RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 APAF1O14727 1248 aa15.77■□□□□ 0.12
NPC1-214ENST00000593280 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
NPC1-214ENST00000593280 IQSEC2Q5JU85 1478 aa15.77■□□□□ 0.11
NPC1-214ENST00000593280 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
NPC1-214ENST00000593280 FMN2Q9NZ56 1722 aa15.76■□□□□ 0.11
NPC1-214ENST00000593280 RGPD8O14715 1765 aaPredicted RBP15.76■□□□□ 0.11
NPC1-214ENST00000593280 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
NPC1-214ENST00000593280 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
NPC1-214ENST00000593280 KCNA6P17658 529 aa15.75■□□□□ 0.11
NPC1-214ENST00000593280 RUNDC1Q96C34 613 aa15.75■□□□□ 0.11
NPC1-214ENST00000593280 RCAN3Q9UKA8 241 aa15.75■□□□□ 0.11
NPC1-214ENST00000593280 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
NPC1-214ENST00000593280 PLEKHG3A1L390 1219 aa15.74■□□□□ 0.11
NPC1-214ENST00000593280 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
NPC1-214ENST00000593280 NME9Q86XW9 330 aa15.74■□□□□ 0.11
NPC1-214ENST00000593280 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
NPC1-214ENST00000593280 ACEP12821 1306 aa15.73■□□□□ 0.11
NPC1-214ENST00000593280 USP6P35125 1406 aa15.73■□□□□ 0.11
NPC1-214ENST00000593280 NUTM2FA1L443 756 aa15.72■□□□□ 0.11
NPC1-214ENST00000593280 PNPLA6Q8IY17 1366 aa15.72■□□□□ 0.11
NPC1-214ENST00000593280 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
NPC1-214ENST00000593280 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
NPC1-214ENST00000593280 COG3Q96JB2 828 aa15.72■□□□□ 0.11
NPC1-214ENST00000593280 PPP4R2Q9NY27 417 aa15.71■□□□□ 0.11
NPC1-214ENST00000593280 AATKQ6ZMQ8 1374 aa15.71■□□□□ 0.11
NPC1-214ENST00000593280 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.11
NPC1-214ENST00000593280 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
NPC1-214ENST00000593280 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
NPC1-214ENST00000593280 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
NPC1-214ENST00000593280 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
NPC1-214ENST00000593280 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
NPC1-214ENST00000593280 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
NPC1-214ENST00000593280 NWD1Q149M9 1564 aa15.69■□□□□ 0.1
NPC1-214ENST00000593280 SLFN5Q08AF3 891 aa15.68■□□□□ 0.1
NPC1-214ENST00000593280 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
NPC1-214ENST00000593280 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
NPC1-214ENST00000593280 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
NPC1-214ENST00000593280 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
NPC1-214ENST00000593280 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
NPC1-214ENST00000593280 E9PSI1 815 aa15.67■□□□□ 0.1
NPC1-214ENST00000593280 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
NPC1-214ENST00000593280 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
NPC1-214ENST00000593280 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
NPC1-214ENST00000593280 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
NPC1-214ENST00000593280 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
NPC1-214ENST00000593280 LRRC7Q96NW7 1537 aa15.66■□□□□ 0.1
NPC1-214ENST00000593280 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
NPC1-214ENST00000593280 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
NPC1-214ENST00000593280 PIK3C2AO00443 1686 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 FBLN1P23142 703 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
NPC1-214ENST00000593280 PMFBP1Q8TBY8 1022 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
NPC1-214ENST00000593280 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
NPC1-214ENST00000593280 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
NPC1-214ENST00000593280 PLEKHF1Q96S99 279 aa15.64■□□□□ 0.09
NPC1-214ENST00000593280 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
NPC1-214ENST00000593280 LMTK3Q96Q04 1460 aa15.63■□□□□ 0.09
NPC1-214ENST00000593280 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
NPC1-214ENST00000593280 USP54Q70EL1 1684 aa15.62■□□□□ 0.09
NPC1-214ENST00000593280 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
NPC1-214ENST00000593280 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
NPC1-214ENST00000593280 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
NPC1-214ENST00000593280 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
NPC1-214ENST00000593280 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
NPC1-214ENST00000593280 PEAK1Q9H792 1746 aa15.6■□□□□ 0.09
NPC1-214ENST00000593280 FCHSD2O94868 740 aa15.6■□□□□ 0.09
NPC1-214ENST00000593280 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
NPC1-214ENST00000593280 IL13P35225 146 aa15.59■□□□□ 0.09
NPC1-214ENST00000593280 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
NPC1-214ENST00000593280 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.09
NPC1-214ENST00000593280 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.09
NPC1-214ENST00000593280 NEFMP07197 916 aa15.57■□□□□ 0.08
NPC1-214ENST00000593280 C14orf37Q86TY3 774 aa15.57■□□□□ 0.08
NPC1-214ENST00000593280 RBM33Q96EV2 1170 aaKnown RBP15.57■□□□□ 0.08
NPC1-214ENST00000593280 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
NPC1-214ENST00000593280 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
NPC1-214ENST00000593280 PLIN1O60240 522 aa15.56■□□□□ 0.08
NPC1-214ENST00000593280 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.56■□□□□ 0.08
NPC1-214ENST00000593280 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
NPC1-214ENST00000593280 RGPD1P0DJD0 1748 aa15.55■□□□□ 0.08
NPC1-214ENST00000593280 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
NPC1-214ENST00000593280 HMOX1P09601 288 aa15.54■□□□□ 0.08
NPC1-214ENST00000593280 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
NPC1-214ENST00000593280 RIPK4P57078 832 aa15.54■□□□□ 0.08
NPC1-214ENST00000593280 PROSER2Q86WR7 435 aaPredicted RBP15.54■□□□□ 0.08
NPC1-214ENST00000593280 TRIM35Q9UPQ4 493 aa15.54■□□□□ 0.08
NPC1-214ENST00000593280 KIF1AQ12756 1690 aa15.53■□□□□ 0.08
NPC1-214ENST00000593280 STRCP1A6NGW2 1772 aa15.53■□□□□ 0.08
NPC1-214ENST00000593280 SOX12O15370 315 aa15.53■□□□□ 0.08
NPC1-214ENST00000593280 SBNO1A3KN83 1393 aa15.53■□□□□ 0.08
NPC1-214ENST00000593280 IL16Q14005 1332 aa15.52■□□□□ 0.08
NPC1-214ENST00000593280 DLG5Q8TDM6 1919 aa15.52■□□□□ 0.08
NPC1-214ENST00000593280 NLRP6P59044 892 aa15.52■□□□□ 0.08
NPC1-214ENST00000593280 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.08
NPC1-214ENST00000593280 FLT4P35916 1363 aa15.52■□□□□ 0.07
NPC1-214ENST00000593280 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
NPC1-214ENST00000593280 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms