RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
LINC00662-208ENST00000591338 LRRC7Q96NW7 1537 aa16.3■□□□□ 0.2
LINC00662-208ENST00000591338 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
LINC00662-208ENST00000591338 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
LINC00662-208ENST00000591338 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
LINC00662-208ENST00000591338 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
LINC00662-208ENST00000591338 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
LINC00662-208ENST00000591338 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
LINC00662-208ENST00000591338 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
LINC00662-208ENST00000591338 CNGB1Q14028 1251 aaPredicted RBP16.28■□□□□ 0.2
LINC00662-208ENST00000591338 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
LINC00662-208ENST00000591338 A0A1W2PP64 1363 aa16.27■□□□□ 0.2
LINC00662-208ENST00000591338 ATF3P18847 181 aa16.27■□□□□ 0.2
LINC00662-208ENST00000591338 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
LINC00662-208ENST00000591338 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
LINC00662-208ENST00000591338 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
LINC00662-208ENST00000591338 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
LINC00662-208ENST00000591338 MSH6P52701 1360 aa16.26■□□□□ 0.19
LINC00662-208ENST00000591338 ACEP12821 1306 aa16.25■□□□□ 0.19
LINC00662-208ENST00000591338 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
LINC00662-208ENST00000591338 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
LINC00662-208ENST00000591338 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
LINC00662-208ENST00000591338 CADPS2Q86UW7 1296 aa16.24■□□□□ 0.19
LINC00662-208ENST00000591338 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
LINC00662-208ENST00000591338 DCCP43146 1447 aa16.24■□□□□ 0.19
LINC00662-208ENST00000591338 ITSN1Q15811 1721 aa16.24■□□□□ 0.19
LINC00662-208ENST00000591338 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
LINC00662-208ENST00000591338 RALBP1Q15311 655 aa16.23■□□□□ 0.19
LINC00662-208ENST00000591338 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
LINC00662-208ENST00000591338 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
LINC00662-208ENST00000591338 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
LINC00662-208ENST00000591338 LTBP4Q8N2S1 1624 aa16.22■□□□□ 0.19
LINC00662-208ENST00000591338 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
LINC00662-208ENST00000591338 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
LINC00662-208ENST00000591338 POLR3AO14802 1390 aaPredicted RBP16.21■□□□□ 0.19
LINC00662-208ENST00000591338 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
LINC00662-208ENST00000591338 MST1RQ04912 1400 aa16.2■□□□□ 0.18
LINC00662-208ENST00000591338 FYB1O15117 783 aa16.2■□□□□ 0.18
LINC00662-208ENST00000591338 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
LINC00662-208ENST00000591338 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
LINC00662-208ENST00000591338 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
LINC00662-208ENST00000591338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■□□□□ 10.5
LINC00662-208ENST00000591338 EDC4Q6P2E9 1401 aaKnown RBP16.19■□□□□ 0.18
LINC00662-208ENST00000591338 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
LINC00662-208ENST00000591338 MON2Q7Z3U7 1717 aa16.18■□□□□ 0.18
LINC00662-208ENST00000591338 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
LINC00662-208ENST00000591338 USP6P35125 1406 aa16.17■□□□□ 0.18
LINC00662-208ENST00000591338 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
LINC00662-208ENST00000591338 NSD2O96028 1365 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 FOXO3O43524 673 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 PSME1Q06323 249 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 SSH2Q76I76 1423 aa16.16■□□□□ 0.18
LINC00662-208ENST00000591338 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
LINC00662-208ENST00000591338 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
LINC00662-208ENST00000591338 NME9Q86XW9 330 aa16.14■□□□□ 0.17
LINC00662-208ENST00000591338 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
LINC00662-208ENST00000591338 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
LINC00662-208ENST00000591338 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
LINC00662-208ENST00000591338 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
LINC00662-208ENST00000591338 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
LINC00662-208ENST00000591338 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
LINC00662-208ENST00000591338 KRT28Q7Z3Y7 464 aa16.12■□□□□ 0.17
LINC00662-208ENST00000591338 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
LINC00662-208ENST00000591338 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
LINC00662-208ENST00000591338 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
LINC00662-208ENST00000591338 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
LINC00662-208ENST00000591338 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
LINC00662-208ENST00000591338 XPCQ01831 940 aaPredicted RBP16.1■□□□□ 0.17
LINC00662-208ENST00000591338 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
LINC00662-208ENST00000591338 COG3Q96JB2 828 aa16.1■□□□□ 0.17
LINC00662-208ENST00000591338 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
LINC00662-208ENST00000591338 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
LINC00662-208ENST00000591338 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
LINC00662-208ENST00000591338 ABTB2Q8N961 1025 aa16.08■□□□□ 0.16
LINC00662-208ENST00000591338 NLRP6P59044 892 aa16.07■□□□□ 0.16
LINC00662-208ENST00000591338 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
LINC00662-208ENST00000591338 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
LINC00662-208ENST00000591338 FBLN1P23142 703 aa16.05■□□□□ 0.16
LINC00662-208ENST00000591338 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
LINC00662-208ENST00000591338 TOM1O60784 492 aa16.04■□□□□ 0.16
LINC00662-208ENST00000591338 MTHFSP49914 203 aa16.04■□□□□ 0.16
LINC00662-208ENST00000591338 PIK3C2AO00443 1686 aa16.04■□□□□ 0.16
LINC00662-208ENST00000591338 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
LINC00662-208ENST00000591338 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
LINC00662-208ENST00000591338 TRPM3Q9HCF6 1732 aaPredicted RBP16.03■□□□□ 0.16
LINC00662-208ENST00000591338 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
LINC00662-208ENST00000591338 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
LINC00662-208ENST00000591338 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
LINC00662-208ENST00000591338 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.16
LINC00662-208ENST00000591338 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
LINC00662-208ENST00000591338 PXDNQ92626 1479 aa16.02■□□□□ 0.15
LINC00662-208ENST00000591338 AATKQ6ZMQ8 1374 aa16.01■□□□□ 0.15
LINC00662-208ENST00000591338 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
LINC00662-208ENST00000591338 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
LINC00662-208ENST00000591338 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
LINC00662-208ENST00000591338 HAX1O00165 279 aa16■□□□□ 0.15
LINC00662-208ENST00000591338 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
LINC00662-208ENST00000591338 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms