RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 NSD2O96028 1365 aa24.42■■□□□ 1.5
MBD3-207ENST00000590550 PLEKHF1Q96S99 279 aa24.42■■□□□ 1.5
MBD3-207ENST00000590550 TRIM35Q9UPQ4 493 aa24.42■■□□□ 1.5
MBD3-207ENST00000590550 MYO5BQ9ULV0 1848 aa24.41■■□□□ 1.5
MBD3-207ENST00000590550 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
MBD3-207ENST00000590550 MVPQ14764 893 aaKnown RBP24.4■■□□□ 1.5
MBD3-207ENST00000590550 ZKSCAN2Q63HK3 967 aa24.4■■□□□ 1.5
MBD3-207ENST00000590550 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
MBD3-207ENST00000590550 HSP90AA1P07900 732 aaKnown RBP24.39■■□□□ 1.5
MBD3-207ENST00000590550 PNNQ9H307 717 aaKnown RBP24.39■■□□□ 1.49
MBD3-207ENST00000590550 DZIP1LQ8IYY4 767 aaKnown RBP24.38■■□□□ 1.49
MBD3-207ENST00000590550 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
MBD3-207ENST00000590550 CABP1Q9NZU7 370 aa24.38■■□□□ 1.49
MBD3-207ENST00000590550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
MBD3-207ENST00000590550 NEO1Q92859 1461 aa24.38■■□□□ 1.49
MBD3-207ENST00000590550 TERF2IPQ9NYB0 399 aa24.37■■□□□ 1.49
MBD3-207ENST00000590550 TRIM27P14373 513 aa24.37■■□□□ 1.49
MBD3-207ENST00000590550 RIPK4P57078 832 aa24.37■■□□□ 1.49
MBD3-207ENST00000590550 CDK19Q9BWU1 502 aa24.37■■□□□ 1.49
MBD3-207ENST00000590550 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
MBD3-207ENST00000590550 PTPRMP28827 1452 aa24.36■■□□□ 1.49
MBD3-207ENST00000590550 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
MBD3-207ENST00000590550 RWDD1Q9H446 243 aaPredicted RBP24.36■■□□□ 1.49
MBD3-207ENST00000590550 ITPRIPQ8IWB1 547 aa24.35■■□□□ 1.49
MBD3-207ENST00000590550 ARHGAP31Q2M1Z3 1444 aa24.35■■□□□ 1.49
MBD3-207ENST00000590550 YTHDC2Q9H6S0 1430 aaKnown RBP24.34■■□□□ 1.49
MBD3-207ENST00000590550 CD163L1Q9NR16 1453 aa24.34■■□□□ 1.49
MBD3-207ENST00000590550 WAPLQ7Z5K2 1190 aa24.34■■□□□ 1.49
MBD3-207ENST00000590550 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
MBD3-207ENST00000590550 NOB1Q9ULX3 412 aaKnown RBP24.33■■□□□ 1.49
MBD3-207ENST00000590550 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
MBD3-207ENST00000590550 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
MBD3-207ENST00000590550 L1TD1Q5T7N2 865 aaKnown RBP24.32■■□□□ 1.48
MBD3-207ENST00000590550 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
MBD3-207ENST00000590550 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
MBD3-207ENST00000590550 ATAD2Q6PL18 1390 aa24.31■■□□□ 1.48
MBD3-207ENST00000590550 NLRP1Q9C000 1473 aa24.31■■□□□ 1.48
MBD3-207ENST00000590550 RRP9O43818 475 aaKnown RBP24.31■■□□□ 1.48
MBD3-207ENST00000590550 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
MBD3-207ENST00000590550 HDGFL2Q7Z4V5 671 aaPredicted RBP24.3■■□□□ 1.48
MBD3-207ENST00000590550 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
MBD3-207ENST00000590550 TMEM131LA2VDJ0 1609 aa24.29■■□□□ 1.48
MBD3-207ENST00000590550 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
MBD3-207ENST00000590550 PODXL2Q9NZ53 605 aa24.29■■□□□ 1.48
MBD3-207ENST00000590550 ATF7IPQ6VMQ6 1270 aa24.28■■□□□ 1.48
MBD3-207ENST00000590550 TMEM57Q8N5G2 664 aa24.28■■□□□ 1.48
MBD3-207ENST00000590550 THUMPD2Q9BTF0 503 aaKnown RBP24.28■■□□□ 1.48
MBD3-207ENST00000590550 HMOX1P09601 288 aa24.27■■□□□ 1.48
MBD3-207ENST00000590550 AAMPQ13685 434 aa24.27■■□□□ 1.48
MBD3-207ENST00000590550 SPRYD3Q8NCJ5 442 aa24.27■■□□□ 1.48
MBD3-207ENST00000590550 PREX1Q8TCU6 1659 aa24.27■■□□□ 1.48
MBD3-207ENST00000590550 MLECQ14165 292 aa24.26■■□□□ 1.47
MBD3-207ENST00000590550 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
MBD3-207ENST00000590550 PANK2Q9BZ23 570 aa24.25■■□□□ 1.47
MBD3-207ENST00000590550 UPF2Q9HAU5 1272 aaKnown RBP24.25■■□□□ 1.47
MBD3-207ENST00000590550 TBC1D32Q96NH3 1257 aa24.25■■□□□ 1.47
MBD3-207ENST00000590550 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
MBD3-207ENST00000590550 XRCC6P12956 609 aaKnown RBP eCLIP24.23■■□□□ 1.47
MBD3-207ENST00000590550 BECN1Q14457 450 aa24.23■■□□□ 1.47
MBD3-207ENST00000590550 NCBP3Q53F19 620 aaKnown RBP24.23■■□□□ 1.47
MBD3-207ENST00000590550 PHACTR3Q96KR7 559 aa24.23■■□□□ 1.47
MBD3-207ENST00000590550 POLKQ9UBT6 870 aa24.22■■□□□ 1.47
MBD3-207ENST00000590550 ZRANB1Q9UGI0 708 aa24.22■■□□□ 1.47
MBD3-207ENST00000590550 DDX19BQ9UMR2 479 aa24.22■■□□□ 1.47
MBD3-207ENST00000590550 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
MBD3-207ENST00000590550 CT47B1P0C2W7 299 aaPredicted RBP24.22■■□□□ 1.47
MBD3-207ENST00000590550 CLCN1P35523 988 aa24.21■■□□□ 1.47
MBD3-207ENST00000590550 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
MBD3-207ENST00000590550 ELL2O00472 640 aaPredicted RBP24.21■■□□□ 1.47
MBD3-207ENST00000590550 TBC1D2Q9BYX2 928 aa24.21■■□□□ 1.47
MBD3-207ENST00000590550 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
MBD3-207ENST00000590550 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
MBD3-207ENST00000590550 ARHGEF40Q8TER5 1519 aa24.2■■□□□ 1.46
MBD3-207ENST00000590550 FAM69CQ0P6D2 419 aa24.19■■□□□ 1.46
MBD3-207ENST00000590550 GOLGA6L3A6NEY3 463 aa24.19■■□□□ 1.46
MBD3-207ENST00000590550 PNPLA6Q8IY17 1366 aa24.18■■□□□ 1.46
MBD3-207ENST00000590550 NME9Q86XW9 330 aa24.17■■□□□ 1.46
MBD3-207ENST00000590550 ZBTB40Q9NUA8 1239 aa24.17■■□□□ 1.46
MBD3-207ENST00000590550 IL16Q14005 1332 aa24.17■■□□□ 1.46
MBD3-207ENST00000590550 LRRC7Q96NW7 1537 aa24.17■■□□□ 1.46
MBD3-207ENST00000590550 FCHSD2O94868 740 aa24.16■■□□□ 1.46
MBD3-207ENST00000590550 HDAC1Q13547 482 aaPredicted RBP24.16■■□□□ 1.46
MBD3-207ENST00000590550 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
MBD3-207ENST00000590550 C1orf115Q9H7X2 142 aa24.15■■□□□ 1.46
MBD3-207ENST00000590550 LNPKQ9C0E8 428 aa24.15■■□□□ 1.46
MBD3-207ENST00000590550 MED14O60244 1454 aa24.15■■□□□ 1.46
MBD3-207ENST00000590550 ANTXR1Q9H6X2 564 aa24.14■■□□□ 1.45
MBD3-207ENST00000590550 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.45
MBD3-207ENST00000590550 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
MBD3-207ENST00000590550 KIF16BQ96L93 1317 aa24.13■■□□□ 1.45
MBD3-207ENST00000590550 TXNDC2Q86VQ3 553 aa24.13■■□□□ 1.45
MBD3-207ENST00000590550 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
MBD3-207ENST00000590550 SMC5Q8IY18 1101 aa24.12■■□□□ 1.45
MBD3-207ENST00000590550 C22orf23Q9BZE7 217 aa24.12■■□□□ 1.45
MBD3-207ENST00000590550 IPO8O15397 1037 aaKnown RBP24.12■■□□□ 1.45
MBD3-207ENST00000590550 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
MBD3-207ENST00000590550 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
MBD3-207ENST00000590550 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
MBD3-207ENST00000590550 NFE2L2Q16236 605 aa24.08■■□□□ 1.45
MBD3-207ENST00000590550 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms