RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
LINC01539-206ENST00000593282 NEUROD2Q15784 382 aa7.99□□□□□ -1.13
LINC01539-206ENST00000593282 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
LINC01539-206ENST00000593282 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
LINC01539-206ENST00000593282 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
LINC01539-206ENST00000593282 BMP1P13497 986 aa7.98□□□□□ -1.13
LINC01539-206ENST00000593282 DESI1Q6ICB0 168 aa7.98□□□□□ -1.13
LINC01539-206ENST00000593282 ZNF511Q8NB15 262 aa7.98□□□□□ -1.13
LINC01539-206ENST00000593282 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
LINC01539-206ENST00000593282 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
LINC01539-206ENST00000593282 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
LINC01539-206ENST00000593282 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
LINC01539-206ENST00000593282 PARP9Q8IXQ6 854 aa7.97□□□□□ -1.13
LINC01539-206ENST00000593282 ZBTB3Q9H5J0 574 aa7.97□□□□□ -1.13
LINC01539-206ENST00000593282 VARSP26640 1264 aaKnown RBP7.96□□□□□ -1.14
LINC01539-206ENST00000593282 CSPP1Q1MSJ5 1256 aa7.96□□□□□ -1.14
LINC01539-206ENST00000593282 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
LINC01539-206ENST00000593282 TSC1Q92574 1164 aa7.96□□□□□ -1.14
LINC01539-206ENST00000593282 TRIM66O15016 1216 aa7.95□□□□□ -1.14
LINC01539-206ENST00000593282 GJA5P36382 358 aa7.95□□□□□ -1.14
LINC01539-206ENST00000593282 AK7Q96M32 723 aa7.95□□□□□ -1.14
LINC01539-206ENST00000593282 NNTQ13423 1086 aa7.94□□□□□ -1.14
LINC01539-206ENST00000593282 AGERQ15109 404 aa7.94□□□□□ -1.14
LINC01539-206ENST00000593282 FAM174AQ8TBP5 190 aa7.94□□□□□ -1.14
LINC01539-206ENST00000593282 HRCP23327 699 aa7.93□□□□□ -1.14
LINC01539-206ENST00000593282 LYPD8Q6UX82 237 aa7.93□□□□□ -1.14
LINC01539-206ENST00000593282 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
LINC01539-206ENST00000593282 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
LINC01539-206ENST00000593282 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
LINC01539-206ENST00000593282 NUTM2BA6NNL0 878 aaPredicted RBP7.92□□□□□ -1.14
LINC01539-206ENST00000593282 NUTM2EB1AL46 878 aaPredicted RBP7.92□□□□□ -1.14
LINC01539-206ENST00000593282 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 SPTLC1O15269 473 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 WIPF1O43516 503 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 SCARF1Q14162 830 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
LINC01539-206ENST00000593282 NUTM2AQ8IVF1 878 aaPredicted RBP7.92□□□□□ -1.14
LINC01539-206ENST00000593282 MAP10Q9P2G4 905 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
LINC01539-206ENST00000593282 WDR4P57081 412 aaKnown RBP7.91□□□□□ -1.14
LINC01539-206ENST00000593282 CABLES1Q8TDN4 633 aa7.91□□□□□ -1.14
LINC01539-206ENST00000593282 NXF1Q9UBU9 619 aaKnown RBP7.91□□□□□ -1.14
LINC01539-206ENST00000593282 ADH1CP00326 375 aa7.9□□□□□ -1.14
LINC01539-206ENST00000593282 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
LINC01539-206ENST00000593282 MPNDQ8N594 471 aa7.89□□□□□ -1.15
LINC01539-206ENST00000593282 FOXJ1Q92949 421 aa7.89□□□□□ -1.15
LINC01539-206ENST00000593282 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
LINC01539-206ENST00000593282 GPBP1L1Q9HC44 474 aaPredicted RBP7.89□□□□□ -1.15
LINC01539-206ENST00000593282 MRPL14Q6P1L8 145 aaKnown RBP7.88□□□□□ -1.15
LINC01539-206ENST00000593282 IRF7Q92985 503 aa7.88□□□□□ -1.15
LINC01539-206ENST00000593282 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
LINC01539-206ENST00000593282 VEGFBP49765 207 aa7.87□□□□□ -1.15
LINC01539-206ENST00000593282 PDE4DQ08499 809 aa7.87□□□□□ -1.15
LINC01539-206ENST00000593282 BPHLQ86WA6 291 aaPredicted RBP7.87□□□□□ -1.15
LINC01539-206ENST00000593282 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
LINC01539-206ENST00000593282 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
LINC01539-206ENST00000593282 TIMP2P16035 220 aa7.86□□□□□ -1.15
LINC01539-206ENST00000593282 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
LINC01539-206ENST00000593282 MYSM1Q5VVJ2 828 aa7.86□□□□□ -1.15
LINC01539-206ENST00000593282 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
LINC01539-206ENST00000593282 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
LINC01539-206ENST00000593282 PER1O15534 1290 aaPredicted RBP7.85□□□□□ -1.15
LINC01539-206ENST00000593282 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
LINC01539-206ENST00000593282 NPAS3Q8IXF0 933 aa7.85□□□□□ -1.15
LINC01539-206ENST00000593282 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
LINC01539-206ENST00000593282 UPP2O95045 317 aa7.84□□□□□ -1.15
LINC01539-206ENST00000593282 UBTFP17480 764 aaKnown RBP7.84□□□□□ -1.15
LINC01539-206ENST00000593282 QPCTQ16769 361 aa7.84□□□□□ -1.15
LINC01539-206ENST00000593282 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
LINC01539-206ENST00000593282 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
LINC01539-206ENST00000593282 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
LINC01539-206ENST00000593282 GMPRP36959 345 aa7.83□□□□□ -1.16
LINC01539-206ENST00000593282 NR5A1Q13285 461 aa7.83□□□□□ -1.16
LINC01539-206ENST00000593282 C6orf118Q5T5N4 469 aa7.83□□□□□ -1.16
LINC01539-206ENST00000593282 MAGEB6P1A0A0J9YX57 407 aa7.82□□□□□ -1.16
LINC01539-206ENST00000593282 H3BM21 787 aa7.82□□□□□ -1.16
LINC01539-206ENST00000593282 CLK2P49760 499 aaKnown RBP7.82□□□□□ -1.16
LINC01539-206ENST00000593282 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
LINC01539-206ENST00000593282 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
LINC01539-206ENST00000593282 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
LINC01539-206ENST00000593282 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 MAN1A2O60476 641 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 LILRB3O75022 631 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 FSHRP23945 695 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 TRIM26Q12899 539 aaPredicted RBP7.81□□□□□ -1.16
LINC01539-206ENST00000593282 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 C4orf48Q5BLP8 95 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 VASH1Q7L8A9 365 aaPredicted RBP7.81□□□□□ -1.16
LINC01539-206ENST00000593282 ITPKCQ96DU7 683 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 RSPH6AQ9H0K4 717 aa7.81□□□□□ -1.16
LINC01539-206ENST00000593282 BMP2P12643 396 aa7.8□□□□□ -1.16
LINC01539-206ENST00000593282 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
LINC01539-206ENST00000593282 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
LINC01539-206ENST00000593282 POLR3EQ9NVU0 708 aa7.8□□□□□ -1.16
LINC01539-206ENST00000593282 NR3C2P08235 984 aa7.79□□□□□ -1.16
LINC01539-206ENST00000593282 RTL5Q5HYW3 569 aaPredicted RBP7.79□□□□□ -1.16
LINC01539-206ENST00000593282 NPM2Q86SE8 214 aaKnown RBP7.78□□□□□ -1.16
LINC01539-206ENST00000593282 KLF16Q9BXK1 252 aaPredicted RBP7.78□□□□□ -1.16
LINC01539-206ENST00000593282 GRM5P41594 1212 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms