RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SLC12A5Q9H2X9 1139 aa27.31■■□□□ 1.96
LSM4-203ENST00000593829 MEX3CQ5U5Q3 659 aaKnown RBP27.31■■□□□ 1.96
LSM4-203ENST00000593829 USP6P35125 1406 aa27.31■■□□□ 1.96
LSM4-203ENST00000593829 NINLQ9Y2I6 1382 aa27.31■■□□□ 1.96
LSM4-203ENST00000593829 ALS2Q96Q42 1657 aa27.3■■□□□ 1.96
LSM4-203ENST00000593829 CPSF1Q10570 1443 aaKnown RBP27.3■■□□□ 1.96
LSM4-203ENST00000593829 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
LSM4-203ENST00000593829 TERF2IPQ9NYB0 399 aa27.28■■□□□ 1.96
LSM4-203ENST00000593829 KTN1Q86UP2 1357 aaKnown RBP27.27■■□□□ 1.96
LSM4-203ENST00000593829 HDGFL2Q7Z4V5 671 aaPredicted RBP27.27■■□□□ 1.96
LSM4-203ENST00000593829 AKAP12Q02952 1782 aa27.27■■□□□ 1.96
LSM4-203ENST00000593829 ADAMTS2O95450 1211 aa27.26■■□□□ 1.95
LSM4-203ENST00000593829 CD163L1Q9NR16 1453 aa27.25■■□□□ 1.95
LSM4-203ENST00000593829 PLEKHG5O94827 1062 aa27.25■■□□□ 1.95
LSM4-203ENST00000593829 ABTB2Q8N961 1025 aa27.25■■□□□ 1.95
LSM4-203ENST00000593829 CABLES1Q8TDN4 633 aa27.25■■□□□ 1.95
LSM4-203ENST00000593829 SSH2Q76I76 1423 aa27.24■■□□□ 1.95
LSM4-203ENST00000593829 HAP1P54257 671 aaPredicted RBP27.24■■□□□ 1.95
LSM4-203ENST00000593829 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
LSM4-203ENST00000593829 TTC21BQ7Z4L5 1316 aa27.21■■□□□ 1.95
LSM4-203ENST00000593829 A0A1W2PP64 1363 aa27.21■■□□□ 1.95
LSM4-203ENST00000593829 C8orf37Q96NL8 207 aa27.2■■□□□ 1.95
LSM4-203ENST00000593829 MON2Q7Z3U7 1717 aa27.2■■□□□ 1.94
LSM4-203ENST00000593829 TTC21AQ8NDW8 1320 aa27.2■■□□□ 1.94
LSM4-203ENST00000593829 POLR3GLQ9BT43 218 aa27.19■■□□□ 1.94
LSM4-203ENST00000593829 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
LSM4-203ENST00000593829 ANKRD36BQ8N2N9 1353 aa27.18■■□□□ 1.94
LSM4-203ENST00000593829 NRKQ7Z2Y5 1582 aa27.17■■□□□ 1.94
LSM4-203ENST00000593829 NGLY1Q96IV0 654 aa27.17■■□□□ 1.94
LSM4-203ENST00000593829 EDC4Q6P2E9 1401 aaKnown RBP27.17■■□□□ 1.94
LSM4-203ENST00000593829 ABCA3Q99758 1704 aa27.17■■□□□ 1.94
LSM4-203ENST00000593829 RGS17Q9UGC6 210 aaPredicted RBP27.16■■□□□ 1.94
LSM4-203ENST00000593829 NLRP6P59044 892 aa27.16■■□□□ 1.94
LSM4-203ENST00000593829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.16■■□□□ 1.94
LSM4-203ENST00000593829 C11orf95C9JLR9 678 aaPredicted RBP27.15■■□□□ 1.94
LSM4-203ENST00000593829 AFF2P51816 1311 aa27.14■■□□□ 1.93
LSM4-203ENST00000593829 MARF1Q9Y4F3 1742 aaKnown RBP27.14■■□□□ 1.93
LSM4-203ENST00000593829 CRYBG1Q9Y4K1 1723 aa27.14■■□□□ 1.93
LSM4-203ENST00000593829 USP19O94966 1318 aa27.13■■□□□ 1.93
LSM4-203ENST00000593829 ZNF316A6NFI3 1004 aaPredicted RBP27.13■■□□□ 1.93
LSM4-203ENST00000593829 PIK3C2AO00443 1686 aa27.13■■□□□ 1.93
LSM4-203ENST00000593829 MYOM1P52179 1685 aa27.12■■□□□ 1.93
LSM4-203ENST00000593829 ZNF772Q68DY9 489 aaPredicted RBP27.12■■□□□ 1.93
LSM4-203ENST00000593829 FNBP4Q8N3X1 1017 aaPredicted RBP27.1■■□□□ 1.93
LSM4-203ENST00000593829 PHRF1Q9P1Y6 1649 aaKnown RBP27.1■■□□□ 1.93
LSM4-203ENST00000593829 NME9Q86XW9 330 aa27.08■■□□□ 1.93
LSM4-203ENST00000593829 GCP02774 474 aa27.08■■□□□ 1.93
LSM4-203ENST00000593829 KIF7Q2M1P5 1343 aa27.07■■□□□ 1.92
LSM4-203ENST00000593829 FAM83GA6ND36 823 aa27.06■■□□□ 1.92
LSM4-203ENST00000593829 GTF3C3Q9Y5Q9 886 aa27.06■■□□□ 1.92
LSM4-203ENST00000593829 USP31Q70CQ4 1352 aa27.06■■□□□ 1.92
LSM4-203ENST00000593829 USP21Q9UK80 565 aa27.06■■□□□ 1.92
LSM4-203ENST00000593829 ZC3H6P61129 1189 aaKnown RBP27.05■■□□□ 1.92
LSM4-203ENST00000593829 POTEAQ6S8J7 498 aa27.05■■□□□ 1.92
LSM4-203ENST00000593829 PRDM11Q9NQV5 511 aa27.05■■□□□ 1.92
LSM4-203ENST00000593829 SLIT3O75094 1523 aa27.05■■□□□ 1.92
LSM4-203ENST00000593829 ZRANB1Q9UGI0 708 aa27.04■■□□□ 1.92
LSM4-203ENST00000593829 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
LSM4-203ENST00000593829 CARD14Q9BXL6 1004 aa27.03■■□□□ 1.92
LSM4-203ENST00000593829 SLIT2O94813 1529 aa27.03■■□□□ 1.92
LSM4-203ENST00000593829 KCNH5Q8NCM2 988 aa27.02■■□□□ 1.92
LSM4-203ENST00000593829 BCL9LQ86UU0 1499 aa27.01■■□□□ 1.91
LSM4-203ENST00000593829 CPDO75976 1380 aa27.01■■□□□ 1.91
LSM4-203ENST00000593829 NSD3Q9BZ95 1437 aa27.01■■□□□ 1.91
LSM4-203ENST00000593829 QTRT2Q9H974 415 aaKnown RBP27■■□□□ 1.91
LSM4-203ENST00000593829 COL14A1Q05707 1796 aaKnown RBP27■■□□□ 1.91
LSM4-203ENST00000593829 USP54Q70EL1 1684 aa27■■□□□ 1.91
LSM4-203ENST00000593829 PANK3Q9H999 370 aa27■■□□□ 1.91
LSM4-203ENST00000593829 UNC5CLQ8IV45 518 aa26.99■■□□□ 1.91
LSM4-203ENST00000593829 CCDC7Q96M83 1385 aa26.99■■□□□ 1.91
LSM4-203ENST00000593829 CHRNA2Q15822 529 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 PLCH1Q4KWH8 1693 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 FYB1O15117 783 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 SOX12O15370 315 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 COG3Q96JB2 828 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 BTG4Q9NY30 223 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 TRPC5Q9UL62 973 aaPredicted RBP26.98■■□□□ 1.91
LSM4-203ENST00000593829 OVOS2A0A0J9YW53 1432 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 OVOS2Q6IE36 1432 aa26.98■■□□□ 1.91
LSM4-203ENST00000593829 WASHC2AQ641Q2 1341 aa26.97■■□□□ 1.91
LSM4-203ENST00000593829 NWD2Q9ULI1 1742 aa26.96■■□□□ 1.91
LSM4-203ENST00000593829 GGNBP2Q9H3C7 697 aa26.94■■□□□ 1.9
LSM4-203ENST00000593829 ATRNO75882 1429 aa26.94■■□□□ 1.9
LSM4-203ENST00000593829 ZBTB7CA1YPR0 619 aa26.94■■□□□ 1.9
LSM4-203ENST00000593829 ILDR2Q71H61 639 aa26.94■■□□□ 1.9
LSM4-203ENST00000593829 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.94■■□□□ 1.9
LSM4-203ENST00000593829 NFAT5O94916 1531 aa26.93■■□□□ 1.9
LSM4-203ENST00000593829 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
LSM4-203ENST00000593829 RXRBP28702 533 aa26.93■■□□□ 1.9
LSM4-203ENST00000593829 ARHGEF25Q86VW2 580 aa26.93■■□□□ 1.9
LSM4-203ENST00000593829 RBM6P78332 1123 aaKnown RBP26.91■■□□□ 1.9
LSM4-203ENST00000593829 MYT1Q01538 1121 aa26.91■■□□□ 1.9
LSM4-203ENST00000593829 KIF20BQ96Q89 1820 aa26.91■■□□□ 1.9
LSM4-203ENST00000593829 AATKQ6ZMQ8 1374 aa26.91■■□□□ 1.9
LSM4-203ENST00000593829 VPS72Q15906 364 aa26.89■■□□□ 1.9
LSM4-203ENST00000593829 NRAPQ86VF7 1730 aa26.88■■□□□ 1.89
LSM4-203ENST00000593829 LMO7Q8WWI1 1683 aa26.88■■□□□ 1.89
LSM4-203ENST00000593829 CAMTA1Q9Y6Y1 1673 aa26.87■■□□□ 1.89
LSM4-203ENST00000593829 GJD4Q96KN9 370 aaPredicted RBP26.87■■□□□ 1.89
LSM4-203ENST00000593829 KNSTRNQ9Y448 316 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms