RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 XPCQ01831 940 aaPredicted RBP23.51■■□□□ 1.35
RPRD1A-209ENST00000590898 EDC4Q6P2E9 1401 aaKnown RBP23.51■■□□□ 1.35
RPRD1A-209ENST00000590898 COL16A1Q07092 1604 aaPredicted RBP23.51■■□□□ 1.35
RPRD1A-209ENST00000590898 HSPA1LP34931 641 aa23.49■■□□□ 1.35
RPRD1A-209ENST00000590898 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
RPRD1A-209ENST00000590898 TTC21AQ8NDW8 1320 aa23.49■■□□□ 1.35
RPRD1A-209ENST00000590898 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
RPRD1A-209ENST00000590898 TTC21BQ7Z4L5 1316 aa23.49■■□□□ 1.35
RPRD1A-209ENST00000590898 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
RPRD1A-209ENST00000590898 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
RPRD1A-209ENST00000590898 TNS3Q68CZ2 1445 aa23.46■■□□□ 1.35
RPRD1A-209ENST00000590898 ALS2Q96Q42 1657 aa23.46■■□□□ 1.35
RPRD1A-209ENST00000590898 ARHGEF10O15013 1369 aa23.44■■□□□ 1.34
RPRD1A-209ENST00000590898 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
RPRD1A-209ENST00000590898 ABTB2Q8N961 1025 aa23.43■■□□□ 1.34
RPRD1A-209ENST00000590898 NSD3Q9BZ95 1437 aa23.43■■□□□ 1.34
RPRD1A-209ENST00000590898 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
RPRD1A-209ENST00000590898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.349e-7■■□□□ 11.7
RPRD1A-209ENST00000590898 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
RPRD1A-209ENST00000590898 JCADQ9P266 1359 aa23.41■■□□□ 1.34
RPRD1A-209ENST00000590898 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
RPRD1A-209ENST00000590898 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
RPRD1A-209ENST00000590898 FYB1O15117 783 aa23.39■■□□□ 1.34
RPRD1A-209ENST00000590898 NLRP13Q86W25 1043 aa23.39■■□□□ 1.34
RPRD1A-209ENST00000590898 SHPRHQ149N8 1683 aa23.39■■□□□ 1.33
RPRD1A-209ENST00000590898 USP31Q70CQ4 1352 aa23.39■■□□□ 1.33
RPRD1A-209ENST00000590898 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
RPRD1A-209ENST00000590898 PNPLA6Q8IY17 1366 aa23.38■■□□□ 1.33
RPRD1A-209ENST00000590898 NLRP6P59044 892 aa23.37■■□□□ 1.33
RPRD1A-209ENST00000590898 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
RPRD1A-209ENST00000590898 NME9Q86XW9 330 aa23.37■■□□□ 1.33
RPRD1A-209ENST00000590898 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
RPRD1A-209ENST00000590898 USP54Q70EL1 1684 aa23.36■■□□□ 1.33
RPRD1A-209ENST00000590898 NSD2O96028 1365 aa23.35■■□□□ 1.33
RPRD1A-209ENST00000590898 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
RPRD1A-209ENST00000590898 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
RPRD1A-209ENST00000590898 MED1Q15648 1581 aaPredicted RBP23.33■■□□□ 1.33
RPRD1A-209ENST00000590898 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.32
RPRD1A-209ENST00000590898 COG3Q96JB2 828 aa23.33■■□□□ 1.32
RPRD1A-209ENST00000590898 USP19O94966 1318 aa23.33■■□□□ 1.32
RPRD1A-209ENST00000590898 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.32
RPRD1A-209ENST00000590898 ILDR1Q86SU0 546 aaPredicted RBP23.32■■□□□ 1.32
RPRD1A-209ENST00000590898 MARF1Q9Y4F3 1742 aaKnown RBP23.32■■□□□ 1.32
RPRD1A-209ENST00000590898 GGNBP2Q9H3C7 697 aa23.31■■□□□ 1.32
RPRD1A-209ENST00000590898 OVOS2A0A0J9YW53 1432 aa23.31■■□□□ 1.32
RPRD1A-209ENST00000590898 OVOS2Q6IE36 1432 aa23.31■■□□□ 1.32
RPRD1A-209ENST00000590898 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
RPRD1A-209ENST00000590898 CRYBG1Q9Y4K1 1723 aa23.3■■□□□ 1.32
RPRD1A-209ENST00000590898 ANKRD26Q9UPS8 1709 aa23.3■■□□□ 1.32
RPRD1A-209ENST00000590898 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
RPRD1A-209ENST00000590898 GCP02774 474 aa23.28■■□□□ 1.32
RPRD1A-209ENST00000590898 CABLES1Q8TDN4 633 aa23.27■■□□□ 1.32
RPRD1A-209ENST00000590898 SLIT3O75094 1523 aa23.27■■□□□ 1.32
RPRD1A-209ENST00000590898 ABCA3Q99758 1704 aa23.26■■□□□ 1.31
RPRD1A-209ENST00000590898 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
RPRD1A-209ENST00000590898 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
RPRD1A-209ENST00000590898 MIER1Q8N108 512 aa23.24■■□□□ 1.31
RPRD1A-209ENST00000590898 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
RPRD1A-209ENST00000590898 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
RPRD1A-209ENST00000590898 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
RPRD1A-209ENST00000590898 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
RPRD1A-209ENST00000590898 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
RPRD1A-209ENST00000590898 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
RPRD1A-209ENST00000590898 CPDO75976 1380 aa23.2■■□□□ 1.31
RPRD1A-209ENST00000590898 NFAT5O94916 1531 aa23.2■■□□□ 1.3
RPRD1A-209ENST00000590898 MAP2P11137 1827 aaKnown RBP23.2■■□□□ 1.3
RPRD1A-209ENST00000590898 AATKQ6ZMQ8 1374 aa23.2■■□□□ 1.3
RPRD1A-209ENST00000590898 ARHGEF25Q86VW2 580 aa23.18■■□□□ 1.3
RPRD1A-209ENST00000590898 ZC3H6P61129 1189 aaKnown RBP23.17■■□□□ 1.3
RPRD1A-209ENST00000590898 SOX12O15370 315 aa23.16■■□□□ 1.3
RPRD1A-209ENST00000590898 LRP6O75581 1613 aa23.16■■□□□ 1.3
RPRD1A-209ENST00000590898 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
RPRD1A-209ENST00000590898 RALBP1Q15311 655 aa23.16■■□□□ 1.3
RPRD1A-209ENST00000590898 KIAA0232Q92628 1395 aa23.15■■□□□ 1.3
RPRD1A-209ENST00000590898 LTN1O94822 1766 aa23.15■■□□□ 1.3
RPRD1A-209ENST00000590898 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.3
RPRD1A-209ENST00000590898 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.3
RPRD1A-209ENST00000590898 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.29
RPRD1A-209ENST00000590898 FAM83GA6ND36 823 aa23.14■■□□□ 1.29
RPRD1A-209ENST00000590898 FBLN1P23142 703 aa23.14■■□□□ 1.29
RPRD1A-209ENST00000590898 TNNT2P45379 298 aaPredicted RBP23.13■■□□□ 1.29
RPRD1A-209ENST00000590898 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
RPRD1A-209ENST00000590898 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
RPRD1A-209ENST00000590898 COL14A1Q05707 1796 aaKnown RBP23.12■■□□□ 1.29
RPRD1A-209ENST00000590898 MAP3K19Q56UN5 1328 aa23.12■■□□□ 1.29
RPRD1A-209ENST00000590898 PRKRIP1Q9H875 184 aaPredicted RBP23.12■■□□□ 1.29
RPRD1A-209ENST00000590898 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
RPRD1A-209ENST00000590898 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
RPRD1A-209ENST00000590898 ABCC6O95255 1503 aa23.11■■□□□ 1.29
RPRD1A-209ENST00000590898 COL18A1P39060 1754 aa23.11■■□□□ 1.29
RPRD1A-209ENST00000590898 IP6K1Q92551 441 aa23.1■■□□□ 1.29
RPRD1A-209ENST00000590898 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
RPRD1A-209ENST00000590898 NGLY1Q96IV0 654 aa23.09■■□□□ 1.29
RPRD1A-209ENST00000590898 AMPHP49418 695 aa23.08■■□□□ 1.29
RPRD1A-209ENST00000590898 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
RPRD1A-209ENST00000590898 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
RPRD1A-209ENST00000590898 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
RPRD1A-209ENST00000590898 NWD2Q9ULI1 1742 aa23.07■■□□□ 1.28
RPRD1A-209ENST00000590898 LMO7Q8WWI1 1683 aa23.07■■□□□ 1.28
RPRD1A-209ENST00000590898 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms