RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DLC1Q96QB1 1528 aa15.29■□□□□ 0.04
VPS4B-207ENST00000591519 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
VPS4B-207ENST00000591519 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
VPS4B-207ENST00000591519 PSME1Q06323 249 aa15.28■□□□□ 0.04
VPS4B-207ENST00000591519 MARF1Q9Y4F3 1742 aaKnown RBP15.27■□□□□ 0.04
VPS4B-207ENST00000591519 POGKQ9P215 609 aa15.27■□□□□ 0.04
VPS4B-207ENST00000591519 ADGRB1O14514 1584 aa15.27■□□□□ 0.03
VPS4B-207ENST00000591519 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
VPS4B-207ENST00000591519 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
VPS4B-207ENST00000591519 GJD4Q96KN9 370 aaPredicted RBP15.26■□□□□ 0.03
VPS4B-207ENST00000591519 SBNO1A3KN83 1393 aa15.25■□□□□ 0.03
VPS4B-207ENST00000591519 SAFB2Q14151 953 aaKnown RBP eCLIP15.25■□□□□ 0.03
VPS4B-207ENST00000591519 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
VPS4B-207ENST00000591519 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
VPS4B-207ENST00000591519 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
VPS4B-207ENST00000591519 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
VPS4B-207ENST00000591519 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
VPS4B-207ENST00000591519 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
VPS4B-207ENST00000591519 SLIT2O94813 1529 aa15.23■□□□□ 0.03
VPS4B-207ENST00000591519 TNS3Q68CZ2 1445 aa15.22■□□□□ 0.03
VPS4B-207ENST00000591519 ADGRB2O60241 1585 aa15.22■□□□□ 0.03
VPS4B-207ENST00000591519 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
VPS4B-207ENST00000591519 ARHGEF10O15013 1369 aa15.21■□□□□ 0.02
VPS4B-207ENST00000591519 USP32Q8NFA0 1604 aa15.21■□□□□ 0.02
VPS4B-207ENST00000591519 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
VPS4B-207ENST00000591519 WASLO00401 505 aaPredicted RBP15.2■□□□□ 0.02
VPS4B-207ENST00000591519 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
VPS4B-207ENST00000591519 EIF3AQ14152 1382 aaKnown RBP15.2■□□□□ 0.02
VPS4B-207ENST00000591519 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
VPS4B-207ENST00000591519 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
VPS4B-207ENST00000591519 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
VPS4B-207ENST00000591519 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
VPS4B-207ENST00000591519 PRR36Q9H6K5 1346 aa15.18■□□□□ 0.02
VPS4B-207ENST00000591519 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
VPS4B-207ENST00000591519 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
VPS4B-207ENST00000591519 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
VPS4B-207ENST00000591519 VPS72Q15906 364 aa15.17■□□□□ 0.02
VPS4B-207ENST00000591519 LMOD2Q6P5Q4 547 aa15.16■□□□□ 0.02
VPS4B-207ENST00000591519 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
VPS4B-207ENST00000591519 GLI3P10071 1580 aa15.15■□□□□ 0.02
VPS4B-207ENST00000591519 GPRASP1Q5JY77 1395 aa15.15■□□□□ 0.02
VPS4B-207ENST00000591519 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
VPS4B-207ENST00000591519 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
VPS4B-207ENST00000591519 NUDT16Q96DE0 195 aaKnown RBP15.13■□□□□ 0.01
VPS4B-207ENST00000591519 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
VPS4B-207ENST00000591519 NGDNQ8NEJ9 315 aaKnown RBP15.12■□□□□ 0.01
VPS4B-207ENST00000591519 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
VPS4B-207ENST00000591519 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
VPS4B-207ENST00000591519 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
VPS4B-207ENST00000591519 ARHGEF28Q8N1W1 1705 aaKnown RBP15.11■□□□□ 0.01
VPS4B-207ENST00000591519 EP400Q96L91 3159 aa15.1■□□□□ 0.01
VPS4B-207ENST00000591519 KIAA1210Q9ULL0 1709 aa15.1■□□□□ 0.01
VPS4B-207ENST00000591519 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
VPS4B-207ENST00000591519 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
VPS4B-207ENST00000591519 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
VPS4B-207ENST00000591519 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
VPS4B-207ENST00000591519 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
VPS4B-207ENST00000591519 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
VPS4B-207ENST00000591519 ATP7BP35670 1465 aa15.08■□□□□ 0.01
VPS4B-207ENST00000591519 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
VPS4B-207ENST00000591519 BTG4Q9NY30 223 aa15.08■□□□□ 0
VPS4B-207ENST00000591519 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
VPS4B-207ENST00000591519 BRWD3Q6RI45 1802 aa15.08■□□□□ 0
VPS4B-207ENST00000591519 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0
VPS4B-207ENST00000591519 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
VPS4B-207ENST00000591519 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
VPS4B-207ENST00000591519 KRT27Q7Z3Y8 459 aa15.07■□□□□ 0
VPS4B-207ENST00000591519 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
VPS4B-207ENST00000591519 ITSN1Q15811 1721 aa15.06■□□□□ 0
VPS4B-207ENST00000591519 COL14A1Q05707 1796 aaKnown RBP15.06■□□□□ 0
VPS4B-207ENST00000591519 ACEP12821 1306 aa15.05■□□□□ -0
VPS4B-207ENST00000591519 NRAPQ86VF7 1730 aa15.05■□□□□ -0
VPS4B-207ENST00000591519 CRYBG1Q9Y4K1 1723 aa15.05■□□□□ -0
VPS4B-207ENST00000591519 SPATA31A5Q5VU36 1347 aa15.04■□□□□ -0
VPS4B-207ENST00000591519 SPATA31A7Q8IWB4 1347 aa15.04■□□□□ -0
VPS4B-207ENST00000591519 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
VPS4B-207ENST00000591519 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
VPS4B-207ENST00000591519 LHX8Q68G74 356 aa15.03■□□□□ -0
VPS4B-207ENST00000591519 PRDM11Q9NQV5 511 aa15.03■□□□□ -0
VPS4B-207ENST00000591519 SF3B2Q13435 895 aaKnown RBP15.02■□□□□ -0
VPS4B-207ENST00000591519 DEFB132Q7Z7B7 95 aa15.02■□□□□ -0
VPS4B-207ENST00000591519 CENPJQ9HC77 1338 aaPredicted RBP15.01□□□□□ -0.01
VPS4B-207ENST00000591519 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
VPS4B-207ENST00000591519 KIAA0232Q92628 1395 aa15□□□□□ -0.01
VPS4B-207ENST00000591519 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
VPS4B-207ENST00000591519 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
VPS4B-207ENST00000591519 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
VPS4B-207ENST00000591519 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
VPS4B-207ENST00000591519 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
VPS4B-207ENST00000591519 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
VPS4B-207ENST00000591519 CHRNA2Q15822 529 aa14.98□□□□□ -0.01
VPS4B-207ENST00000591519 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
VPS4B-207ENST00000591519 A0A0G2JS52 829 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 MYT1Q01538 1121 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 SRCAPQ6ZRS2 3230 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 CPDO75976 1380 aa14.97□□□□□ -0.01
VPS4B-207ENST00000591519 USP19O94966 1318 aa14.96□□□□□ -0.01
VPS4B-207ENST00000591519 PHRF1Q9P1Y6 1649 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms