RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
CLPTM1-211ENST00000589347 BAG6P46379 1132 aa15.2■□□□□ 0.02
CLPTM1-211ENST00000589347 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
CLPTM1-211ENST00000589347 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
CLPTM1-211ENST00000589347 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
CLPTM1-211ENST00000589347 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 KRT27Q7Z3Y8 459 aa15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 TNS1Q9HBL0 1735 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
CLPTM1-211ENST00000589347 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
CLPTM1-211ENST00000589347 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
CLPTM1-211ENST00000589347 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
CLPTM1-211ENST00000589347 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
CLPTM1-211ENST00000589347 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
CLPTM1-211ENST00000589347 NBPF1Q3BBV0 1214 aa15.15■□□□□ 0.02
CLPTM1-211ENST00000589347 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
CLPTM1-211ENST00000589347 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
CLPTM1-211ENST00000589347 COL14A1Q05707 1796 aaKnown RBP15.15■□□□□ 0.02
CLPTM1-211ENST00000589347 NUDT16Q96DE0 195 aaKnown RBP15.14■□□□□ 0.01
CLPTM1-211ENST00000589347 AKAP12Q02952 1782 aa15.13■□□□□ 0.01
CLPTM1-211ENST00000589347 CDK19Q9BWU1 502 aa15.13■□□□□ 0.01
CLPTM1-211ENST00000589347 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
CLPTM1-211ENST00000589347 YY1P25490 414 aa15.12■□□□□ 0.01
CLPTM1-211ENST00000589347 R3HDM1Q15032 1099 aaKnown RBP15.12■□□□□ 0.01
CLPTM1-211ENST00000589347 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-211ENST00000589347 EN1Q05925 392 aaPredicted RBP15.11■□□□□ 0.01
CLPTM1-211ENST00000589347 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
CLPTM1-211ENST00000589347 CCDC61Q9Y6R9 512 aa15.1■□□□□ 0.01
CLPTM1-211ENST00000589347 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
CLPTM1-211ENST00000589347 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
CLPTM1-211ENST00000589347 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
CLPTM1-211ENST00000589347 RREB1Q92766 1687 aa15.09■□□□□ 0.01
CLPTM1-211ENST00000589347 NRKQ7Z2Y5 1582 aa15.08■□□□□ 0
CLPTM1-211ENST00000589347 MON2Q7Z3U7 1717 aa15.07■□□□□ 0
CLPTM1-211ENST00000589347 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CLPTM1-211ENST00000589347 ACEP12821 1306 aa15.07■□□□□ 0
CLPTM1-211ENST00000589347 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
CLPTM1-211ENST00000589347 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
CLPTM1-211ENST00000589347 PLEKHG5O94827 1062 aa15.06■□□□□ 0
CLPTM1-211ENST00000589347 FAM98CQ17RN3 349 aaKnown RBP15.06■□□□□ 0
CLPTM1-211ENST00000589347 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
CLPTM1-211ENST00000589347 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
CLPTM1-211ENST00000589347 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
CLPTM1-211ENST00000589347 PLEKHG3A1L390 1219 aa15.05■□□□□ -0
CLPTM1-211ENST00000589347 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
CLPTM1-211ENST00000589347 FAM83GA6ND36 823 aa15.04■□□□□ -0
CLPTM1-211ENST00000589347 CAMKK2Q96RR4 588 aa15.04■□□□□ -0
CLPTM1-211ENST00000589347 CABP2Q9NPB3 220 aa15.04■□□□□ -0
CLPTM1-211ENST00000589347 PIK3C2AO00443 1686 aa15.03■□□□□ -0
CLPTM1-211ENST00000589347 A0A0G2JS52 829 aa15.03■□□□□ -0
CLPTM1-211ENST00000589347 MYT1Q01538 1121 aa15.03■□□□□ -0
CLPTM1-211ENST00000589347 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
CLPTM1-211ENST00000589347 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
CLPTM1-211ENST00000589347 USP6P35125 1406 aa15.02■□□□□ -0
CLPTM1-211ENST00000589347 UTRNP46939 3433 aa15.02■□□□□ -0
CLPTM1-211ENST00000589347 FAM182BQ5T319 152 aa15.02■□□□□ -0
CLPTM1-211ENST00000589347 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
CLPTM1-211ENST00000589347 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
CLPTM1-211ENST00000589347 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
CLPTM1-211ENST00000589347 CLSPNQ9HAW4 1339 aa15□□□□□ -0.01
CLPTM1-211ENST00000589347 PRDM11Q9NQV5 511 aa15□□□□□ -0.01
CLPTM1-211ENST00000589347 BTG4Q9NY30 223 aa15□□□□□ -0.01
CLPTM1-211ENST00000589347 USP54Q70EL1 1684 aa15□□□□□ -0.01
CLPTM1-211ENST00000589347 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
CLPTM1-211ENST00000589347 LMO7Q8WWI1 1683 aa14.99□□□□□ -0.01
CLPTM1-211ENST00000589347 KIAA0232Q92628 1395 aa14.98□□□□□ -0.01
CLPTM1-211ENST00000589347 SLIT3O75094 1523 aa14.97□□□□□ -0.01
CLPTM1-211ENST00000589347 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
CLPTM1-211ENST00000589347 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
CLPTM1-211ENST00000589347 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
CLPTM1-211ENST00000589347 WNK3Q9BYP7 1800 aa14.96□□□□□ -0.01
CLPTM1-211ENST00000589347 USP19O94966 1318 aa14.96□□□□□ -0.01
CLPTM1-211ENST00000589347 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
CLPTM1-211ENST00000589347 TRIM37O94972 964 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 NUTM2GQ5VZR2 741 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 LTN1O94822 1766 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 CPDO75976 1380 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
CLPTM1-211ENST00000589347 RGPD5Q99666 1765 aa14.94□□□□□ -0.02
CLPTM1-211ENST00000589347 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
CLPTM1-211ENST00000589347 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
CLPTM1-211ENST00000589347 SPATA31A1Q5TZJ5 1347 aa14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
CLPTM1-211ENST00000589347 CPSF1Q10570 1443 aaKnown RBP14.92□□□□□ -0.02
CLPTM1-211ENST00000589347 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
CLPTM1-211ENST00000589347 ABCC6O95255 1503 aa14.92□□□□□ -0.02
CLPTM1-211ENST00000589347 CASZ1Q86V15 1759 aa14.91□□□□□ -0.02
CLPTM1-211ENST00000589347 USP47Q96K76 1375 aa14.91□□□□□ -0.02
CLPTM1-211ENST00000589347 APBA3O96018 575 aa14.91□□□□□ -0.02
CLPTM1-211ENST00000589347 NLRP6P59044 892 aa14.91□□□□□ -0.02
CLPTM1-211ENST00000589347 ZC3H6P61129 1189 aaKnown RBP14.91□□□□□ -0.02
CLPTM1-211ENST00000589347 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms