RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 CABLES1Q8TDN4 633 aa28.96■■■□□ 2.23
ERCC2-212ENST00000591309 ZNF692Q9BU19 519 aaPredicted RBP28.96■■■□□ 2.23
ERCC2-212ENST00000591309 TRPM3Q9HCF6 1732 aaPredicted RBP28.95■■■□□ 2.23
ERCC2-212ENST00000591309 PUS7Q96PZ0 661 aaKnown RBP28.95■■■□□ 2.22
ERCC2-212ENST00000591309 BRD4O60885 1362 aaPredicted RBP28.93■■■□□ 2.22
ERCC2-212ENST00000591309 ABTB2Q8N961 1025 aa28.93■■■□□ 2.22
ERCC2-212ENST00000591309 CDCA8Q53HL2 280 aa28.92■■■□□ 2.22
ERCC2-212ENST00000591309 EIF4G2P78344 907 aaKnown RBP eCLIP28.91■■■□□ 2.22
ERCC2-212ENST00000591309 POTEAQ6S8J7 498 aa28.91■■■□□ 2.22
ERCC2-212ENST00000591309 HDGFL2Q7Z4V5 671 aaPredicted RBP28.9■■■□□ 2.22
ERCC2-212ENST00000591309 NUTM2GQ5VZR2 741 aa28.89■■■□□ 2.22
ERCC2-212ENST00000591309 ALS2Q96Q42 1657 aa28.89■■■□□ 2.21
ERCC2-212ENST00000591309 USP6P35125 1406 aa28.88■■■□□ 2.21
ERCC2-212ENST00000591309 USP21Q9UK80 565 aa28.88■■■□□ 2.21
ERCC2-212ENST00000591309 NLRP13Q86W25 1043 aa28.87■■■□□ 2.21
ERCC2-212ENST00000591309 TERF2IPQ9NYB0 399 aa28.87■■■□□ 2.21
ERCC2-212ENST00000591309 KTN1Q86UP2 1357 aaKnown RBP28.87■■■□□ 2.21
ERCC2-212ENST00000591309 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
ERCC2-212ENST00000591309 FNBP4Q8N3X1 1017 aaPredicted RBP28.84■■■□□ 2.21
ERCC2-212ENST00000591309 QTRT2Q9H974 415 aaKnown RBP28.84■■■□□ 2.21
ERCC2-212ENST00000591309 NINLQ9Y2I6 1382 aa28.83■■■□□ 2.21
ERCC2-212ENST00000591309 RXRBP28702 533 aa28.82■■■□□ 2.2
ERCC2-212ENST00000591309 NLRP6P59044 892 aa28.82■■■□□ 2.2
ERCC2-212ENST00000591309 MARF1Q9Y4F3 1742 aaKnown RBP28.82■■■□□ 2.2
ERCC2-212ENST00000591309 TTC21BQ7Z4L5 1316 aa28.81■■■□□ 2.2
ERCC2-212ENST00000591309 HSPA5P11021 654 aaKnown RBP28.81■■■□□ 2.2
ERCC2-212ENST00000591309 TRPC5Q9UL62 973 aaPredicted RBP28.81■■■□□ 2.2
ERCC2-212ENST00000591309 CPSF1Q10570 1443 aaKnown RBP28.8■■■□□ 2.2
ERCC2-212ENST00000591309 TTC21AQ8NDW8 1320 aa28.8■■■□□ 2.2
ERCC2-212ENST00000591309 PRDM11Q9NQV5 511 aa28.78■■■□□ 2.2
ERCC2-212ENST00000591309 AKAP12Q02952 1782 aa28.78■■■□□ 2.2
ERCC2-212ENST00000591309 ABCA3Q99758 1704 aa28.77■■■□□ 2.2
ERCC2-212ENST00000591309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.77■■■□□ 2.2
ERCC2-212ENST00000591309 RBM6P78332 1123 aaKnown RBP28.76■■■□□ 2.19
ERCC2-212ENST00000591309 UNC5CLQ8IV45 518 aa28.76■■■□□ 2.19
ERCC2-212ENST00000591309 POLR3GLQ9BT43 218 aa28.76■■■□□ 2.19
ERCC2-212ENST00000591309 FAM83GA6ND36 823 aa28.75■■■□□ 2.19
ERCC2-212ENST00000591309 ZC3H6P61129 1189 aaKnown RBP28.75■■■□□ 2.19
ERCC2-212ENST00000591309 SSH2Q76I76 1423 aa28.75■■■□□ 2.19
ERCC2-212ENST00000591309 A0A1W2PP64 1363 aa28.73■■■□□ 2.19
ERCC2-212ENST00000591309 USP19O94966 1318 aa28.72■■■□□ 2.19
ERCC2-212ENST00000591309 GCP02774 474 aa28.72■■■□□ 2.19
ERCC2-212ENST00000591309 SLIT2O94813 1529 aa28.72■■■□□ 2.19
ERCC2-212ENST00000591309 KIAA0232Q92628 1395 aa28.71■■■□□ 2.19
ERCC2-212ENST00000591309 BCL9LQ86UU0 1499 aa28.71■■■□□ 2.19
ERCC2-212ENST00000591309 CD163L1Q9NR16 1453 aa28.71■■■□□ 2.19
ERCC2-212ENST00000591309 EDC4Q6P2E9 1401 aaKnown RBP28.7■■■□□ 2.19
ERCC2-212ENST00000591309 BTG4Q9NY30 223 aa28.7■■■□□ 2.18
ERCC2-212ENST00000591309 CCDC9Q9Y3X0 531 aaKnown RBP28.7■■■□□ 2.18
ERCC2-212ENST00000591309 MON2Q7Z3U7 1717 aa28.69■■■□□ 2.18
ERCC2-212ENST00000591309 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
ERCC2-212ENST00000591309 SOCS7O14512 581 aa28.69■■■□□ 2.18
ERCC2-212ENST00000591309 CRYBG1Q9Y4K1 1723 aa28.69■■■□□ 2.18
ERCC2-212ENST00000591309 PHRF1Q9P1Y6 1649 aaKnown RBP28.69■■■□□ 2.18
ERCC2-212ENST00000591309 ANKRD36BQ8N2N9 1353 aa28.68■■■□□ 2.18
ERCC2-212ENST00000591309 KCNH5Q8NCM2 988 aa28.68■■■□□ 2.18
ERCC2-212ENST00000591309 ATRNO75882 1429 aa28.68■■■□□ 2.18
ERCC2-212ENST00000591309 CHRNA2Q15822 529 aa28.67■■■□□ 2.18
ERCC2-212ENST00000591309 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
ERCC2-212ENST00000591309 GJD4Q96KN9 370 aaPredicted RBP28.66■■■□□ 2.18
ERCC2-212ENST00000591309 PIK3C2AO00443 1686 aa28.65■■■□□ 2.18
ERCC2-212ENST00000591309 SOX12O15370 315 aa28.65■■■□□ 2.18
ERCC2-212ENST00000591309 NME9Q86XW9 330 aa28.65■■■□□ 2.18
ERCC2-212ENST00000591309 NRKQ7Z2Y5 1582 aa28.65■■■□□ 2.18
ERCC2-212ENST00000591309 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.18
ERCC2-212ENST00000591309 NWD2Q9ULI1 1742 aa28.64■■■□□ 2.18
ERCC2-212ENST00000591309 VPS72Q15906 364 aa28.63■■■□□ 2.17
ERCC2-212ENST00000591309 CPDO75976 1380 aa28.62■■■□□ 2.17
ERCC2-212ENST00000591309 EVA1CP58658 441 aa28.62■■■□□ 2.17
ERCC2-212ENST00000591309 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.62■■■□□ 2.17
ERCC2-212ENST00000591309 CDK12Q9NYV4 1490 aaPredicted RBP28.61■■■□□ 2.17
ERCC2-212ENST00000591309 USP31Q70CQ4 1352 aa28.61■■■□□ 2.17
ERCC2-212ENST00000591309 SLIT3O75094 1523 aa28.6■■■□□ 2.17
ERCC2-212ENST00000591309 STRN4Q9NRL3 753 aa28.6■■■□□ 2.17
ERCC2-212ENST00000591309 ZRANB1Q9UGI0 708 aa28.6■■■□□ 2.17
ERCC2-212ENST00000591309 COG3Q96JB2 828 aa28.59■■■□□ 2.17
ERCC2-212ENST00000591309 RGS12O14924 1447 aa28.53■■■□□ 2.16
ERCC2-212ENST00000591309 A0A0G2JS52 829 aa28.53■■■□□ 2.16
ERCC2-212ENST00000591309 MYT1Q01538 1121 aa28.53■■■□□ 2.16
ERCC2-212ENST00000591309 ARHGEF25Q86VW2 580 aa28.53■■■□□ 2.16
ERCC2-212ENST00000591309 AATKQ6ZMQ8 1374 aa28.52■■■□□ 2.16
ERCC2-212ENST00000591309 NRAPQ86VF7 1730 aa28.51■■■□□ 2.15
ERCC2-212ENST00000591309 MYOM1P52179 1685 aa28.5■■■□□ 2.15
ERCC2-212ENST00000591309 GGNBP2Q9H3C7 697 aa28.49■■■□□ 2.15
ERCC2-212ENST00000591309 NSD3Q9BZ95 1437 aa28.49■■■□□ 2.15
ERCC2-212ENST00000591309 SPATA31A5Q5VU36 1347 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 SPATA31A7Q8IWB4 1347 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 C11orf95C9JLR9 678 aaPredicted RBP28.48■■■□□ 2.15
ERCC2-212ENST00000591309 FYB1O15117 783 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 CAMTA1Q9Y6Y1 1673 aa28.48■■■□□ 2.15
ERCC2-212ENST00000591309 GLI3P10071 1580 aa28.47■■■□□ 2.15
ERCC2-212ENST00000591309 CARD14Q9BXL6 1004 aa28.47■■■□□ 2.15
ERCC2-212ENST00000591309 USP54Q70EL1 1684 aa28.47■■■□□ 2.15
ERCC2-212ENST00000591309 CGNL1Q0VF96 1302 aa28.46■■■□□ 2.15
ERCC2-212ENST00000591309 FAM98CQ17RN3 349 aaKnown RBP28.46■■■□□ 2.15
ERCC2-212ENST00000591309 PANK3Q9H999 370 aa28.46■■■□□ 2.15
ERCC2-212ENST00000591309 USP35Q9P2H5 1018 aa28.46■■■□□ 2.15
ERCC2-212ENST00000591309 CSB-PGBD3P0DP91 1061 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms