RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
MBD1-222ENST00000590208 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
MBD1-222ENST00000590208 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.73
MBD1-222ENST00000590208 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
MBD1-222ENST00000590208 BAG4O95429 457 aaKnown RBP19.63■□□□□ 0.73
MBD1-222ENST00000590208 ANKRD45Q5TZF3 282 aa19.63■□□□□ 0.73
MBD1-222ENST00000590208 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
MBD1-222ENST00000590208 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
MBD1-222ENST00000590208 ANP32BQ92688 251 aaKnown RBP19.63■□□□□ 0.73
MBD1-222ENST00000590208 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
MBD1-222ENST00000590208 TBC1D9Q6ZT07 1266 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
MBD1-222ENST00000590208 NCLP19338 710 aaKnown RBP19.62■□□□□ 0.73
MBD1-222ENST00000590208 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 BMP2KLQ5H9B9 411 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 R3HCC1Q9Y3T6 440 aaKnown RBP19.62■□□□□ 0.73
MBD1-222ENST00000590208 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
MBD1-222ENST00000590208 ASXL2Q76L83 1435 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 GOLGA6L22H0YM25 854 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 TMPOP42166 694 aaKnown RBP19.61■□□□□ 0.73
MBD1-222ENST00000590208 FAM13BQ9NYF5 915 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 CD109Q6YHK3 1445 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 MAP3K4Q9Y6R4 1608 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 PTMSP20962 102 aa19.61■□□□□ 0.73
MBD1-222ENST00000590208 TMEM132EQ6IEE7 984 aa19.6■□□□□ 0.73
MBD1-222ENST00000590208 MCTP1Q6DN14 999 aa19.59■□□□□ 0.73
MBD1-222ENST00000590208 CAVIN1Q6NZI2 390 aaKnown RBP19.59■□□□□ 0.73
MBD1-222ENST00000590208 KIF3BO15066 747 aa19.58■□□□□ 0.73
MBD1-222ENST00000590208 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.73
MBD1-222ENST00000590208 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.73
MBD1-222ENST00000590208 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.73
MBD1-222ENST00000590208 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.73
MBD1-222ENST00000590208 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.72
MBD1-222ENST00000590208 NOS1P29475 1434 aa19.57■□□□□ 0.72
MBD1-222ENST00000590208 PKP1Q13835 747 aa19.57■□□□□ 0.72
MBD1-222ENST00000590208 ARID3AQ99856 593 aa19.57■□□□□ 0.72
MBD1-222ENST00000590208 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
MBD1-222ENST00000590208 RBSNQ9H1K0 784 aa19.57■□□□□ 0.72
MBD1-222ENST00000590208 PLCH2O75038 1416 aa19.56■□□□□ 0.72
MBD1-222ENST00000590208 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
MBD1-222ENST00000590208 ZSCAN23Q3MJ62 389 aa19.55■□□□□ 0.72
MBD1-222ENST00000590208 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
MBD1-222ENST00000590208 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
MBD1-222ENST00000590208 ADGRB2O60241 1585 aa19.55■□□□□ 0.72
MBD1-222ENST00000590208 MYOM2P54296 1465 aa19.54■□□□□ 0.72
MBD1-222ENST00000590208 IBTKQ9P2D0 1353 aaPredicted RBP19.54■□□□□ 0.72
MBD1-222ENST00000590208 FAM69CQ0P6D2 419 aa19.54■□□□□ 0.72
MBD1-222ENST00000590208 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
MBD1-222ENST00000590208 KIF16BQ96L93 1317 aa19.54■□□□□ 0.72
MBD1-222ENST00000590208 PRIM1P49642 420 aaKnown RBP19.54■□□□□ 0.72
MBD1-222ENST00000590208 ZNF445P59923 1031 aa19.54■□□□□ 0.72
MBD1-222ENST00000590208 CALD1Q05682 793 aaKnown RBP19.54■□□□□ 0.72
MBD1-222ENST00000590208 PPIP5K1Q6PFW1 1433 aa19.54■□□□□ 0.72
MBD1-222ENST00000590208 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
MBD1-222ENST00000590208 CHAMP1Q96JM3 812 aa19.53■□□□□ 0.72
MBD1-222ENST00000590208 LMBRD1Q9NUN5 540 aa19.53■□□□□ 0.72
MBD1-222ENST00000590208 RBM27Q9P2N5 1060 aaKnown RBP19.53■□□□□ 0.72
MBD1-222ENST00000590208 ABCC1P33527 1531 aa19.52■□□□□ 0.72
MBD1-222ENST00000590208 TET3O43151 1660 aa19.52■□□□□ 0.72
MBD1-222ENST00000590208 NOL7Q9UMY1 257 aaKnown RBP19.52■□□□□ 0.72
MBD1-222ENST00000590208 ABCC11Q96J66 1382 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 UQCRHLA0A096LP55 91 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 ZBTB7BO15156 539 aaPredicted RBP19.51■□□□□ 0.71
MBD1-222ENST00000590208 UQCRHP07919 91 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 CFAP74Q9C0B2 1584 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 SIRT2Q8IXJ6 389 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 PRDM4Q9UKN5 801 aa19.51■□□□□ 0.71
MBD1-222ENST00000590208 ADGRL1O94910 1474 aa19.5■□□□□ 0.71
MBD1-222ENST00000590208 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
MBD1-222ENST00000590208 TERF1P54274 439 aa19.49■□□□□ 0.71
MBD1-222ENST00000590208 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
MBD1-222ENST00000590208 PDLIM2Q96JY6 352 aa19.49■□□□□ 0.71
MBD1-222ENST00000590208 ZNF500O60304 480 aaPredicted RBP19.48■□□□□ 0.71
MBD1-222ENST00000590208 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
MBD1-222ENST00000590208 GCC1Q96CN9 775 aa19.48■□□□□ 0.71
MBD1-222ENST00000590208 GSPT1P15170 499 aaKnown RBP19.48■□□□□ 0.71
MBD1-222ENST00000590208 CDC45O75419 566 aa19.48■□□□□ 0.71
MBD1-222ENST00000590208 GPT2Q8TD30 523 aa19.48■□□□□ 0.71
MBD1-222ENST00000590208 ZFYVE16Q7Z3T8 1539 aa19.47■□□□□ 0.71
MBD1-222ENST00000590208 ZGPATQ8N5A5 531 aaKnown RBP19.47■□□□□ 0.71
MBD1-222ENST00000590208 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
MBD1-222ENST00000590208 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
MBD1-222ENST00000590208 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
MBD1-222ENST00000590208 CYP2E1P05181 493 aaPredicted RBP19.46■□□□□ 0.71
MBD1-222ENST00000590208 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
MBD1-222ENST00000590208 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
MBD1-222ENST00000590208 IL16Q14005 1332 aa19.46■□□□□ 0.71
MBD1-222ENST00000590208 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
MBD1-222ENST00000590208 C14orf93Q9H972 538 aaKnown RBP19.46■□□□□ 0.71
MBD1-222ENST00000590208 DEPDC5O75140 1603 aa19.46■□□□□ 0.71
MBD1-222ENST00000590208 NUCB2P80303 420 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 ALDH1L2Q3SY69 923 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 NSFL1CQ9UNZ2 370 aaKnown RBP19.45■□□□□ 0.7
MBD1-222ENST00000590208 KIF1BO60333 1816 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms