RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
RANBP3-216ENST00000589353 DCCP43146 1447 aa13.34□□□□□ -0.27
RANBP3-216ENST00000589353 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
RANBP3-216ENST00000589353 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
RANBP3-216ENST00000589353 MTHFSP49914 203 aa13.33□□□□□ -0.28
RANBP3-216ENST00000589353 NUDCQ9Y266 331 aa13.33□□□□□ -0.28
RANBP3-216ENST00000589353 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
RANBP3-216ENST00000589353 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
RANBP3-216ENST00000589353 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
RANBP3-216ENST00000589353 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
RANBP3-216ENST00000589353 NME9Q86XW9 330 aa13.32□□□□□ -0.28
RANBP3-216ENST00000589353 MSH6P52701 1360 aa13.32□□□□□ -0.28
RANBP3-216ENST00000589353 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
RANBP3-216ENST00000589353 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
RANBP3-216ENST00000589353 PSME1Q06323 249 aa13.3□□□□□ -0.28
RANBP3-216ENST00000589353 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
RANBP3-216ENST00000589353 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
RANBP3-216ENST00000589353 NRKQ7Z2Y5 1582 aa13.29□□□□□ -0.28
RANBP3-216ENST00000589353 PNNQ9H307 717 aaKnown RBP13.29□□□□□ -0.28
RANBP3-216ENST00000589353 SSH2Q76I76 1423 aa13.29□□□□□ -0.28
RANBP3-216ENST00000589353 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
RANBP3-216ENST00000589353 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-216ENST00000589353 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
RANBP3-216ENST00000589353 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.28
RANBP3-216ENST00000589353 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.29
RANBP3-216ENST00000589353 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
RANBP3-216ENST00000589353 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
RANBP3-216ENST00000589353 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
RANBP3-216ENST00000589353 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
RANBP3-216ENST00000589353 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
RANBP3-216ENST00000589353 ZNF335Q9H4Z2 1342 aaPredicted RBP13.25□□□□□ -0.29
RANBP3-216ENST00000589353 NLRP6P59044 892 aa13.25□□□□□ -0.29
RANBP3-216ENST00000589353 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
RANBP3-216ENST00000589353 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
RANBP3-216ENST00000589353 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
RANBP3-216ENST00000589353 PNPLA6Q8IY17 1366 aa13.24□□□□□ -0.29
RANBP3-216ENST00000589353 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
RANBP3-216ENST00000589353 NEFMP07197 916 aa13.24□□□□□ -0.29
RANBP3-216ENST00000589353 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
RANBP3-216ENST00000589353 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
RANBP3-216ENST00000589353 MST1RQ04912 1400 aa13.23□□□□□ -0.29
RANBP3-216ENST00000589353 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
RANBP3-216ENST00000589353 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
RANBP3-216ENST00000589353 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
RANBP3-216ENST00000589353 RUNDC1Q96C34 613 aa13.23□□□□□ -0.29
RANBP3-216ENST00000589353 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
RANBP3-216ENST00000589353 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
RANBP3-216ENST00000589353 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
RANBP3-216ENST00000589353 FOXO3O43524 673 aa13.22□□□□□ -0.29
RANBP3-216ENST00000589353 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
RANBP3-216ENST00000589353 KCNH5Q8NCM2 988 aa13.22□□□□□ -0.29
RANBP3-216ENST00000589353 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
RANBP3-216ENST00000589353 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
RANBP3-216ENST00000589353 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
RANBP3-216ENST00000589353 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
RANBP3-216ENST00000589353 USP54Q70EL1 1684 aa13.21□□□□□ -0.3
RANBP3-216ENST00000589353 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
RANBP3-216ENST00000589353 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-216ENST00000589353 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
RANBP3-216ENST00000589353 FCHSD2O94868 740 aa13.19□□□□□ -0.3
RANBP3-216ENST00000589353 AMPHP49418 695 aa13.19□□□□□ -0.3
RANBP3-216ENST00000589353 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
RANBP3-216ENST00000589353 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
RANBP3-216ENST00000589353 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
RANBP3-216ENST00000589353 CCDC146Q8IYE0 955 aa13.18□□□□□ -0.3
RANBP3-216ENST00000589353 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
RANBP3-216ENST00000589353 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
RANBP3-216ENST00000589353 FLT4P35916 1363 aa13.18□□□□□ -0.3
RANBP3-216ENST00000589353 APAF1O14727 1248 aa13.17□□□□□ -0.3
RANBP3-216ENST00000589353 NEFLP07196 543 aa13.16□□□□□ -0.3
RANBP3-216ENST00000589353 IL13P35225 146 aa13.16□□□□□ -0.3
RANBP3-216ENST00000589353 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
RANBP3-216ENST00000589353 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
RANBP3-216ENST00000589353 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
RANBP3-216ENST00000589353 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
RANBP3-216ENST00000589353 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
RANBP3-216ENST00000589353 SOX12O15370 315 aa13.15□□□□□ -0.3
RANBP3-216ENST00000589353 FBLN1P23142 703 aa13.15□□□□□ -0.3
RANBP3-216ENST00000589353 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-216ENST00000589353 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
RANBP3-216ENST00000589353 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
RANBP3-216ENST00000589353 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
RANBP3-216ENST00000589353 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-216ENST00000589353 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
RANBP3-216ENST00000589353 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
RANBP3-216ENST00000589353 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
RANBP3-216ENST00000589353 USP19O94966 1318 aa13.13□□□□□ -0.31
RANBP3-216ENST00000589353 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
RANBP3-216ENST00000589353 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
RANBP3-216ENST00000589353 GCP02774 474 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 HOXC9P31274 260 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 IP6K1Q92551 441 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
RANBP3-216ENST00000589353 MARF1Q9Y4F3 1742 aaKnown RBP13.1□□□□□ -0.31
RANBP3-216ENST00000589353 SLIT3O75094 1523 aa13.1□□□□□ -0.31
RANBP3-216ENST00000589353 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
RANBP3-216ENST00000589353 E9PSI1 815 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms