RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 VPS72Q15906 364 aa13.09□□□□□ -0.31
FARP1-234ENST00000601361 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
FARP1-234ENST00000601361 KIAA1210Q9ULL0 1709 aa13.09□□□□□ -0.31
FARP1-234ENST00000601361 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
FARP1-234ENST00000601361 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
FARP1-234ENST00000601361 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
FARP1-234ENST00000601361 COL14A1Q05707 1796 aaKnown RBP13.08□□□□□ -0.32
FARP1-234ENST00000601361 NEUROD1Q13562 356 aa13.08□□□□□ -0.32
FARP1-234ENST00000601361 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
FARP1-234ENST00000601361 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
FARP1-234ENST00000601361 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
FARP1-234ENST00000601361 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
FARP1-234ENST00000601361 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
FARP1-234ENST00000601361 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
FARP1-234ENST00000601361 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
FARP1-234ENST00000601361 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
FARP1-234ENST00000601361 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
FARP1-234ENST00000601361 PRR36Q9H6K5 1346 aa13.05□□□□□ -0.32
FARP1-234ENST00000601361 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
FARP1-234ENST00000601361 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
FARP1-234ENST00000601361 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
FARP1-234ENST00000601361 BAG6P46379 1132 aa13.03□□□□□ -0.32
FARP1-234ENST00000601361 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
FARP1-234ENST00000601361 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
FARP1-234ENST00000601361 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
FARP1-234ENST00000601361 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
FARP1-234ENST00000601361 ATP7BP35670 1465 aa13.02□□□□□ -0.33
FARP1-234ENST00000601361 QRICH2Q9H0J4 1663 aa13□□□□□ -0.33
FARP1-234ENST00000601361 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
FARP1-234ENST00000601361 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
FARP1-234ENST00000601361 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
FARP1-234ENST00000601361 R3HDM1Q15032 1099 aaKnown RBP12.99□□□□□ -0.33
FARP1-234ENST00000601361 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
FARP1-234ENST00000601361 CHD4Q14839 1912 aa12.99□□□□□ -0.33
FARP1-234ENST00000601361 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
FARP1-234ENST00000601361 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
FARP1-234ENST00000601361 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
FARP1-234ENST00000601361 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
FARP1-234ENST00000601361 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
FARP1-234ENST00000601361 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
FARP1-234ENST00000601361 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
FARP1-234ENST00000601361 UTRNP46939 3433 aa12.97□□□□□ -0.33
FARP1-234ENST00000601361 ACEP12821 1306 aa12.97□□□□□ -0.33
FARP1-234ENST00000601361 A0A0G2JS52 829 aa12.97□□□□□ -0.33
FARP1-234ENST00000601361 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
FARP1-234ENST00000601361 MYT1Q01538 1121 aa12.97□□□□□ -0.33
FARP1-234ENST00000601361 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
FARP1-234ENST00000601361 TONSLQ96HA7 1378 aa12.96□□□□□ -0.33
FARP1-234ENST00000601361 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
FARP1-234ENST00000601361 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
FARP1-234ENST00000601361 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
FARP1-234ENST00000601361 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
FARP1-234ENST00000601361 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
FARP1-234ENST00000601361 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
FARP1-234ENST00000601361 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
FARP1-234ENST00000601361 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 YY1P25490 414 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
FARP1-234ENST00000601361 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
FARP1-234ENST00000601361 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
FARP1-234ENST00000601361 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
FARP1-234ENST00000601361 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
FARP1-234ENST00000601361 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
FARP1-234ENST00000601361 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
FARP1-234ENST00000601361 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
FARP1-234ENST00000601361 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
FARP1-234ENST00000601361 CABP1Q9NZU7 370 aa12.91□□□□□ -0.34
FARP1-234ENST00000601361 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
FARP1-234ENST00000601361 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
FARP1-234ENST00000601361 CHRNA2Q15822 529 aa12.9□□□□□ -0.34
FARP1-234ENST00000601361 STRN4Q9NRL3 753 aa12.9□□□□□ -0.34
FARP1-234ENST00000601361 WNK3Q9BYP7 1800 aa12.9□□□□□ -0.34
FARP1-234ENST00000601361 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
FARP1-234ENST00000601361 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
FARP1-234ENST00000601361 MYOM1P52179 1685 aa12.89□□□□□ -0.35
FARP1-234ENST00000601361 EVA1CP58658 441 aa12.88□□□□□ -0.35
FARP1-234ENST00000601361 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
FARP1-234ENST00000601361 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
FARP1-234ENST00000601361 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
FARP1-234ENST00000601361 USP6P35125 1406 aa12.87□□□□□ -0.35
FARP1-234ENST00000601361 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
FARP1-234ENST00000601361 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
FARP1-234ENST00000601361 TRIM37O94972 964 aa12.86□□□□□ -0.35
FARP1-234ENST00000601361 NLRP6P59044 892 aa12.86□□□□□ -0.35
FARP1-234ENST00000601361 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
FARP1-234ENST00000601361 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
FARP1-234ENST00000601361 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
FARP1-234ENST00000601361 GCP02774 474 aa12.84□□□□□ -0.35
FARP1-234ENST00000601361 TMC1Q8TDI8 760 aa12.84□□□□□ -0.35
FARP1-234ENST00000601361 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
FARP1-234ENST00000601361 USP19O94966 1318 aa12.84□□□□□ -0.35
FARP1-234ENST00000601361 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
FARP1-234ENST00000601361 CPDO75976 1380 aa12.82□□□□□ -0.36
FARP1-234ENST00000601361 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
FARP1-234ENST00000601361 APBA3O96018 575 aa12.82□□□□□ -0.36
FARP1-234ENST00000601361 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms