RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 TRPM3Q9HCF6 1732 aaPredicted RBP13.58□□□□□ -0.24
TPM4-215ENST00000592138 USP6P35125 1406 aa13.57□□□□□ -0.24
TPM4-215ENST00000592138 SSH2Q76I76 1423 aa13.57□□□□□ -0.24
TPM4-215ENST00000592138 LRP6O75581 1613 aa13.57□□□□□ -0.24
TPM4-215ENST00000592138 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
TPM4-215ENST00000592138 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
TPM4-215ENST00000592138 TERF2IPQ9NYB0 399 aa13.55□□□□□ -0.24
TPM4-215ENST00000592138 ALS2Q96Q42 1657 aa13.55□□□□□ -0.24
TPM4-215ENST00000592138 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
TPM4-215ENST00000592138 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
TPM4-215ENST00000592138 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
TPM4-215ENST00000592138 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 A0A1W2PP64 1363 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 KTN1Q86UP2 1357 aaKnown RBP13.53□□□□□ -0.24
TPM4-215ENST00000592138 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
TPM4-215ENST00000592138 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
TPM4-215ENST00000592138 MON2Q7Z3U7 1717 aa13.52□□□□□ -0.25
TPM4-215ENST00000592138 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
TPM4-215ENST00000592138 MYOM1P52179 1685 aa13.5□□□□□ -0.25
TPM4-215ENST00000592138 EP400Q96L91 3159 aa13.5□□□□□ -0.25
TPM4-215ENST00000592138 TTC21BQ7Z4L5 1316 aa13.5□□□□□ -0.25
TPM4-215ENST00000592138 USP19O94966 1318 aa13.49□□□□□ -0.25
TPM4-215ENST00000592138 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
TPM4-215ENST00000592138 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
TPM4-215ENST00000592138 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
TPM4-215ENST00000592138 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
TPM4-215ENST00000592138 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
TPM4-215ENST00000592138 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
TPM4-215ENST00000592138 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
TPM4-215ENST00000592138 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
TPM4-215ENST00000592138 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
TPM4-215ENST00000592138 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
TPM4-215ENST00000592138 SLIT3O75094 1523 aa13.46□□□□□ -0.25
TPM4-215ENST00000592138 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
TPM4-215ENST00000592138 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
TPM4-215ENST00000592138 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
TPM4-215ENST00000592138 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
TPM4-215ENST00000592138 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
TPM4-215ENST00000592138 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
TPM4-215ENST00000592138 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
TPM4-215ENST00000592138 NLRP6P59044 892 aa13.44□□□□□ -0.26
TPM4-215ENST00000592138 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
TPM4-215ENST00000592138 OVOS2A0A0J9YW53 1432 aa13.44□□□□□ -0.26
TPM4-215ENST00000592138 OVOS2Q6IE36 1432 aa13.44□□□□□ -0.26
TPM4-215ENST00000592138 CPDO75976 1380 aa13.44□□□□□ -0.26
TPM4-215ENST00000592138 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
TPM4-215ENST00000592138 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
TPM4-215ENST00000592138 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
TPM4-215ENST00000592138 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
TPM4-215ENST00000592138 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
TPM4-215ENST00000592138 GCP02774 474 aa13.42□□□□□ -0.26
TPM4-215ENST00000592138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.42□□□□□ -0.26
TPM4-215ENST00000592138 FNBP4Q8N3X1 1017 aaPredicted RBP13.42□□□□□ -0.26
TPM4-215ENST00000592138 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
TPM4-215ENST00000592138 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
TPM4-215ENST00000592138 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
TPM4-215ENST00000592138 SLIT2O94813 1529 aa13.41□□□□□ -0.26
TPM4-215ENST00000592138 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
TPM4-215ENST00000592138 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
TPM4-215ENST00000592138 NME9Q86XW9 330 aa13.41□□□□□ -0.26
TPM4-215ENST00000592138 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
TPM4-215ENST00000592138 PANK3Q9H999 370 aa13.41□□□□□ -0.26
TPM4-215ENST00000592138 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
TPM4-215ENST00000592138 NSD2O96028 1365 aa13.4□□□□□ -0.26
TPM4-215ENST00000592138 NFAT5O94916 1531 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 ABCC6O95255 1503 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 FYB1O15117 783 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 COG3Q96JB2 828 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 COL14A1Q05707 1796 aaKnown RBP13.39□□□□□ -0.27
TPM4-215ENST00000592138 RGS12O14924 1447 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 AFF2P51816 1311 aa13.39□□□□□ -0.27
TPM4-215ENST00000592138 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
TPM4-215ENST00000592138 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
TPM4-215ENST00000592138 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
TPM4-215ENST00000592138 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
TPM4-215ENST00000592138 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
TPM4-215ENST00000592138 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
TPM4-215ENST00000592138 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
TPM4-215ENST00000592138 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
TPM4-215ENST00000592138 USP21Q9UK80 565 aa13.36□□□□□ -0.27
TPM4-215ENST00000592138 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
TPM4-215ENST00000592138 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 RXRBP28702 533 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 ZC3H6P61129 1189 aaKnown RBP13.35□□□□□ -0.27
TPM4-215ENST00000592138 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
TPM4-215ENST00000592138 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
TPM4-215ENST00000592138 ATRNO75882 1429 aa13.34□□□□□ -0.27
TPM4-215ENST00000592138 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
TPM4-215ENST00000592138 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
TPM4-215ENST00000592138 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.27
TPM4-215ENST00000592138 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms