RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 ZKSCAN2Q63HK3 967 aa26.64■■□□□ 1.85
ZNF554-203ENST00000590116 PREX1Q8TCU6 1659 aa26.64■■□□□ 1.85
ZNF554-203ENST00000590116 TMEM131LA2VDJ0 1609 aa26.64■■□□□ 1.85
ZNF554-203ENST00000590116 CD163L1Q9NR16 1453 aa26.63■■□□□ 1.85
ZNF554-203ENST00000590116 RWDD1Q9H446 243 aaPredicted RBP26.63■■□□□ 1.85
ZNF554-203ENST00000590116 TERF2IPQ9NYB0 399 aa26.62■■□□□ 1.85
ZNF554-203ENST00000590116 DZIP1LQ8IYY4 767 aaKnown RBP26.62■■□□□ 1.85
ZNF554-203ENST00000590116 ATAD2Q6PL18 1390 aa26.62■■□□□ 1.85
ZNF554-203ENST00000590116 RTN4Q9NQC3 1192 aaKnown RBP26.61■■□□□ 1.85
ZNF554-203ENST00000590116 YTHDC2Q9H6S0 1430 aaKnown RBP26.6■■□□□ 1.85
ZNF554-203ENST00000590116 SSH1Q8WYL5 1049 aa26.6■■□□□ 1.85
ZNF554-203ENST00000590116 TRIM27P14373 513 aa26.59■■□□□ 1.85
ZNF554-203ENST00000590116 FBLN1P23142 703 aa26.59■■□□□ 1.85
ZNF554-203ENST00000590116 CT47B1P0C2W7 299 aaPredicted RBP26.58■■□□□ 1.85
ZNF554-203ENST00000590116 ANKRD26Q9UPS8 1709 aa26.58■■□□□ 1.85
ZNF554-203ENST00000590116 ITPRIPQ8IWB1 547 aa26.57■■□□□ 1.84
ZNF554-203ENST00000590116 SLKQ9H2G2 1235 aaPredicted RBP26.57■■□□□ 1.84
ZNF554-203ENST00000590116 RIPK4P57078 832 aa26.56■■□□□ 1.84
ZNF554-203ENST00000590116 CDK19Q9BWU1 502 aa26.56■■□□□ 1.84
ZNF554-203ENST00000590116 CABP1Q9NZU7 370 aa26.56■■□□□ 1.84
ZNF554-203ENST00000590116 CLTCQ00610 1675 aaKnown RBP26.54■■□□□ 1.84
ZNF554-203ENST00000590116 BECN1Q14457 450 aa26.54■■□□□ 1.84
ZNF554-203ENST00000590116 UPF2Q9HAU5 1272 aaKnown RBP26.54■■□□□ 1.84
ZNF554-203ENST00000590116 NOB1Q9ULX3 412 aaKnown RBP26.54■■□□□ 1.84
ZNF554-203ENST00000590116 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
ZNF554-203ENST00000590116 DIAPH1O60610 1272 aaKnown RBP26.54■■□□□ 1.84
ZNF554-203ENST00000590116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.54■■□□□ 1.84
ZNF554-203ENST00000590116 HDGFL2Q7Z4V5 671 aaPredicted RBP26.53■■□□□ 1.84
ZNF554-203ENST00000590116 BRPF3Q9ULD4 1205 aa26.53■■□□□ 1.84
ZNF554-203ENST00000590116 MED14O60244 1454 aa26.53■■□□□ 1.84
ZNF554-203ENST00000590116 ALKQ9UM73 1620 aa26.52■■□□□ 1.84
ZNF554-203ENST00000590116 TBC1D32Q96NH3 1257 aa26.51■■□□□ 1.83
ZNF554-203ENST00000590116 STAG3Q9UJ98 1225 aa26.51■■□□□ 1.83
ZNF554-203ENST00000590116 ATF7IPQ6VMQ6 1270 aa26.5■■□□□ 1.83
ZNF554-203ENST00000590116 KIF20BQ96Q89 1820 aa26.5■■□□□ 1.83
ZNF554-203ENST00000590116 TMEM57Q8N5G2 664 aa26.49■■□□□ 1.83
ZNF554-203ENST00000590116 IL16Q14005 1332 aa26.49■■□□□ 1.83
ZNF554-203ENST00000590116 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
ZNF554-203ENST00000590116 DDX19BQ9UMR2 479 aa26.48■■□□□ 1.83
ZNF554-203ENST00000590116 ARHGEF40Q8TER5 1519 aa26.48■■□□□ 1.83
ZNF554-203ENST00000590116 LRRC7Q96NW7 1537 aa26.48■■□□□ 1.83
ZNF554-203ENST00000590116 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
ZNF554-203ENST00000590116 PRKAR2BP31323 418 aa26.45■■□□□ 1.82
ZNF554-203ENST00000590116 PNNQ9H307 717 aaKnown RBP26.45■■□□□ 1.82
ZNF554-203ENST00000590116 HDAC1Q13547 482 aaPredicted RBP26.44■■□□□ 1.82
ZNF554-203ENST00000590116 TBC1D2Q9BYX2 928 aa26.44■■□□□ 1.82
ZNF554-203ENST00000590116 SPRYD3Q8NCJ5 442 aa26.44■■□□□ 1.82
ZNF554-203ENST00000590116 THUMPD2Q9BTF0 503 aaKnown RBP26.44■■□□□ 1.82
ZNF554-203ENST00000590116 HMOX1P09601 288 aa26.43■■□□□ 1.82
ZNF554-203ENST00000590116 MFAP1P55081 439 aaKnown RBP26.42■■□□□ 1.82
ZNF554-203ENST00000590116 POLKQ9UBT6 870 aa26.42■■□□□ 1.82
ZNF554-203ENST00000590116 FCHSD2O94868 740 aa26.41■■□□□ 1.82
ZNF554-203ENST00000590116 RSPH6AQ9H0K4 717 aa26.41■■□□□ 1.82
ZNF554-203ENST00000590116 KIF16BQ96L93 1317 aa26.41■■□□□ 1.82
ZNF554-203ENST00000590116 PHACTR3Q96KR7 559 aa26.4■■□□□ 1.82
ZNF554-203ENST00000590116 ANTXR1Q9H6X2 564 aa26.4■■□□□ 1.82
ZNF554-203ENST00000590116 ZBTB40Q9NUA8 1239 aa26.39■■□□□ 1.82
ZNF554-203ENST00000590116 IPO8O15397 1037 aaKnown RBP26.39■■□□□ 1.81
ZNF554-203ENST00000590116 EMILIN1Q9Y6C2 1016 aa26.38■■□□□ 1.81
ZNF554-203ENST00000590116 FAM135BQ49AJ0 1406 aa26.38■■□□□ 1.81
ZNF554-203ENST00000590116 CYB5RLQ6IPT4 315 aa26.37■■□□□ 1.81
ZNF554-203ENST00000590116 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
ZNF554-203ENST00000590116 MAP2P11137 1827 aaKnown RBP26.37■■□□□ 1.81
ZNF554-203ENST00000590116 SMC5Q8IY18 1101 aa26.37■■□□□ 1.81
ZNF554-203ENST00000590116 MLECQ14165 292 aa26.36■■□□□ 1.81
ZNF554-203ENST00000590116 CDC42BPGQ6DT37 1551 aa26.35■■□□□ 1.81
ZNF554-203ENST00000590116 ALDH1L2Q3SY69 923 aa26.34■■□□□ 1.81
ZNF554-203ENST00000590116 C22orf23Q9BZE7 217 aa26.34■■□□□ 1.81
ZNF554-203ENST00000590116 TSPOAP1O95153 1857 aa26.34■■□□□ 1.81
ZNF554-203ENST00000590116 NME9Q86XW9 330 aa26.34■■□□□ 1.81
ZNF554-203ENST00000590116 ELL2O00472 640 aaPredicted RBP26.33■■□□□ 1.81
ZNF554-203ENST00000590116 LNPKQ9C0E8 428 aa26.33■■□□□ 1.81
ZNF554-203ENST00000590116 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
ZNF554-203ENST00000590116 TSPYL6Q8N831 410 aa26.33■■□□□ 1.81
ZNF554-203ENST00000590116 C1orf115Q9H7X2 142 aa26.33■■□□□ 1.81
ZNF554-203ENST00000590116 A2ML1A8K2U0 1454 aa26.33■■□□□ 1.8
ZNF554-203ENST00000590116 ATP7BP35670 1465 aa26.33■■□□□ 1.8
ZNF554-203ENST00000590116 RIMBP3CA6NJZ7 1639 aa26.32■■□□□ 1.8
ZNF554-203ENST00000590116 RIMBP3BA6NNM3 1639 aa26.32■■□□□ 1.8
ZNF554-203ENST00000590116 RIMBP3Q9UFD9 1639 aa26.32■■□□□ 1.8
ZNF554-203ENST00000590116 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
ZNF554-203ENST00000590116 FAM69CQ0P6D2 419 aa26.31■■□□□ 1.8
ZNF554-203ENST00000590116 SETD1AO15047 1707 aaKnown RBP26.31■■□□□ 1.8
ZNF554-203ENST00000590116 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
ZNF554-203ENST00000590116 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
ZNF554-203ENST00000590116 PPIP5K1Q6PFW1 1433 aa26.28■■□□□ 1.8
ZNF554-203ENST00000590116 NUCB1Q02818 461 aa26.27■■□□□ 1.8
ZNF554-203ENST00000590116 RRS1Q15050 365 aaKnown RBP26.27■■□□□ 1.8
ZNF554-203ENST00000590116 VAMP4O75379 141 aa26.26■■□□□ 1.79
ZNF554-203ENST00000590116 IL13P35225 146 aa26.26■■□□□ 1.79
ZNF554-203ENST00000590116 TXNDC2Q86VQ3 553 aa26.26■■□□□ 1.79
ZNF554-203ENST00000590116 ZNF428Q96B54 188 aa26.26■■□□□ 1.79
ZNF554-203ENST00000590116 MRPL50Q8N5N7 158 aaKnown RBP26.25■■□□□ 1.79
ZNF554-203ENST00000590116 MBIPQ9NS73 344 aa26.25■■□□□ 1.79
ZNF554-203ENST00000590116 METP08581 1390 aa26.24■■□□□ 1.79
ZNF554-203ENST00000590116 FAM83GA6ND36 823 aa26.24■■□□□ 1.79
ZNF554-203ENST00000590116 WASLO00401 505 aaPredicted RBP26.24■■□□□ 1.79
ZNF554-203ENST00000590116 CHD1LQ86WJ1 897 aa26.24■■□□□ 1.79
ZNF554-203ENST00000590116 BRPF1P55201 1214 aaPredicted RBP26.23■■□□□ 1.79
ZNF554-203ENST00000590116 EDC4Q6P2E9 1401 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms