RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
FARP1-230ENST00000600380 KTN1Q86UP2 1357 aaKnown RBP16.46■□□□□ 0.23
FARP1-230ENST00000600380 AKAP12Q02952 1782 aa16.46■□□□□ 0.22
FARP1-230ENST00000600380 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
FARP1-230ENST00000600380 LMOD2Q6P5Q4 547 aa16.45■□□□□ 0.22
FARP1-230ENST00000600380 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
FARP1-230ENST00000600380 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
FARP1-230ENST00000600380 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
FARP1-230ENST00000600380 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
FARP1-230ENST00000600380 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
FARP1-230ENST00000600380 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
FARP1-230ENST00000600380 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
FARP1-230ENST00000600380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
FARP1-230ENST00000600380 PANK3Q9H999 370 aa16.43■□□□□ 0.22
FARP1-230ENST00000600380 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
FARP1-230ENST00000600380 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
FARP1-230ENST00000600380 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
FARP1-230ENST00000600380 NME9Q86XW9 330 aa16.42■□□□□ 0.22
FARP1-230ENST00000600380 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
FARP1-230ENST00000600380 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
FARP1-230ENST00000600380 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
FARP1-230ENST00000600380 LRP6O75581 1613 aa16.41■□□□□ 0.22
FARP1-230ENST00000600380 ABTB2Q8N961 1025 aa16.41■□□□□ 0.22
FARP1-230ENST00000600380 EDC4Q6P2E9 1401 aaKnown RBP16.4■□□□□ 0.22
FARP1-230ENST00000600380 COL22A1Q8NFW1 1626 aaPredicted RBP16.4■□□□□ 0.22
FARP1-230ENST00000600380 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
FARP1-230ENST00000600380 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
FARP1-230ENST00000600380 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
FARP1-230ENST00000600380 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
FARP1-230ENST00000600380 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
FARP1-230ENST00000600380 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
FARP1-230ENST00000600380 NLRP6P59044 892 aa16.37■□□□□ 0.21
FARP1-230ENST00000600380 USP19O94966 1318 aa16.37■□□□□ 0.21
FARP1-230ENST00000600380 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
FARP1-230ENST00000600380 FYB1O15117 783 aa16.36■□□□□ 0.21
FARP1-230ENST00000600380 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
FARP1-230ENST00000600380 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
FARP1-230ENST00000600380 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
FARP1-230ENST00000600380 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
FARP1-230ENST00000600380 CRYBG1Q9Y4K1 1723 aa16.34■□□□□ 0.21
FARP1-230ENST00000600380 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
FARP1-230ENST00000600380 ABCA3Q99758 1704 aa16.33■□□□□ 0.21
FARP1-230ENST00000600380 FBLN1P23142 703 aa16.33■□□□□ 0.2
FARP1-230ENST00000600380 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
FARP1-230ENST00000600380 GCP02774 474 aa16.32■□□□□ 0.2
FARP1-230ENST00000600380 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
FARP1-230ENST00000600380 OVOS2A0A0J9YW53 1432 aa16.31■□□□□ 0.2
FARP1-230ENST00000600380 OVOS2Q6IE36 1432 aa16.31■□□□□ 0.2
FARP1-230ENST00000600380 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
FARP1-230ENST00000600380 SOX12O15370 315 aa16.31■□□□□ 0.2
FARP1-230ENST00000600380 SLIT3O75094 1523 aa16.3■□□□□ 0.2
FARP1-230ENST00000600380 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
FARP1-230ENST00000600380 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
FARP1-230ENST00000600380 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
FARP1-230ENST00000600380 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
FARP1-230ENST00000600380 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
FARP1-230ENST00000600380 CHRNA2Q15822 529 aa16.29■□□□□ 0.2
FARP1-230ENST00000600380 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
FARP1-230ENST00000600380 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
FARP1-230ENST00000600380 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
FARP1-230ENST00000600380 MEX3CQ5U5Q3 659 aaKnown RBP16.28■□□□□ 0.2
FARP1-230ENST00000600380 NFAT5O94916 1531 aa16.28■□□□□ 0.2
FARP1-230ENST00000600380 USP54Q70EL1 1684 aa16.27■□□□□ 0.2
FARP1-230ENST00000600380 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
FARP1-230ENST00000600380 COG3Q96JB2 828 aa16.27■□□□□ 0.2
FARP1-230ENST00000600380 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
FARP1-230ENST00000600380 NGLY1Q96IV0 654 aa16.26■□□□□ 0.19
FARP1-230ENST00000600380 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
FARP1-230ENST00000600380 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
FARP1-230ENST00000600380 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
FARP1-230ENST00000600380 CPDO75976 1380 aa16.25■□□□□ 0.19
FARP1-230ENST00000600380 AFF2P51816 1311 aa16.24■□□□□ 0.19
FARP1-230ENST00000600380 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
FARP1-230ENST00000600380 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
FARP1-230ENST00000600380 PRDM11Q9NQV5 511 aa16.24■□□□□ 0.19
FARP1-230ENST00000600380 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
FARP1-230ENST00000600380 CC2D1BQ5T0F9 858 aaKnown RBP16.23■□□□□ 0.19
FARP1-230ENST00000600380 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
FARP1-230ENST00000600380 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
FARP1-230ENST00000600380 BCL9LQ86UU0 1499 aa16.22■□□□□ 0.19
FARP1-230ENST00000600380 RRS1Q15050 365 aaKnown RBP16.22■□□□□ 0.19
FARP1-230ENST00000600380 SLIT2O94813 1529 aa16.22■□□□□ 0.19
FARP1-230ENST00000600380 MAP3K19Q56UN5 1328 aa16.21■□□□□ 0.19
FARP1-230ENST00000600380 POTEAQ6S8J7 498 aa16.21■□□□□ 0.19
FARP1-230ENST00000600380 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
FARP1-230ENST00000600380 CAMTA1Q9Y6Y1 1673 aa16.21■□□□□ 0.18
FARP1-230ENST00000600380 COL18A1P39060 1754 aa16.21■□□□□ 0.18
FARP1-230ENST00000600380 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
FARP1-230ENST00000600380 NSD2O96028 1365 aa16.19■□□□□ 0.18
FARP1-230ENST00000600380 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
FARP1-230ENST00000600380 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
FARP1-230ENST00000600380 USP21Q9UK80 565 aa16.19■□□□□ 0.18
FARP1-230ENST00000600380 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
FARP1-230ENST00000600380 COL14A1Q05707 1796 aaKnown RBP16.18■□□□□ 0.18
FARP1-230ENST00000600380 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
FARP1-230ENST00000600380 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
FARP1-230ENST00000600380 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
FARP1-230ENST00000600380 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
FARP1-230ENST00000600380 ANKRD26Q9UPS8 1709 aa16.17■□□□□ 0.18
FARP1-230ENST00000600380 UNC5CLQ8IV45 518 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms