP2O95400 341 aaKnown RBP19.07■□□□□ 0.64
LYSMD4-211ENST00000604213 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 RIPK4P57078 832 aa19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 RPGRIP1LQ68CZ1 1315 aa19.06■□□□□ 0.64
LYSMD4-211ENST00000604213 GLI2P10070 1586 aa19.05■□□□□ 0.64
LYSMD4-211ENST00000604213 NPATQ14207 1427 aa19.04■□□□□ 0.64
LYSMD4-211ENST00000604213 K7ELQ4 463 aaPredicted RBP19.04■□□□□ 0.64
LYSMD4-211ENST00000604213 A0A1W2PP64 1363 aa19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 KIDINS220Q9ULH0 1771 aa19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 MED14O60244 1454 aa19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
LYSMD4-211ENST00000604213 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.64
LYSMD4-211ENST00000604213 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.64
LYSMD4-211ENST00000604213 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
LYSMD4-211ENST00000604213 BRPF1P55201 1214 aaPredicted RBP19.01■□□□□ 0.63
LYSMD4-211ENST00000604213 CLEC17AQ6ZS10 378 aa19.01■□□□□ 0.63
LYSMD4-211ENST00000604213 GCC1Q96CN9 775 aa19.01■□□□□ 0.63
LYSMD4-211ENST00000604213 SSFA2P28290 1259 aa19.01■□□□□ 0.63
LYSMD4-211ENST00000604213 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
LYSMD4-211ENST00000604213 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
LYSMD4-211ENST00000604213 PPP1R9BQ96SB3 815 aa19■□□□□ 0.63
LYSMD4-211ENST00000604213 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
LYSMD4-211ENST00000604213 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
LYSMD4-211ENST00000604213 FYB1O15117 783 aa18.98■□□□□ 0.63
LYSMD4-211ENST00000604213 TPM2P07951 284 aa18.98■□□□□ 0.63
LYSMD4-211ENST00000604213 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 ZNF428Q96B54 188 aa18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 IBTKQ9P2D0 1353 aaPredicted RBP18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 C1orf115Q9H7X2 142 aa18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
LYSMD4-211ENST00000604213 BAG4O95429 457 aaKnown RBP18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 NASPP49321 788 aaPredicted RBP18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 KLHL40Q2TBA0 621 aa18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 SIRT2Q8IXJ6 389 aa18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 GOLGA6L22H0YM25 854 aa18.96■□□□□ 0.63
LYSMD4-211ENST00000604213 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
LYSMD4-211ENST00000604213 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
LYSMD4-211ENST00000604213 CHMP4BQ9H444 224 aaKnown RBP18.95■□□□□ 0.62
LYSMD4-211ENST00000604213 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
LYSMD4-211ENST00000604213 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
LYSMD4-211ENST00000604213 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
LYSMD4-211ENST00000604213 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
LYSMD4-211ENST00000604213 CDC45O75419 566 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 SRPK2P78362 688 aaKnown RBP18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 ZSCAN30Q86W11 494 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 PKNOX2Q96KN3 472 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 VAMP4O75379 141 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 FCHSD2O94868 740 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
LYSMD4-211ENST00000604213 CD163L1Q9NR16 1453 aa18.92■□□□□ 0.62
LYSMD4-211ENST00000604213 ZMYND15Q9H091 742 aa18.92■□□□□ 0.62
LYSMD4-211ENST00000604213 NEXMIFQ5QGS0 1516 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms