RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NUCKS1Q9H1E3 243 aaKnown RBP10.78□□□□□ -0.68
COMMD3-215ENST00000602574 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
COMMD3-215ENST00000602574 JRKLQ9Y4A0 524 aa10.78□□□□□ -0.68
COMMD3-215ENST00000602574 ZMYM3Q14202 1370 aa10.77□□□□□ -0.68
COMMD3-215ENST00000602574 CUX1P39880 1505 aa10.77□□□□□ -0.68
COMMD3-215ENST00000602574 CTTNBP2Q8WZ74 1663 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 BIRC2Q13490 618 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.69
COMMD3-215ENST00000602574 MYBPC2Q14324 1141 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 KRT222Q8N1A0 295 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.69
COMMD3-215ENST00000602574 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
COMMD3-215ENST00000602574 CTNNA3Q9UI47 895 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 RPS6KL1Q9Y6S9 549 aa10.77□□□□□ -0.69
COMMD3-215ENST00000602574 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 RAD54L2Q9Y4B4 1467 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 C1QTNF12Q5T7M4 302 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 ARMCX6Q7L4S7 300 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 SDR16C5Q8N3Y7 309 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 FAM53CQ9NYF3 392 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
COMMD3-215ENST00000602574 MAP9Q49MG5 647 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 DEF6Q9H4E7 631 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 THOC2Q8NI27 1593 aaKnown RBP10.75□□□□□ -0.69
COMMD3-215ENST00000602574 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 DNAJC21Q5F1R6 531 aaKnown RBP10.75□□□□□ -0.69
COMMD3-215ENST00000602574 DIAPH3Q9NSV4 1193 aa10.75□□□□□ -0.69
COMMD3-215ENST00000602574 H0YHG0 523 aa10.74□□□□□ -0.69
COMMD3-215ENST00000602574 HNRNPH2P55795 449 aaKnown RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 SARNPP82979 210 aaKnown RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 TNPO1Q92973 898 aaKnown RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 SUDS3Q9H7L9 328 aaPredicted RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
COMMD3-215ENST00000602574 TPM3P06753 285 aa10.74□□□□□ -0.69
COMMD3-215ENST00000602574 ZNF445P59923 1031 aa10.74□□□□□ -0.69
COMMD3-215ENST00000602574 FAM177A1Q8N128 213 aaPredicted RBP10.74□□□□□ -0.69
COMMD3-215ENST00000602574 SMC3Q9UQE7 1217 aa10.74□□□□□ -0.69
COMMD3-215ENST00000602574 ANKRD18BA2A2Z9 1011 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 CD151P48509 253 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 DNAJC14Q6Y2X3 702 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-215ENST00000602574 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 CEP89Q96ST8 783 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 IRX1P78414 480 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-215ENST00000602574 TSGA10IPQ3SY00 556 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 PRKRIP1Q9H875 184 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-215ENST00000602574 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 KDM5BQ9UGL1 1544 aa10.73□□□□□ -0.69
COMMD3-215ENST00000602574 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
COMMD3-215ENST00000602574 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
COMMD3-215ENST00000602574 ZSCAN26Q16670 478 aa10.72□□□□□ -0.69
COMMD3-215ENST00000602574 JAKMIP3Q5VZ66 844 aa10.72□□□□□ -0.69
COMMD3-215ENST00000602574 ATG3Q9NT62 314 aa10.72□□□□□ -0.69
COMMD3-215ENST00000602574 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
COMMD3-215ENST00000602574 CASKIN1Q8WXD9 1431 aa10.71□□□□□ -0.69
COMMD3-215ENST00000602574 PAX7P23759 505 aa10.71□□□□□ -0.69
COMMD3-215ENST00000602574 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
COMMD3-215ENST00000602574 RABEP1Q15276 862 aa10.71□□□□□ -0.69
COMMD3-215ENST00000602574 NOM1Q5C9Z4 860 aaKnown RBP10.71□□□□□ -0.69
COMMD3-215ENST00000602574 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.69
COMMD3-215ENST00000602574 SPTLC3Q9NUV7 552 aa10.71□□□□□ -0.69
COMMD3-215ENST00000602574 EIF3JO75822 258 aaKnown RBP10.7□□□□□ -0.7
COMMD3-215ENST00000602574 SCP2P22307 547 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 MCTP2Q6DN12 878 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 DDX46Q7L014 1031 aaKnown RBP10.7□□□□□ -0.7
COMMD3-215ENST00000602574 TXLNBQ8N3L3 684 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 GBP4Q96PP9 640 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 MYO1CO00159 1063 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 ERCC3P19447 782 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 NOLC1Q14978 699 aaKnown RBP eCLIP10.7□□□□□ -0.7
COMMD3-215ENST00000602574 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
COMMD3-215ENST00000602574 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
COMMD3-215ENST00000602574 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
COMMD3-215ENST00000602574 CWC15Q9P013 229 aaKnown RBP10.69□□□□□ -0.7
COMMD3-215ENST00000602574 PPP2R5AQ15172 486 aa10.69□□□□□ -0.7
COMMD3-215ENST00000602574 CT47B1P0C2W7 299 aaPredicted RBP10.68□□□□□ -0.7
COMMD3-215ENST00000602574 MAP2K2P36507 400 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 TTC31Q49AM3 519 aaPredicted RBP10.68□□□□□ -0.7
COMMD3-215ENST00000602574 KLHL23Q8NBE8 558 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 KIF18AQ8NI77 898 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 POLD1P28340 1107 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 INHBEP58166 350 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 CCDC97Q96F63 343 aaPredicted RBP10.68□□□□□ -0.7
COMMD3-215ENST00000602574 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
COMMD3-215ENST00000602574 NCOA1Q15788 1441 aa10.67□□□□□ -0.7
COMMD3-215ENST00000602574 CDC37Q16543 378 aaPredicted RBP10.67□□□□□ -0.7
COMMD3-215ENST00000602574 CCDC184Q52MB2 194 aa10.67□□□□□ -0.7
COMMD3-215ENST00000602574 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms