RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-222ENST00000592320 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 PXDNQ92626 1479 aa16.68■□□□□ 0.26
GFAP-222ENST00000592320 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
GFAP-222ENST00000592320 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
GFAP-222ENST00000592320 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
GFAP-222ENST00000592320 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
GFAP-222ENST00000592320 FOXO3O43524 673 aa16.67■□□□□ 0.26
GFAP-222ENST00000592320 LRP5O75197 1615 aa16.67■□□□□ 0.26
GFAP-222ENST00000592320 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
GFAP-222ENST00000592320 GLI3P10071 1580 aa16.66■□□□□ 0.26
GFAP-222ENST00000592320 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
GFAP-222ENST00000592320 USP32Q8NFA0 1604 aa16.66■□□□□ 0.26
GFAP-222ENST00000592320 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
GFAP-222ENST00000592320 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
GFAP-222ENST00000592320 EP400Q96L91 3159 aa16.65■□□□□ 0.26
GFAP-222ENST00000592320 SLIT2O94813 1529 aa16.65■□□□□ 0.26
GFAP-222ENST00000592320 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
GFAP-222ENST00000592320 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
GFAP-222ENST00000592320 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
GFAP-222ENST00000592320 PHF8Q9UPP1 1060 aa16.63■□□□□ 0.25
GFAP-222ENST00000592320 TOPAZ1Q8N9V7 1692 aa16.62■□□□□ 0.25
GFAP-222ENST00000592320 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
GFAP-222ENST00000592320 PSDA5PKW4 1024 aaPredicted RBP16.61■□□□□ 0.25
GFAP-222ENST00000592320 ITSN1Q15811 1721 aa16.61■□□□□ 0.25
GFAP-222ENST00000592320 PMFBP1Q8TBY8 1022 aa16.6■□□□□ 0.25
GFAP-222ENST00000592320 BRWD3Q6RI45 1802 aa16.6■□□□□ 0.25
GFAP-222ENST00000592320 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
GFAP-222ENST00000592320 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
GFAP-222ENST00000592320 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
GFAP-222ENST00000592320 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 ACEP12821 1306 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 SPATA31A3Q5VYP0 1347 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
GFAP-222ENST00000592320 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 MYOM1P52179 1685 aa16.59■□□□□ 0.25
GFAP-222ENST00000592320 BAG6P46379 1132 aa16.58■□□□□ 0.24
GFAP-222ENST00000592320 VPS72Q15906 364 aa16.58■□□□□ 0.24
GFAP-222ENST00000592320 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
GFAP-222ENST00000592320 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
GFAP-222ENST00000592320 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
GFAP-222ENST00000592320 CPSF1Q10570 1443 aaKnown RBP16.57■□□□□ 0.24
GFAP-222ENST00000592320 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
GFAP-222ENST00000592320 PANK3Q9H999 370 aa16.57■□□□□ 0.24
GFAP-222ENST00000592320 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
GFAP-222ENST00000592320 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
GFAP-222ENST00000592320 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
GFAP-222ENST00000592320 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
GFAP-222ENST00000592320 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
GFAP-222ENST00000592320 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
GFAP-222ENST00000592320 A0A0G2JS52 829 aa16.54■□□□□ 0.24
GFAP-222ENST00000592320 MYT1Q01538 1121 aa16.54■□□□□ 0.24
GFAP-222ENST00000592320 USP6P35125 1406 aa16.53■□□□□ 0.24
GFAP-222ENST00000592320 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
GFAP-222ENST00000592320 PSME1Q06323 249 aa16.53■□□□□ 0.24
GFAP-222ENST00000592320 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
GFAP-222ENST00000592320 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
GFAP-222ENST00000592320 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
GFAP-222ENST00000592320 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
GFAP-222ENST00000592320 TNS3Q68CZ2 1445 aa16.51■□□□□ 0.23
GFAP-222ENST00000592320 NSD3Q9BZ95 1437 aa16.51■□□□□ 0.23
GFAP-222ENST00000592320 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
GFAP-222ENST00000592320 AKAP12Q02952 1782 aa16.5■□□□□ 0.23
GFAP-222ENST00000592320 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
GFAP-222ENST00000592320 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
GFAP-222ENST00000592320 R3HDM1Q15032 1099 aaKnown RBP16.49■□□□□ 0.23
GFAP-222ENST00000592320 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
GFAP-222ENST00000592320 KNSTRNQ9Y448 316 aa16.49■□□□□ 0.23
GFAP-222ENST00000592320 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
GFAP-222ENST00000592320 MON2Q7Z3U7 1717 aa16.48■□□□□ 0.23
GFAP-222ENST00000592320 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
GFAP-222ENST00000592320 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
GFAP-222ENST00000592320 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
GFAP-222ENST00000592320 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
GFAP-222ENST00000592320 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
GFAP-222ENST00000592320 FAM98CQ17RN3 349 aaKnown RBP16.47■□□□□ 0.23
GFAP-222ENST00000592320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.23
GFAP-222ENST00000592320 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
GFAP-222ENST00000592320 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
GFAP-222ENST00000592320 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
GFAP-222ENST00000592320 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
GFAP-222ENST00000592320 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
GFAP-222ENST00000592320 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
GFAP-222ENST00000592320 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
GFAP-222ENST00000592320 NSD2O96028 1365 aa16.43■□□□□ 0.22
GFAP-222ENST00000592320 RGPD1P0DJD0 1748 aa16.43■□□□□ 0.22
GFAP-222ENST00000592320 NME9Q86XW9 330 aa16.43■□□□□ 0.22
GFAP-222ENST00000592320 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
GFAP-222ENST00000592320 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
GFAP-222ENST00000592320 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
GFAP-222ENST00000592320 FYB1O15117 783 aa16.42■□□□□ 0.22
GFAP-222ENST00000592320 YY1P25490 414 aa16.42■□□□□ 0.22
GFAP-222ENST00000592320 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
GFAP-222ENST00000592320 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
GFAP-222ENST00000592320 DISP2A7MBM2 1401 aa16.41■□□□□ 0.22
GFAP-222ENST00000592320 USP31Q70CQ4 1352 aa16.4■□□□□ 0.22
GFAP-222ENST00000592320 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
GFAP-222ENST00000592320 NLRP6P59044 892 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms