RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
GPATCH1-202ENST00000590062 ALS2Q96Q42 1657 aa16.95■□□□□ 0.3
GPATCH1-202ENST00000590062 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
GPATCH1-202ENST00000590062 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
GPATCH1-202ENST00000590062 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
GPATCH1-202ENST00000590062 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
GPATCH1-202ENST00000590062 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
GPATCH1-202ENST00000590062 WASHC2AQ641Q2 1341 aa16.94■□□□□ 0.3
GPATCH1-202ENST00000590062 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
GPATCH1-202ENST00000590062 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
GPATCH1-202ENST00000590062 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
GPATCH1-202ENST00000590062 KTN1Q86UP2 1357 aaKnown RBP16.92■□□□□ 0.3
GPATCH1-202ENST00000590062 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
GPATCH1-202ENST00000590062 LMOD2Q6P5Q4 547 aa16.91■□□□□ 0.3
GPATCH1-202ENST00000590062 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
GPATCH1-202ENST00000590062 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
GPATCH1-202ENST00000590062 PIK3C2AO00443 1686 aa16.88■□□□□ 0.29
GPATCH1-202ENST00000590062 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
GPATCH1-202ENST00000590062 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
GPATCH1-202ENST00000590062 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 LRP6O75581 1613 aa16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
GPATCH1-202ENST00000590062 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
GPATCH1-202ENST00000590062 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
GPATCH1-202ENST00000590062 USP19O94966 1318 aa16.85■□□□□ 0.29
GPATCH1-202ENST00000590062 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
GPATCH1-202ENST00000590062 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
GPATCH1-202ENST00000590062 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
GPATCH1-202ENST00000590062 PANK3Q9H999 370 aa16.84■□□□□ 0.29
GPATCH1-202ENST00000590062 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
GPATCH1-202ENST00000590062 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
GPATCH1-202ENST00000590062 SLIT3O75094 1523 aa16.83■□□□□ 0.28
GPATCH1-202ENST00000590062 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
GPATCH1-202ENST00000590062 PHRF1Q9P1Y6 1649 aaKnown RBP16.83■□□□□ 0.28
GPATCH1-202ENST00000590062 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
GPATCH1-202ENST00000590062 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
GPATCH1-202ENST00000590062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
GPATCH1-202ENST00000590062 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
GPATCH1-202ENST00000590062 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
GPATCH1-202ENST00000590062 NME9Q86XW9 330 aa16.8■□□□□ 0.28
GPATCH1-202ENST00000590062 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
GPATCH1-202ENST00000590062 NLRP6P59044 892 aa16.79■□□□□ 0.28
GPATCH1-202ENST00000590062 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
GPATCH1-202ENST00000590062 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
GPATCH1-202ENST00000590062 NSD2O96028 1365 aa16.78■□□□□ 0.28
GPATCH1-202ENST00000590062 FYB1O15117 783 aa16.78■□□□□ 0.28
GPATCH1-202ENST00000590062 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
GPATCH1-202ENST00000590062 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
GPATCH1-202ENST00000590062 NFAT5O94916 1531 aa16.77■□□□□ 0.28
GPATCH1-202ENST00000590062 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
GPATCH1-202ENST00000590062 CPDO75976 1380 aa16.77■□□□□ 0.27
GPATCH1-202ENST00000590062 NPC1L1Q9UHC9 1359 aa16.77■□□□□ 0.27
GPATCH1-202ENST00000590062 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
GPATCH1-202ENST00000590062 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
GPATCH1-202ENST00000590062 GCP02774 474 aa16.75■□□□□ 0.27
GPATCH1-202ENST00000590062 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
GPATCH1-202ENST00000590062 KCNH5Q8NCM2 988 aa16.75■□□□□ 0.27
GPATCH1-202ENST00000590062 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
GPATCH1-202ENST00000590062 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
GPATCH1-202ENST00000590062 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
GPATCH1-202ENST00000590062 COG3Q96JB2 828 aa16.74■□□□□ 0.27
GPATCH1-202ENST00000590062 PLCH1Q4KWH8 1693 aa16.74■□□□□ 0.27
GPATCH1-202ENST00000590062 AFF2P51816 1311 aa16.73■□□□□ 0.27
GPATCH1-202ENST00000590062 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
GPATCH1-202ENST00000590062 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
GPATCH1-202ENST00000590062 ABCC6O95255 1503 aa16.72■□□□□ 0.27
GPATCH1-202ENST00000590062 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
GPATCH1-202ENST00000590062 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
GPATCH1-202ENST00000590062 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.71■□□□□ 0.27
GPATCH1-202ENST00000590062 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
GPATCH1-202ENST00000590062 SLIT2O94813 1529 aa16.7■□□□□ 0.26
GPATCH1-202ENST00000590062 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 AATKQ6ZMQ8 1374 aa16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 FNBP4Q8N3X1 1017 aaPredicted RBP16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 USP21Q9UK80 565 aa16.69■□□□□ 0.26
GPATCH1-202ENST00000590062 SOX12O15370 315 aa16.68■□□□□ 0.26
GPATCH1-202ENST00000590062 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
GPATCH1-202ENST00000590062 COL18A1P39060 1754 aa16.67■□□□□ 0.26
GPATCH1-202ENST00000590062 FAM83GA6ND36 823 aa16.67■□□□□ 0.26
GPATCH1-202ENST00000590062 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
GPATCH1-202ENST00000590062 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
GPATCH1-202ENST00000590062 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
GPATCH1-202ENST00000590062 LTN1O94822 1766 aa16.66■□□□□ 0.26
GPATCH1-202ENST00000590062 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 TRPC5Q9UL62 973 aaPredicted RBP16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 BCL9LQ86UU0 1499 aa16.65■□□□□ 0.26
GPATCH1-202ENST00000590062 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
GPATCH1-202ENST00000590062 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
GPATCH1-202ENST00000590062 CAMTA1Q9Y6Y1 1673 aa16.64■□□□□ 0.25
GPATCH1-202ENST00000590062 MAP3K19Q56UN5 1328 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms