RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 MSH6P52701 1360 aa17.15■□□□□ 0.34
HERPUD2-207ENST00000603731 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
HERPUD2-207ENST00000603731 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
HERPUD2-207ENST00000603731 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.33
HERPUD2-207ENST00000603731 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
HERPUD2-207ENST00000603731 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
HERPUD2-207ENST00000603731 NSD2O96028 1365 aa17.13■□□□□ 0.33
HERPUD2-207ENST00000603731 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
HERPUD2-207ENST00000603731 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
HERPUD2-207ENST00000603731 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
HERPUD2-207ENST00000603731 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
HERPUD2-207ENST00000603731 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
HERPUD2-207ENST00000603731 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
HERPUD2-207ENST00000603731 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
HERPUD2-207ENST00000603731 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
HERPUD2-207ENST00000603731 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
HERPUD2-207ENST00000603731 AFF2P51816 1311 aa17.1■□□□□ 0.33
HERPUD2-207ENST00000603731 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
HERPUD2-207ENST00000603731 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
HERPUD2-207ENST00000603731 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 ACEP12821 1306 aa17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
HERPUD2-207ENST00000603731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
HERPUD2-207ENST00000603731 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
HERPUD2-207ENST00000603731 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
HERPUD2-207ENST00000603731 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
HERPUD2-207ENST00000603731 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
HERPUD2-207ENST00000603731 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
HERPUD2-207ENST00000603731 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
HERPUD2-207ENST00000603731 FYB1O15117 783 aa17.04■□□□□ 0.32
HERPUD2-207ENST00000603731 ATF3P18847 181 aa17.04■□□□□ 0.32
HERPUD2-207ENST00000603731 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
HERPUD2-207ENST00000603731 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
HERPUD2-207ENST00000603731 USP6P35125 1406 aa17.03■□□□□ 0.32
HERPUD2-207ENST00000603731 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.32
HERPUD2-207ENST00000603731 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.32
HERPUD2-207ENST00000603731 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
HERPUD2-207ENST00000603731 EP400Q96L91 3159 aa17.01■□□□□ 0.31
HERPUD2-207ENST00000603731 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
HERPUD2-207ENST00000603731 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
HERPUD2-207ENST00000603731 DCCP43146 1447 aa17.01■□□□□ 0.31
HERPUD2-207ENST00000603731 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
HERPUD2-207ENST00000603731 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
HERPUD2-207ENST00000603731 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
HERPUD2-207ENST00000603731 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
HERPUD2-207ENST00000603731 NME9Q86XW9 330 aa16.99■□□□□ 0.31
HERPUD2-207ENST00000603731 COG3Q96JB2 828 aa16.99■□□□□ 0.31
HERPUD2-207ENST00000603731 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
HERPUD2-207ENST00000603731 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
HERPUD2-207ENST00000603731 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
HERPUD2-207ENST00000603731 C8orf37Q96NL8 207 aa16.97■□□□□ 0.31
HERPUD2-207ENST00000603731 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
HERPUD2-207ENST00000603731 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
HERPUD2-207ENST00000603731 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
HERPUD2-207ENST00000603731 MTHFSP49914 203 aa16.95■□□□□ 0.3
HERPUD2-207ENST00000603731 PSME1Q06323 249 aa16.95■□□□□ 0.3
HERPUD2-207ENST00000603731 MST1RQ04912 1400 aa16.95■□□□□ 0.3
HERPUD2-207ENST00000603731 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
HERPUD2-207ENST00000603731 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
HERPUD2-207ENST00000603731 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
HERPUD2-207ENST00000603731 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
HERPUD2-207ENST00000603731 LRP5O75197 1615 aa16.92■□□□□ 0.3
HERPUD2-207ENST00000603731 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
HERPUD2-207ENST00000603731 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
HERPUD2-207ENST00000603731 OVOS2A0A0J9YW53 1432 aa16.9■□□□□ 0.3
HERPUD2-207ENST00000603731 OVOS2Q6IE36 1432 aa16.9■□□□□ 0.3
HERPUD2-207ENST00000603731 FOXO3O43524 673 aa16.9■□□□□ 0.3
HERPUD2-207ENST00000603731 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.3
HERPUD2-207ENST00000603731 USP31Q70CQ4 1352 aa16.89■□□□□ 0.3
HERPUD2-207ENST00000603731 NHSL1Q5SYE7 1610 aa16.89■□□□□ 0.29
HERPUD2-207ENST00000603731 NLRP6P59044 892 aa16.89■□□□□ 0.29
HERPUD2-207ENST00000603731 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
HERPUD2-207ENST00000603731 INSRP06213 1382 aa16.89■□□□□ 0.29
HERPUD2-207ENST00000603731 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
HERPUD2-207ENST00000603731 KRT28Q7Z3Y7 464 aa16.88■□□□□ 0.29
HERPUD2-207ENST00000603731 NUDCQ9Y266 331 aa16.88■□□□□ 0.29
HERPUD2-207ENST00000603731 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
HERPUD2-207ENST00000603731 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
HERPUD2-207ENST00000603731 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
HERPUD2-207ENST00000603731 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
HERPUD2-207ENST00000603731 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
HERPUD2-207ENST00000603731 FBLN1P23142 703 aa16.85■□□□□ 0.29
HERPUD2-207ENST00000603731 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
HERPUD2-207ENST00000603731 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
HERPUD2-207ENST00000603731 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
HERPUD2-207ENST00000603731 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
HERPUD2-207ENST00000603731 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
HERPUD2-207ENST00000603731 SOX12O15370 315 aa16.84■□□□□ 0.29
HERPUD2-207ENST00000603731 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
HERPUD2-207ENST00000603731 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
HERPUD2-207ENST00000603731 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
HERPUD2-207ENST00000603731 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
HERPUD2-207ENST00000603731 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.28
HERPUD2-207ENST00000603731 ZBED9Q6R2W3 1325 aa16.83■□□□□ 0.28
HERPUD2-207ENST00000603731 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
HERPUD2-207ENST00000603731 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.28
HERPUD2-207ENST00000603731 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms