RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-208ENST00000597656 CDCA8Q53HL2 280 aa11.68□□□□□ -0.54
KHSRP-208ENST00000597656 PXDNQ92626 1479 aa11.68□□□□□ -0.54
KHSRP-208ENST00000597656 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
KHSRP-208ENST00000597656 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
KHSRP-208ENST00000597656 KIF1AQ12756 1690 aa11.67□□□□□ -0.54
KHSRP-208ENST00000597656 COL16A1Q07092 1604 aaPredicted RBP11.67□□□□□ -0.54
KHSRP-208ENST00000597656 SPATA31A6Q5VVP1 1343 aa11.66□□□□□ -0.54
KHSRP-208ENST00000597656 TMC1Q8TDI8 760 aa11.66□□□□□ -0.54
KHSRP-208ENST00000597656 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
KHSRP-208ENST00000597656 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
KHSRP-208ENST00000597656 RBM6P78332 1123 aaKnown RBP11.65□□□□□ -0.54
KHSRP-208ENST00000597656 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
KHSRP-208ENST00000597656 ITSN1Q15811 1721 aa11.65□□□□□ -0.54
KHSRP-208ENST00000597656 LRP6O75581 1613 aa11.64□□□□□ -0.55
KHSRP-208ENST00000597656 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
KHSRP-208ENST00000597656 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
KHSRP-208ENST00000597656 ZNF784Q8NCA9 323 aaPredicted RBP11.64□□□□□ -0.55
KHSRP-208ENST00000597656 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
KHSRP-208ENST00000597656 NINLQ9Y2I6 1382 aa11.64□□□□□ -0.55
KHSRP-208ENST00000597656 KIF7Q2M1P5 1343 aa11.63□□□□□ -0.55
KHSRP-208ENST00000597656 USP6P35125 1406 aa11.63□□□□□ -0.55
KHSRP-208ENST00000597656 SSH2Q76I76 1423 aa11.63□□□□□ -0.55
KHSRP-208ENST00000597656 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
KHSRP-208ENST00000597656 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
KHSRP-208ENST00000597656 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
KHSRP-208ENST00000597656 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
KHSRP-208ENST00000597656 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
KHSRP-208ENST00000597656 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
KHSRP-208ENST00000597656 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
KHSRP-208ENST00000597656 TNS3Q68CZ2 1445 aa11.61□□□□□ -0.55
KHSRP-208ENST00000597656 CAPN15O75808 1086 aa11.61□□□□□ -0.55
KHSRP-208ENST00000597656 HDGFL2Q7Z4V5 671 aaPredicted RBP11.61□□□□□ -0.55
KHSRP-208ENST00000597656 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
KHSRP-208ENST00000597656 AFF2P51816 1311 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 CCDC7Q96M83 1385 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
KHSRP-208ENST00000597656 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
KHSRP-208ENST00000597656 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
KHSRP-208ENST00000597656 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
KHSRP-208ENST00000597656 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
KHSRP-208ENST00000597656 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
KHSRP-208ENST00000597656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.56
KHSRP-208ENST00000597656 CABLES1Q8TDN4 633 aa11.58□□□□□ -0.56
KHSRP-208ENST00000597656 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
KHSRP-208ENST00000597656 MYOM1P52179 1685 aa11.58□□□□□ -0.56
KHSRP-208ENST00000597656 TTC21AQ8NDW8 1320 aa11.58□□□□□ -0.56
KHSRP-208ENST00000597656 SHPRHQ149N8 1683 aa11.57□□□□□ -0.56
KHSRP-208ENST00000597656 ALS2Q96Q42 1657 aa11.57□□□□□ -0.56
KHSRP-208ENST00000597656 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
KHSRP-208ENST00000597656 PANK3Q9H999 370 aa11.57□□□□□ -0.56
KHSRP-208ENST00000597656 AKAP12Q02952 1782 aa11.56□□□□□ -0.56
KHSRP-208ENST00000597656 NME9Q86XW9 330 aa11.56□□□□□ -0.56
KHSRP-208ENST00000597656 COL22A1Q8NFW1 1626 aaPredicted RBP11.56□□□□□ -0.56
KHSRP-208ENST00000597656 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
KHSRP-208ENST00000597656 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
KHSRP-208ENST00000597656 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
KHSRP-208ENST00000597656 NLRP6P59044 892 aa11.55□□□□□ -0.56
KHSRP-208ENST00000597656 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
KHSRP-208ENST00000597656 FYB1O15117 783 aa11.54□□□□□ -0.56
KHSRP-208ENST00000597656 USP19O94966 1318 aa11.54□□□□□ -0.56
KHSRP-208ENST00000597656 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
KHSRP-208ENST00000597656 NSD3Q9BZ95 1437 aa11.53□□□□□ -0.56
KHSRP-208ENST00000597656 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
KHSRP-208ENST00000597656 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
KHSRP-208ENST00000597656 GCP02774 474 aa11.53□□□□□ -0.56
KHSRP-208ENST00000597656 PIK3C2AO00443 1686 aa11.52□□□□□ -0.56
KHSRP-208ENST00000597656 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
KHSRP-208ENST00000597656 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
KHSRP-208ENST00000597656 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
KHSRP-208ENST00000597656 CGNL1Q0VF96 1302 aa11.51□□□□□ -0.57
KHSRP-208ENST00000597656 OVOS2A0A0J9YW53 1432 aa11.51□□□□□ -0.57
KHSRP-208ENST00000597656 OVOS2Q6IE36 1432 aa11.51□□□□□ -0.57
KHSRP-208ENST00000597656 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
KHSRP-208ENST00000597656 SF3B2Q13435 895 aaKnown RBP11.5□□□□□ -0.57
KHSRP-208ENST00000597656 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
KHSRP-208ENST00000597656 CRYBG1Q9Y4K1 1723 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
KHSRP-208ENST00000597656 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
KHSRP-208ENST00000597656 DEFB132Q7Z7B7 95 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 COG3Q96JB2 828 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 SLIT3O75094 1523 aa11.49□□□□□ -0.57
KHSRP-208ENST00000597656 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
KHSRP-208ENST00000597656 KCNH5Q8NCM2 988 aa11.48□□□□□ -0.57
KHSRP-208ENST00000597656 CPDO75976 1380 aa11.48□□□□□ -0.57
KHSRP-208ENST00000597656 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
KHSRP-208ENST00000597656 ABCA3Q99758 1704 aa11.48□□□□□ -0.57
KHSRP-208ENST00000597656 MARF1Q9Y4F3 1742 aaKnown RBP11.47□□□□□ -0.57
KHSRP-208ENST00000597656 PHRF1Q9P1Y6 1649 aaKnown RBP11.47□□□□□ -0.57
KHSRP-208ENST00000597656 SOX12O15370 315 aa11.47□□□□□ -0.57
KHSRP-208ENST00000597656 FBLN1P23142 703 aa11.47□□□□□ -0.57
KHSRP-208ENST00000597656 PRELPP51888 382 aa11.47□□□□□ -0.57
KHSRP-208ENST00000597656 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
KHSRP-208ENST00000597656 ARHGEF25Q86VW2 580 aa11.47□□□□□ -0.57
KHSRP-208ENST00000597656 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms