RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 PXDNQ92626 1479 aa25.24■■□□□ 1.63
CROCCP3-205ENST00000591316 MYOM1P52179 1685 aa25.23■■□□□ 1.63
CROCCP3-205ENST00000591316 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
CROCCP3-205ENST00000591316 SPATA31A3Q5VYP0 1347 aa25.23■■□□□ 1.63
CROCCP3-205ENST00000591316 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
CROCCP3-205ENST00000591316 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
CROCCP3-205ENST00000591316 SBNO1A3KN83 1393 aa25.21■■□□□ 1.63
CROCCP3-205ENST00000591316 CNGB1Q14028 1251 aaPredicted RBP25.2■■□□□ 1.62
CROCCP3-205ENST00000591316 NME9Q86XW9 330 aa25.2■■□□□ 1.62
CROCCP3-205ENST00000591316 KNSTRNQ9Y448 316 aa25.2■■□□□ 1.62
CROCCP3-205ENST00000591316 ZRANB1Q9UGI0 708 aa25.19■■□□□ 1.62
CROCCP3-205ENST00000591316 NSD3Q9BZ95 1437 aa25.19■■□□□ 1.62
CROCCP3-205ENST00000591316 NLRP6P59044 892 aa25.18■■□□□ 1.62
CROCCP3-205ENST00000591316 EDC4Q6P2E9 1401 aaKnown RBP25.18■■□□□ 1.62
CROCCP3-205ENST00000591316 SSH2Q76I76 1423 aa25.18■■□□□ 1.62
CROCCP3-205ENST00000591316 AKAP12Q02952 1782 aa25.18■■□□□ 1.62
CROCCP3-205ENST00000591316 TTC21AQ8NDW8 1320 aa25.17■■□□□ 1.62
CROCCP3-205ENST00000591316 TNS3Q68CZ2 1445 aa25.16■■□□□ 1.62
CROCCP3-205ENST00000591316 BRD4O60885 1362 aaPredicted RBP25.16■■□□□ 1.62
CROCCP3-205ENST00000591316 PER1O15534 1290 aaPredicted RBP25.16■■□□□ 1.62
CROCCP3-205ENST00000591316 CABLES1Q8TDN4 633 aa25.16■■□□□ 1.62
CROCCP3-205ENST00000591316 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
CROCCP3-205ENST00000591316 FYB1O15117 783 aa25.15■■□□□ 1.62
CROCCP3-205ENST00000591316 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
CROCCP3-205ENST00000591316 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
CROCCP3-205ENST00000591316 CGNL1Q0VF96 1302 aa25.13■■□□□ 1.61
CROCCP3-205ENST00000591316 NUTM2BA6NNL0 878 aaPredicted RBP25.13■■□□□ 1.61
CROCCP3-205ENST00000591316 NUTM2EB1AL46 878 aaPredicted RBP25.13■■□□□ 1.61
CROCCP3-205ENST00000591316 NUTM2AQ8IVF1 878 aaPredicted RBP25.13■■□□□ 1.61
CROCCP3-205ENST00000591316 MON2Q7Z3U7 1717 aa25.12■■□□□ 1.61
CROCCP3-205ENST00000591316 ARHGEF10O15013 1369 aa25.12■■□□□ 1.61
CROCCP3-205ENST00000591316 JCADQ9P266 1359 aa25.12■■□□□ 1.61
CROCCP3-205ENST00000591316 HAP1P54257 671 aaPredicted RBP25.12■■□□□ 1.61
CROCCP3-205ENST00000591316 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
CROCCP3-205ENST00000591316 SOX12O15370 315 aa25.11■■□□□ 1.61
CROCCP3-205ENST00000591316 PNPLA6Q8IY17 1366 aa25.11■■□□□ 1.61
CROCCP3-205ENST00000591316 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
CROCCP3-205ENST00000591316 COG3Q96JB2 828 aa25.1■■□□□ 1.61
CROCCP3-205ENST00000591316 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
CROCCP3-205ENST00000591316 NRKQ7Z2Y5 1582 aa25.07■■□□□ 1.6
CROCCP3-205ENST00000591316 ALS2Q96Q42 1657 aa25.05■■□□□ 1.6
CROCCP3-205ENST00000591316 GCP02774 474 aa25.05■■□□□ 1.6
CROCCP3-205ENST00000591316 TNNT2P45379 298 aaPredicted RBP25.05■■□□□ 1.6
CROCCP3-205ENST00000591316 ADAMTS2O95450 1211 aa25.04■■□□□ 1.6
CROCCP3-205ENST00000591316 FBLN1P23142 703 aa25.04■■□□□ 1.6
CROCCP3-205ENST00000591316 USP31Q70CQ4 1352 aa25.03■■□□□ 1.6
CROCCP3-205ENST00000591316 ZC3H6P61129 1189 aaKnown RBP25.03■■□□□ 1.6
CROCCP3-205ENST00000591316 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
CROCCP3-205ENST00000591316 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
CROCCP3-205ENST00000591316 MORC1Q86VD1 984 aa25.02■■□□□ 1.6
CROCCP3-205ENST00000591316 SPATA31A6Q5VVP1 1343 aa25.01■■□□□ 1.59
CROCCP3-205ENST00000591316 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
CROCCP3-205ENST00000591316 USP19O94966 1318 aa25■■□□□ 1.59
CROCCP3-205ENST00000591316 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
CROCCP3-205ENST00000591316 OVOS2A0A0J9YW53 1432 aa24.97■■□□□ 1.59
CROCCP3-205ENST00000591316 OVOS2Q6IE36 1432 aa24.97■■□□□ 1.59
CROCCP3-205ENST00000591316 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
CROCCP3-205ENST00000591316 SHPRHQ149N8 1683 aa24.96■■□□□ 1.59
CROCCP3-205ENST00000591316 NSD2O96028 1365 aa24.96■■□□□ 1.59
CROCCP3-205ENST00000591316 RRS1Q15050 365 aaKnown RBP24.94■■□□□ 1.58
CROCCP3-205ENST00000591316 CHRNA2Q15822 529 aa24.94■■□□□ 1.58
CROCCP3-205ENST00000591316 KIF20BQ96Q89 1820 aa24.94■■□□□ 1.58
CROCCP3-205ENST00000591316 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
CROCCP3-205ENST00000591316 FAM83GA6ND36 823 aa24.93■■□□□ 1.58
CROCCP3-205ENST00000591316 C8orf37Q96NL8 207 aa24.93■■□□□ 1.58
CROCCP3-205ENST00000591316 PRDM11Q9NQV5 511 aa24.93■■□□□ 1.58
CROCCP3-205ENST00000591316 KIAA0232Q92628 1395 aa24.92■■□□□ 1.58
CROCCP3-205ENST00000591316 NPC1L1Q9UHC9 1359 aa24.92■■□□□ 1.58
CROCCP3-205ENST00000591316 PPM1GO15355 546 aaPredicted RBP24.92■■□□□ 1.58
CROCCP3-205ENST00000591316 ARHGEF25Q86VW2 580 aa24.9■■□□□ 1.58
CROCCP3-205ENST00000591316 NGLY1Q96IV0 654 aa24.9■■□□□ 1.58
CROCCP3-205ENST00000591316 SLIT3O75094 1523 aa24.89■■□□□ 1.58
CROCCP3-205ENST00000591316 LRP6O75581 1613 aa24.89■■□□□ 1.58
CROCCP3-205ENST00000591316 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.58
CROCCP3-205ENST00000591316 AMPHP49418 695 aa24.88■■□□□ 1.57
CROCCP3-205ENST00000591316 EMILIN1Q9Y6C2 1016 aa24.88■■□□□ 1.57
CROCCP3-205ENST00000591316 MAP3K19Q56UN5 1328 aa24.87■■□□□ 1.57
CROCCP3-205ENST00000591316 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
CROCCP3-205ENST00000591316 PHRF1Q9P1Y6 1649 aaKnown RBP24.87■■□□□ 1.57
CROCCP3-205ENST00000591316 CRYBG1Q9Y4K1 1723 aa24.85■■□□□ 1.57
CROCCP3-205ENST00000591316 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
CROCCP3-205ENST00000591316 ANP32CO43423 234 aa24.84■■□□□ 1.57
CROCCP3-205ENST00000591316 RALBP1Q15311 655 aa24.84■■□□□ 1.57
CROCCP3-205ENST00000591316 BTG4Q9NY30 223 aa24.84■■□□□ 1.57
CROCCP3-205ENST00000591316 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
CROCCP3-205ENST00000591316 USP54Q70EL1 1684 aa24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 NFAT5O94916 1531 aa24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 CPDO75976 1380 aa24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 ABCA3Q99758 1704 aa24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 MTHFSP49914 203 aa24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 PRKRIP1Q9H875 184 aaPredicted RBP24.83■■□□□ 1.57
CROCCP3-205ENST00000591316 AATKQ6ZMQ8 1374 aa24.82■■□□□ 1.56
CROCCP3-205ENST00000591316 ANKRD26Q9UPS8 1709 aa24.81■■□□□ 1.56
CROCCP3-205ENST00000591316 PPP2R1AP30153 589 aa24.81■■□□□ 1.56
CROCCP3-205ENST00000591316 EVA1CP58658 441 aa24.81■■□□□ 1.56
CROCCP3-205ENST00000591316 HOXC9P31274 260 aa24.8■■□□□ 1.56
CROCCP3-205ENST00000591316 IP6K1Q92551 441 aa24.8■■□□□ 1.56
CROCCP3-205ENST00000591316 LTV1Q96GA3 475 aaPredicted RBP24.8■■□□□ 1.56
CROCCP3-205ENST00000591316 PARD3Q8TEW0 1356 aa24.8■■□□□ 1.56
CROCCP3-205ENST00000591316 HSP90AB2PQ58FF8 381 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms