RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
RETREG3-208ENST00000589797 ABCA8O94911 1581 aa18.09■□□□□ 0.49
RETREG3-208ENST00000589797 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
RETREG3-208ENST00000589797 TRIM27P14373 513 aa18.08■□□□□ 0.49
RETREG3-208ENST00000589797 NPHP1O15259 732 aa18.08■□□□□ 0.48
RETREG3-208ENST00000589797 RLBP1P12271 317 aa18.08■□□□□ 0.48
RETREG3-208ENST00000589797 ATF3P18847 181 aa18.07■□□□□ 0.48
RETREG3-208ENST00000589797 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
RETREG3-208ENST00000589797 F6X3S4 739 aa18.07■□□□□ 0.48
RETREG3-208ENST00000589797 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
RETREG3-208ENST00000589797 PCDHB15Q9Y5E8 787 aa18.07■□□□□ 0.48
RETREG3-208ENST00000589797 MCCP23508 829 aa18.06■□□□□ 0.48
RETREG3-208ENST00000589797 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
RETREG3-208ENST00000589797 ACEP12821 1306 aa18.06■□□□□ 0.48
RETREG3-208ENST00000589797 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
RETREG3-208ENST00000589797 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
RETREG3-208ENST00000589797 ANKLE2Q86XL3 938 aa18.06■□□□□ 0.48
RETREG3-208ENST00000589797 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
RETREG3-208ENST00000589797 EVA1CP58658 441 aa18.05■□□□□ 0.48
RETREG3-208ENST00000589797 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
RETREG3-208ENST00000589797 RAPGEF4Q8WZA2 1011 aa18.05■□□□□ 0.48
RETREG3-208ENST00000589797 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
RETREG3-208ENST00000589797 PLA2R1Q13018 1463 aa18.04■□□□□ 0.48
RETREG3-208ENST00000589797 UGGT1Q9NYU2 1555 aa18.04■□□□□ 0.48
RETREG3-208ENST00000589797 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
RETREG3-208ENST00000589797 GCC2Q8IWJ2 1684 aa18.03■□□□□ 0.48
RETREG3-208ENST00000589797 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
RETREG3-208ENST00000589797 HDGFL1Q5TGJ6 251 aa18.03■□□□□ 0.48
RETREG3-208ENST00000589797 TTC37Q6PGP7 1564 aa18.02■□□□□ 0.48
RETREG3-208ENST00000589797 COL17A1Q9UMD9 1497 aaPredicted RBP18.02■□□□□ 0.47
RETREG3-208ENST00000589797 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
RETREG3-208ENST00000589797 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-208ENST00000589797 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
RETREG3-208ENST00000589797 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
RETREG3-208ENST00000589797 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
RETREG3-208ENST00000589797 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
RETREG3-208ENST00000589797 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
RETREG3-208ENST00000589797 A0A1W2PP64 1363 aa18■□□□□ 0.47
RETREG3-208ENST00000589797 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
RETREG3-208ENST00000589797 PTMAP06454 111 aaKnown RBP18■□□□□ 0.47
RETREG3-208ENST00000589797 GORABQ5T7V8 394 aa18■□□□□ 0.47
RETREG3-208ENST00000589797 UBTFL1P0CB47 393 aaPredicted RBP17.99■□□□□ 0.47
RETREG3-208ENST00000589797 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
RETREG3-208ENST00000589797 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
RETREG3-208ENST00000589797 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
RETREG3-208ENST00000589797 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
RETREG3-208ENST00000589797 YEATS2Q9ULM3 1422 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 IL1RAPL2Q9NP60 686 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
RETREG3-208ENST00000589797 ANXA1P04083 346 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 NPATQ14207 1427 aa17.98■□□□□ 0.47
RETREG3-208ENST00000589797 GSE1Q14687 1217 aa17.97■□□□□ 0.47
RETREG3-208ENST00000589797 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
RETREG3-208ENST00000589797 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
RETREG3-208ENST00000589797 CCDC30Q5VVM6 783 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 MYL6BP14649 208 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
RETREG3-208ENST00000589797 DDX54Q8TDD1 881 aaKnown RBP17.95■□□□□ 0.46
RETREG3-208ENST00000589797 ST18O60284 1047 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 ATP10AO60312 1499 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 LRRIQ1Q96JM4 1722 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 ZMYM3Q14202 1370 aa17.94■□□□□ 0.46
RETREG3-208ENST00000589797 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
RETREG3-208ENST00000589797 TNRQ92752 1358 aa17.93■□□□□ 0.46
RETREG3-208ENST00000589797 SIL1Q9H173 461 aa17.93■□□□□ 0.46
RETREG3-208ENST00000589797 CHD1O14646 1710 aa17.92■□□□□ 0.46
RETREG3-208ENST00000589797 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
RETREG3-208ENST00000589797 GOLGA6L4A6NEF3 574 aa17.92■□□□□ 0.46
RETREG3-208ENST00000589797 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
RETREG3-208ENST00000589797 IFIT2P09913 472 aaKnown RBP17.91■□□□□ 0.46
RETREG3-208ENST00000589797 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
RETREG3-208ENST00000589797 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
RETREG3-208ENST00000589797 PLEKHO1Q53GL0 409 aaPredicted RBP17.91■□□□□ 0.46
RETREG3-208ENST00000589797 KCNA6P17658 529 aa17.91■□□□□ 0.46
RETREG3-208ENST00000589797 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
RETREG3-208ENST00000589797 DIAPH3Q9NSV4 1193 aa17.91■□□□□ 0.46
RETREG3-208ENST00000589797 DDX49Q9Y6V7 483 aaKnown RBP17.91■□□□□ 0.46
RETREG3-208ENST00000589797 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 GNAI2P04899 355 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 CT47B1P0C2W7 299 aaPredicted RBP17.9■□□□□ 0.46
RETREG3-208ENST00000589797 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
RETREG3-208ENST00000589797 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 SEC24BO95487 1268 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 GPATCH3Q96I76 525 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
RETREG3-208ENST00000589797 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
RETREG3-208ENST00000589797 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
RETREG3-208ENST00000589797 CDC45O75419 566 aa17.89■□□□□ 0.45
RETREG3-208ENST00000589797 AAMPQ13685 434 aa17.89■□□□□ 0.45
RETREG3-208ENST00000589797 REC8O95072 547 aa17.89■□□□□ 0.45
RETREG3-208ENST00000589797 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms