RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TNS3Q68CZ2 1445 aa30.51■■■□□ 2.47
CHMP2A-204ENST00000597848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.51■■■□□ 2.47
CHMP2A-204ENST00000597848 JCADQ9P266 1359 aa30.51■■■□□ 2.47
CHMP2A-204ENST00000597848 TTC21BQ7Z4L5 1316 aa30.5■■■□□ 2.47
CHMP2A-204ENST00000597848 MYOM1P52179 1685 aa30.49■■■□□ 2.47
CHMP2A-204ENST00000597848 PLEKHG5O94827 1062 aa30.49■■■□□ 2.47
CHMP2A-204ENST00000597848 ABTB2Q8N961 1025 aa30.49■■■□□ 2.47
CHMP2A-204ENST00000597848 AKAP12Q02952 1782 aa30.49■■■□□ 2.47
CHMP2A-204ENST00000597848 NUTM2GQ5VZR2 741 aa30.48■■■□□ 2.47
CHMP2A-204ENST00000597848 ARHGEF10O15013 1369 aa30.47■■■□□ 2.47
CHMP2A-204ENST00000597848 EDC4Q6P2E9 1401 aaKnown RBP30.47■■■□□ 2.47
CHMP2A-204ENST00000597848 SSH2Q76I76 1423 aa30.47■■■□□ 2.47
CHMP2A-204ENST00000597848 PNPLA6Q8IY17 1366 aa30.46■■■□□ 2.47
CHMP2A-204ENST00000597848 ZNF316A6NFI3 1004 aaPredicted RBP30.46■■■□□ 2.47
CHMP2A-204ENST00000597848 CARD14Q9BXL6 1004 aa30.46■■■□□ 2.47
CHMP2A-204ENST00000597848 TTC21AQ8NDW8 1320 aa30.46■■■□□ 2.47
CHMP2A-204ENST00000597848 TRPM3Q9HCF6 1732 aaPredicted RBP30.45■■■□□ 2.47
CHMP2A-204ENST00000597848 MON2Q7Z3U7 1717 aa30.42■■■□□ 2.46
CHMP2A-204ENST00000597848 NLRP6P59044 892 aa30.42■■■□□ 2.46
CHMP2A-204ENST00000597848 NSD3Q9BZ95 1437 aa30.41■■■□□ 2.46
CHMP2A-204ENST00000597848 NUTM2BA6NNL0 878 aaPredicted RBP30.41■■■□□ 2.46
CHMP2A-204ENST00000597848 NUTM2EB1AL46 878 aaPredicted RBP30.41■■■□□ 2.46
CHMP2A-204ENST00000597848 NME9Q86XW9 330 aa30.41■■■□□ 2.46
CHMP2A-204ENST00000597848 NUTM2AQ8IVF1 878 aaPredicted RBP30.41■■■□□ 2.46
CHMP2A-204ENST00000597848 NLRP13Q86W25 1043 aa30.4■■■□□ 2.46
CHMP2A-204ENST00000597848 HAP1P54257 671 aaPredicted RBP30.39■■■□□ 2.46
CHMP2A-204ENST00000597848 CABLES1Q8TDN4 633 aa30.39■■■□□ 2.46
CHMP2A-204ENST00000597848 SPATA31A6Q5VVP1 1343 aa30.38■■■□□ 2.45
CHMP2A-204ENST00000597848 ZRANB1Q9UGI0 708 aa30.37■■■□□ 2.45
CHMP2A-204ENST00000597848 KNSTRNQ9Y448 316 aa30.37■■■□□ 2.45
CHMP2A-204ENST00000597848 NRKQ7Z2Y5 1582 aa30.37■■■□□ 2.45
CHMP2A-204ENST00000597848 ALS2Q96Q42 1657 aa30.36■■■□□ 2.45
CHMP2A-204ENST00000597848 SHPRHQ149N8 1683 aa30.35■■■□□ 2.45
CHMP2A-204ENST00000597848 CGNL1Q0VF96 1302 aa30.34■■■□□ 2.45
CHMP2A-204ENST00000597848 DDX10Q13206 875 aaKnown RBP30.34■■■□□ 2.45
CHMP2A-204ENST00000597848 FYB1O15117 783 aa30.33■■■□□ 2.45
CHMP2A-204ENST00000597848 GGNBP2Q9H3C7 697 aa30.32■■■□□ 2.44
CHMP2A-204ENST00000597848 COG3Q96JB2 828 aa30.31■■■□□ 2.44
CHMP2A-204ENST00000597848 COL22A1Q8NFW1 1626 aaPredicted RBP30.3■■■□□ 2.44
CHMP2A-204ENST00000597848 PIK3C2AO00443 1686 aa30.3■■■□□ 2.44
CHMP2A-204ENST00000597848 USP31Q70CQ4 1352 aa30.29■■■□□ 2.44
CHMP2A-204ENST00000597848 ADAMTS2O95450 1211 aa30.29■■■□□ 2.44
CHMP2A-204ENST00000597848 USP19O94966 1318 aa30.28■■■□□ 2.44
CHMP2A-204ENST00000597848 PER1O15534 1290 aaPredicted RBP30.28■■■□□ 2.44
CHMP2A-204ENST00000597848 SOX12O15370 315 aa30.27■■■□□ 2.44
CHMP2A-204ENST00000597848 MEX3CQ5U5Q3 659 aaKnown RBP30.27■■■□□ 2.44
CHMP2A-204ENST00000597848 GCP02774 474 aa30.26■■■□□ 2.43
CHMP2A-204ENST00000597848 MED1Q15648 1581 aaPredicted RBP30.26■■■□□ 2.43
CHMP2A-204ENST00000597848 KCNH5Q8NCM2 988 aa30.24■■■□□ 2.43
CHMP2A-204ENST00000597848 CNGB1Q14028 1251 aaPredicted RBP30.23■■■□□ 2.43
CHMP2A-204ENST00000597848 ZC3H6P61129 1189 aaKnown RBP30.22■■■□□ 2.43
CHMP2A-204ENST00000597848 LRP6O75581 1613 aa30.22■■■□□ 2.43
CHMP2A-204ENST00000597848 AMER1Q5JTC6 1135 aaPredicted RBP30.21■■■□□ 2.43
CHMP2A-204ENST00000597848 OVOS2A0A0J9YW53 1432 aa30.21■■■□□ 2.43
CHMP2A-204ENST00000597848 OVOS2Q6IE36 1432 aa30.21■■■□□ 2.43
CHMP2A-204ENST00000597848 ZBTB7CA1YPR0 619 aa30.2■■■□□ 2.43
CHMP2A-204ENST00000597848 CC2D1BQ5T0F9 858 aaKnown RBP30.2■■■□□ 2.43
CHMP2A-204ENST00000597848 NSD2O96028 1365 aa30.18■■■□□ 2.42
CHMP2A-204ENST00000597848 KIF20BQ96Q89 1820 aa30.18■■■□□ 2.42
CHMP2A-204ENST00000597848 C8orf37Q96NL8 207 aa30.18■■■□□ 2.42
CHMP2A-204ENST00000597848 SLIT3O75094 1523 aa30.17■■■□□ 2.42
CHMP2A-204ENST00000597848 MORC1Q86VD1 984 aa30.17■■■□□ 2.42
CHMP2A-204ENST00000597848 PRDM11Q9NQV5 511 aa30.17■■■□□ 2.42
CHMP2A-204ENST00000597848 NGLY1Q96IV0 654 aa30.16■■■□□ 2.42
CHMP2A-204ENST00000597848 PHRF1Q9P1Y6 1649 aaKnown RBP30.15■■■□□ 2.42
CHMP2A-204ENST00000597848 TNNT2P45379 298 aaPredicted RBP30.15■■■□□ 2.42
CHMP2A-204ENST00000597848 ABCA3Q99758 1704 aa30.15■■■□□ 2.42
CHMP2A-204ENST00000597848 KIAA0232Q92628 1395 aa30.15■■■□□ 2.42
CHMP2A-204ENST00000597848 CRYBG1Q9Y4K1 1723 aa30.14■■■□□ 2.42
CHMP2A-204ENST00000597848 MARF1Q9Y4F3 1742 aaKnown RBP30.13■■■□□ 2.41
CHMP2A-204ENST00000597848 FAM83GA6ND36 823 aa30.13■■■□□ 2.41
CHMP2A-204ENST00000597848 FBLN1P23142 703 aa30.13■■■□□ 2.41
CHMP2A-204ENST00000597848 USP54Q70EL1 1684 aa30.12■■■□□ 2.41
CHMP2A-204ENST00000597848 CHRNA2Q15822 529 aa30.12■■■□□ 2.41
CHMP2A-204ENST00000597848 NPC1L1Q9UHC9 1359 aa30.11■■■□□ 2.41
CHMP2A-204ENST00000597848 ARHGEF25Q86VW2 580 aa30.1■■■□□ 2.41
CHMP2A-204ENST00000597848 CPDO75976 1380 aa30.1■■■□□ 2.41
CHMP2A-204ENST00000597848 NFAT5O94916 1531 aa30.08■■■□□ 2.41
CHMP2A-204ENST00000597848 RRS1Q15050 365 aaKnown RBP30.07■■■□□ 2.4
CHMP2A-204ENST00000597848 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
CHMP2A-204ENST00000597848 AFF2P51816 1311 aa30.05■■■□□ 2.4
CHMP2A-204ENST00000597848 MAP3K19Q56UN5 1328 aa30.04■■■□□ 2.4
CHMP2A-204ENST00000597848 AMPHP49418 695 aa30.04■■■□□ 2.4
CHMP2A-204ENST00000597848 BTG4Q9NY30 223 aa30.04■■■□□ 2.4
CHMP2A-204ENST00000597848 ANKRD26Q9UPS8 1709 aa30.03■■■□□ 2.4
CHMP2A-204ENST00000597848 PPM1GO15355 546 aaPredicted RBP30.02■■■□□ 2.4
CHMP2A-204ENST00000597848 FNBP4Q8N3X1 1017 aaPredicted RBP30.02■■■□□ 2.4
CHMP2A-204ENST00000597848 USP21Q9UK80 565 aa30.02■■■□□ 2.4
CHMP2A-204ENST00000597848 AATKQ6ZMQ8 1374 aa30.02■■■□□ 2.4
CHMP2A-204ENST00000597848 EMILIN1Q9Y6C2 1016 aa30■■■□□ 2.39
CHMP2A-204ENST00000597848 EVA1CP58658 441 aa29.99■■■□□ 2.39
CHMP2A-204ENST00000597848 POLKQ9UBT6 870 aa29.99■■■□□ 2.39
CHMP2A-204ENST00000597848 COL14A1Q05707 1796 aaKnown RBP29.99■■■□□ 2.39
CHMP2A-204ENST00000597848 IP6K1Q92551 441 aa29.98■■■□□ 2.39
CHMP2A-204ENST00000597848 AXIN2Q9Y2T1 843 aa29.98■■■□□ 2.39
CHMP2A-204ENST00000597848 UNC5CLQ8IV45 518 aa29.97■■■□□ 2.39
CHMP2A-204ENST00000597848 STRN4Q9NRL3 753 aa29.97■■■□□ 2.39
CHMP2A-204ENST00000597848 SLIT2O94813 1529 aa29.96■■■□□ 2.39
CHMP2A-204ENST00000597848 HOXC9P31274 260 aa29.96■■■□□ 2.39
CHMP2A-204ENST00000597848 ZNF772Q68DY9 489 aaPredicted RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms