RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
APOC1-206ENST00000590334 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
APOC1-206ENST00000590334 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
APOC1-206ENST00000590334 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
APOC1-206ENST00000590334 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
APOC1-206ENST00000590334 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
APOC1-206ENST00000590334 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
APOC1-206ENST00000590334 ANKRD26Q9UPS8 1709 aa16.67■□□□□ 0.26
APOC1-206ENST00000590334 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
APOC1-206ENST00000590334 TNS3Q68CZ2 1445 aa16.64■□□□□ 0.25
APOC1-206ENST00000590334 CARD14Q9BXL6 1004 aa16.64■□□□□ 0.25
APOC1-206ENST00000590334 PANK3Q9H999 370 aa16.64■□□□□ 0.25
APOC1-206ENST00000590334 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
APOC1-206ENST00000590334 TTC21AQ8NDW8 1320 aa16.64■□□□□ 0.25
APOC1-206ENST00000590334 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
APOC1-206ENST00000590334 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
APOC1-206ENST00000590334 MED1Q15648 1581 aaPredicted RBP16.63■□□□□ 0.25
APOC1-206ENST00000590334 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
APOC1-206ENST00000590334 TTC21BQ7Z4L5 1316 aa16.62■□□□□ 0.25
APOC1-206ENST00000590334 PHRF1Q9P1Y6 1649 aaKnown RBP16.61■□□□□ 0.25
APOC1-206ENST00000590334 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
APOC1-206ENST00000590334 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
APOC1-206ENST00000590334 HSPA1LP34931 641 aa16.6■□□□□ 0.25
APOC1-206ENST00000590334 ARHGEF10O15013 1369 aa16.6■□□□□ 0.25
APOC1-206ENST00000590334 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
APOC1-206ENST00000590334 USP31Q70CQ4 1352 aa16.58■□□□□ 0.24
APOC1-206ENST00000590334 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
APOC1-206ENST00000590334 SLIT3O75094 1523 aa16.57■□□□□ 0.24
APOC1-206ENST00000590334 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
APOC1-206ENST00000590334 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 NSD2O96028 1365 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 JCADQ9P266 1359 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 NPC1L1Q9UHC9 1359 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.24
APOC1-206ENST00000590334 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
APOC1-206ENST00000590334 FYB1O15117 783 aa16.55■□□□□ 0.24
APOC1-206ENST00000590334 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
APOC1-206ENST00000590334 USP19O94966 1318 aa16.54■□□□□ 0.24
APOC1-206ENST00000590334 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
APOC1-206ENST00000590334 NME9Q86XW9 330 aa16.54■□□□□ 0.24
APOC1-206ENST00000590334 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
APOC1-206ENST00000590334 LTN1O94822 1766 aa16.53■□□□□ 0.24
APOC1-206ENST00000590334 NFAT5O94916 1531 aa16.52■□□□□ 0.24
APOC1-206ENST00000590334 NLRP6P59044 892 aa16.52■□□□□ 0.24
APOC1-206ENST00000590334 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
APOC1-206ENST00000590334 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
APOC1-206ENST00000590334 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
APOC1-206ENST00000590334 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
APOC1-206ENST00000590334 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
APOC1-206ENST00000590334 NUTM2GQ5VZR2 741 aa16.49■□□□□ 0.23
APOC1-206ENST00000590334 COG3Q96JB2 828 aa16.49■□□□□ 0.23
APOC1-206ENST00000590334 COL18A1P39060 1754 aa16.47■□□□□ 0.23
APOC1-206ENST00000590334 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
APOC1-206ENST00000590334 COL14A1Q05707 1796 aaKnown RBP16.46■□□□□ 0.23
APOC1-206ENST00000590334 GCP02774 474 aa16.46■□□□□ 0.23
APOC1-206ENST00000590334 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
APOC1-206ENST00000590334 ABCC6O95255 1503 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 LRP6O75581 1613 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
APOC1-206ENST00000590334 CPDO75976 1380 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 PLCH1Q4KWH8 1693 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 LMO7Q8WWI1 1683 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
APOC1-206ENST00000590334 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
APOC1-206ENST00000590334 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
APOC1-206ENST00000590334 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
APOC1-206ENST00000590334 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
APOC1-206ENST00000590334 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
APOC1-206ENST00000590334 NRAPQ86VF7 1730 aa16.4■□□□□ 0.22
APOC1-206ENST00000590334 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.4■□□□□ 0.22
APOC1-206ENST00000590334 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
APOC1-206ENST00000590334 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
APOC1-206ENST00000590334 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
APOC1-206ENST00000590334 KIAA0232Q92628 1395 aa16.39■□□□□ 0.21
APOC1-206ENST00000590334 NUTM2BA6NNL0 878 aaPredicted RBP16.39■□□□□ 0.21
APOC1-206ENST00000590334 NUTM2EB1AL46 878 aaPredicted RBP16.39■□□□□ 0.21
APOC1-206ENST00000590334 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
APOC1-206ENST00000590334 NUTM2AQ8IVF1 878 aaPredicted RBP16.39■□□□□ 0.21
APOC1-206ENST00000590334 ZC3H6P61129 1189 aaKnown RBP16.38■□□□□ 0.21
APOC1-206ENST00000590334 RALBP1Q15311 655 aa16.38■□□□□ 0.21
APOC1-206ENST00000590334 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
APOC1-206ENST00000590334 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
APOC1-206ENST00000590334 SOX12O15370 315 aa16.37■□□□□ 0.21
APOC1-206ENST00000590334 FBLN1P23142 703 aa16.37■□□□□ 0.21
APOC1-206ENST00000590334 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
APOC1-206ENST00000590334 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
APOC1-206ENST00000590334 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
APOC1-206ENST00000590334 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
APOC1-206ENST00000590334 SLIT2O94813 1529 aa16.36■□□□□ 0.21
APOC1-206ENST00000590334 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
APOC1-206ENST00000590334 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
APOC1-206ENST00000590334 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
APOC1-206ENST00000590334 ADAMTS2O95450 1211 aa16.35■□□□□ 0.21
APOC1-206ENST00000590334 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
APOC1-206ENST00000590334 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
APOC1-206ENST00000590334 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms