RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
ZNF548-203ENST00000594668 PANK3Q9H999 370 aa12.85□□□□□ -0.35
ZNF548-203ENST00000594668 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
ZNF548-203ENST00000594668 MARF1Q9Y4F3 1742 aaKnown RBP12.84□□□□□ -0.35
ZNF548-203ENST00000594668 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
ZNF548-203ENST00000594668 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.35
ZNF548-203ENST00000594668 PIK3C2AO00443 1686 aa12.83□□□□□ -0.35
ZNF548-203ENST00000594668 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
ZNF548-203ENST00000594668 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
ZNF548-203ENST00000594668 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
ZNF548-203ENST00000594668 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
ZNF548-203ENST00000594668 SHPRHQ149N8 1683 aa12.83□□□□□ -0.36
ZNF548-203ENST00000594668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
ZNF548-203ENST00000594668 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
ZNF548-203ENST00000594668 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
ZNF548-203ENST00000594668 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
ZNF548-203ENST00000594668 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
ZNF548-203ENST00000594668 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
ZNF548-203ENST00000594668 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
ZNF548-203ENST00000594668 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
ZNF548-203ENST00000594668 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
ZNF548-203ENST00000594668 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
ZNF548-203ENST00000594668 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
ZNF548-203ENST00000594668 NSD3Q9BZ95 1437 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-203ENST00000594668 NME9Q86XW9 330 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 PNPLA6Q8IY17 1366 aa12.79□□□□□ -0.36
ZNF548-203ENST00000594668 FYB1O15117 783 aa12.78□□□□□ -0.36
ZNF548-203ENST00000594668 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
ZNF548-203ENST00000594668 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
ZNF548-203ENST00000594668 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
ZNF548-203ENST00000594668 JCADQ9P266 1359 aa12.78□□□□□ -0.36
ZNF548-203ENST00000594668 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.36
ZNF548-203ENST00000594668 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
ZNF548-203ENST00000594668 NLRP6P59044 892 aa12.77□□□□□ -0.37
ZNF548-203ENST00000594668 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
ZNF548-203ENST00000594668 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
ZNF548-203ENST00000594668 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
ZNF548-203ENST00000594668 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
ZNF548-203ENST00000594668 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
ZNF548-203ENST00000594668 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
ZNF548-203ENST00000594668 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
ZNF548-203ENST00000594668 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-203ENST00000594668 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-203ENST00000594668 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-203ENST00000594668 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-203ENST00000594668 LTN1O94822 1766 aa12.74□□□□□ -0.37
ZNF548-203ENST00000594668 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
ZNF548-203ENST00000594668 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
ZNF548-203ENST00000594668 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
ZNF548-203ENST00000594668 SLIT3O75094 1523 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 USP19O94966 1318 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 FBLN1P23142 703 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 COG3Q96JB2 828 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 LRP6O75581 1613 aa12.72□□□□□ -0.37
ZNF548-203ENST00000594668 GCP02774 474 aa12.71□□□□□ -0.37
ZNF548-203ENST00000594668 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
ZNF548-203ENST00000594668 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
ZNF548-203ENST00000594668 SOX12O15370 315 aa12.7□□□□□ -0.38
ZNF548-203ENST00000594668 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
ZNF548-203ENST00000594668 NFAT5O94916 1531 aa12.7□□□□□ -0.38
ZNF548-203ENST00000594668 COL18A1P39060 1754 aa12.69□□□□□ -0.38
ZNF548-203ENST00000594668 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
ZNF548-203ENST00000594668 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
ZNF548-203ENST00000594668 NSD2O96028 1365 aa12.69□□□□□ -0.38
ZNF548-203ENST00000594668 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
ZNF548-203ENST00000594668 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
ZNF548-203ENST00000594668 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
ZNF548-203ENST00000594668 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
ZNF548-203ENST00000594668 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
ZNF548-203ENST00000594668 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
ZNF548-203ENST00000594668 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
ZNF548-203ENST00000594668 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
ZNF548-203ENST00000594668 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
ZNF548-203ENST00000594668 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
ZNF548-203ENST00000594668 ZBTB7CA1YPR0 619 aa12.65□□□□□ -0.38
ZNF548-203ENST00000594668 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
ZNF548-203ENST00000594668 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
ZNF548-203ENST00000594668 CPDO75976 1380 aa12.65□□□□□ -0.38
ZNF548-203ENST00000594668 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
ZNF548-203ENST00000594668 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
ZNF548-203ENST00000594668 C8orf37Q96NL8 207 aa12.64□□□□□ -0.39
ZNF548-203ENST00000594668 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
ZNF548-203ENST00000594668 NWD2Q9ULI1 1742 aa12.64□□□□□ -0.39
ZNF548-203ENST00000594668 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
ZNF548-203ENST00000594668 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
ZNF548-203ENST00000594668 EMILIN1Q9Y6C2 1016 aa12.62□□□□□ -0.39
ZNF548-203ENST00000594668 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
ZNF548-203ENST00000594668 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-203ENST00000594668 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms