RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
CHERP-206ENST00000597261 TOPAZ1Q8N9V7 1692 aa23.06■■□□□ 1.28
CHERP-206ENST00000597261 TRPM3Q9HCF6 1732 aaPredicted RBP23.06■■□□□ 1.28
CHERP-206ENST00000597261 ABTB2Q8N961 1025 aa23.06■■□□□ 1.28
CHERP-206ENST00000597261 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 FAM83GA6ND36 823 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 SOCS7O14512 581 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
CHERP-206ENST00000597261 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 USP21Q9UK80 565 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 SSH2Q76I76 1423 aa23.05■■□□□ 1.28
CHERP-206ENST00000597261 PLEKHG5O94827 1062 aa23.04■■□□□ 1.28
CHERP-206ENST00000597261 RXRBP28702 533 aa23.04■■□□□ 1.28
CHERP-206ENST00000597261 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
CHERP-206ENST00000597261 USP6P35125 1406 aa23.02■■□□□ 1.28
CHERP-206ENST00000597261 TMF1P82094 1093 aa23.02■■□□□ 1.28
CHERP-206ENST00000597261 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
CHERP-206ENST00000597261 BCL9LQ86UU0 1499 aa23.01■■□□□ 1.27
CHERP-206ENST00000597261 NLRP13Q86W25 1043 aa23.01■■□□□ 1.27
CHERP-206ENST00000597261 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
CHERP-206ENST00000597261 ALS2Q96Q42 1657 aa23■■□□□ 1.27
CHERP-206ENST00000597261 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
CHERP-206ENST00000597261 TRPC5Q9UL62 973 aaPredicted RBP23■■□□□ 1.27
CHERP-206ENST00000597261 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
CHERP-206ENST00000597261 RBM6P78332 1123 aaKnown RBP22.99■■□□□ 1.27
CHERP-206ENST00000597261 SLIT2O94813 1529 aa22.98■■□□□ 1.27
CHERP-206ENST00000597261 CDCA8Q53HL2 280 aa22.97■■□□□ 1.27
CHERP-206ENST00000597261 USP19O94966 1318 aa22.97■■□□□ 1.27
CHERP-206ENST00000597261 GCP02774 474 aa22.96■■□□□ 1.27
CHERP-206ENST00000597261 NLRP6P59044 892 aa22.96■■□□□ 1.27
CHERP-206ENST00000597261 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
CHERP-206ENST00000597261 TERF2IPQ9NYB0 399 aa22.96■■□□□ 1.27
CHERP-206ENST00000597261 TTC21AQ8NDW8 1320 aa22.96■■□□□ 1.27
CHERP-206ENST00000597261 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
CHERP-206ENST00000597261 HDGFL2Q7Z4V5 671 aaPredicted RBP22.95■■□□□ 1.26
CHERP-206ENST00000597261 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.26
CHERP-206ENST00000597261 ATRNO75882 1429 aa22.94■■□□□ 1.26
CHERP-206ENST00000597261 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
CHERP-206ENST00000597261 GJD4Q96KN9 370 aaPredicted RBP22.93■■□□□ 1.26
CHERP-206ENST00000597261 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
CHERP-206ENST00000597261 ZC3H6P61129 1189 aaKnown RBP22.92■■□□□ 1.26
CHERP-206ENST00000597261 PRDM11Q9NQV5 511 aa22.92■■□□□ 1.26
CHERP-206ENST00000597261 VPS72Q15906 364 aa22.91■■□□□ 1.26
CHERP-206ENST00000597261 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
CHERP-206ENST00000597261 KIAA0232Q92628 1395 aa22.9■■□□□ 1.26
CHERP-206ENST00000597261 CPDO75976 1380 aa22.89■■□□□ 1.26
CHERP-206ENST00000597261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.89■■□□□ 1.25
CHERP-206ENST00000597261 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
CHERP-206ENST00000597261 A0A1W2PP64 1363 aa22.89■■□□□ 1.25
CHERP-206ENST00000597261 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
CHERP-206ENST00000597261 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
CHERP-206ENST00000597261 USP31Q70CQ4 1352 aa22.87■■□□□ 1.25
CHERP-206ENST00000597261 ONECUT3O60422 494 aaPredicted RBP22.86■■□□□ 1.25
CHERP-206ENST00000597261 ZRANB1Q9UGI0 708 aa22.86■■□□□ 1.25
CHERP-206ENST00000597261 EDC4Q6P2E9 1401 aaKnown RBP22.85■■□□□ 1.25
CHERP-206ENST00000597261 NME9Q86XW9 330 aa22.85■■□□□ 1.25
CHERP-206ENST00000597261 KCNH5Q8NCM2 988 aa22.85■■□□□ 1.25
CHERP-206ENST00000597261 ABCA3Q99758 1704 aa22.85■■□□□ 1.25
CHERP-206ENST00000597261 CRYBG1Q9Y4K1 1723 aa22.84■■□□□ 1.25
CHERP-206ENST00000597261 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
CHERP-206ENST00000597261 AKAP12Q02952 1782 aa22.83■■□□□ 1.24
CHERP-206ENST00000597261 ARHGEF25Q86VW2 580 aa22.82■■□□□ 1.24
CHERP-206ENST00000597261 C11orf95C9JLR9 678 aaPredicted RBP22.8■■□□□ 1.24
CHERP-206ENST00000597261 CARD14Q9BXL6 1004 aa22.8■■□□□ 1.24
CHERP-206ENST00000597261 SLIT3O75094 1523 aa22.8■■□□□ 1.24
CHERP-206ENST00000597261 AATKQ6ZMQ8 1374 aa22.79■■□□□ 1.24
CHERP-206ENST00000597261 COL14A1Q05707 1796 aaKnown RBP22.79■■□□□ 1.24
CHERP-206ENST00000597261 EVA1CP58658 441 aa22.79■■□□□ 1.24
CHERP-206ENST00000597261 RGS12O14924 1447 aa22.79■■□□□ 1.24
CHERP-206ENST00000597261 SPATA31A5Q5VU36 1347 aa22.79■■□□□ 1.24
CHERP-206ENST00000597261 SPATA31A7Q8IWB4 1347 aa22.79■■□□□ 1.24
CHERP-206ENST00000597261 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
CHERP-206ENST00000597261 CCDC9Q9Y3X0 531 aaKnown RBP22.78■■□□□ 1.24
CHERP-206ENST00000597261 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.24
CHERP-206ENST00000597261 NWD2Q9ULI1 1742 aa22.77■■□□□ 1.24
CHERP-206ENST00000597261 FYB1O15117 783 aa22.77■■□□□ 1.24
CHERP-206ENST00000597261 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
CHERP-206ENST00000597261 PHRF1Q9P1Y6 1649 aaKnown RBP22.77■■□□□ 1.24
CHERP-206ENST00000597261 MON2Q7Z3U7 1717 aa22.77■■□□□ 1.23
CHERP-206ENST00000597261 NRKQ7Z2Y5 1582 aa22.76■■□□□ 1.23
CHERP-206ENST00000597261 STRN4Q9NRL3 753 aa22.76■■□□□ 1.23
CHERP-206ENST00000597261 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
CHERP-206ENST00000597261 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
CHERP-206ENST00000597261 SOX12O15370 315 aa22.74■■□□□ 1.23
CHERP-206ENST00000597261 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
CHERP-206ENST00000597261 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
CHERP-206ENST00000597261 COG3Q96JB2 828 aa22.73■■□□□ 1.23
CHERP-206ENST00000597261 PLCH1Q4KWH8 1693 aa22.73■■□□□ 1.23
CHERP-206ENST00000597261 GLI3P10071 1580 aa22.72■■□□□ 1.23
CHERP-206ENST00000597261 ZBTB7CA1YPR0 619 aa22.72■■□□□ 1.23
CHERP-206ENST00000597261 FAM98CQ17RN3 349 aaKnown RBP22.71■■□□□ 1.23
CHERP-206ENST00000597261 UPF1Q92900 1129 aaKnown RBP eCLIP22.71■■□□□ 1.233e-6■■■□□ 17.1
CHERP-206ENST00000597261 POLR3GLQ9BT43 218 aa22.71■■□□□ 1.23
CHERP-206ENST00000597261 OVOS2A0A0J9YW53 1432 aa22.71■■□□□ 1.23
CHERP-206ENST00000597261 OVOS2Q6IE36 1432 aa22.71■■□□□ 1.23
CHERP-206ENST00000597261 NRAPQ86VF7 1730 aa22.69■■□□□ 1.22
CHERP-206ENST00000597261 NFAT5O94916 1531 aa22.69■■□□□ 1.22
CHERP-206ENST00000597261 BARGINQ6ZT62 677 aa22.69■■□□□ 1.22
CHERP-206ENST00000597261 GGNBP2Q9H3C7 697 aa22.69■■□□□ 1.22
CHERP-206ENST00000597261 PANK3Q9H999 370 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms