RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PXDNQ92626 1479 aa16.72■□□□□ 0.27
DNMT1-218ENST00000589294 MYOM1P52179 1685 aa16.72■□□□□ 0.27
DNMT1-218ENST00000589294 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
DNMT1-218ENST00000589294 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
DNMT1-218ENST00000589294 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
DNMT1-218ENST00000589294 HSPA1LP34931 641 aa16.69■□□□□ 0.26
DNMT1-218ENST00000589294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.69■□□□□ 0.26
DNMT1-218ENST00000589294 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
DNMT1-218ENST00000589294 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
DNMT1-218ENST00000589294 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
DNMT1-218ENST00000589294 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
DNMT1-218ENST00000589294 FYB1O15117 783 aa16.67■□□□□ 0.26
DNMT1-218ENST00000589294 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
DNMT1-218ENST00000589294 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
DNMT1-218ENST00000589294 LMOD2Q6P5Q4 547 aa16.66■□□□□ 0.26
DNMT1-218ENST00000589294 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
DNMT1-218ENST00000589294 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
DNMT1-218ENST00000589294 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
DNMT1-218ENST00000589294 NLRP6P59044 892 aa16.65■□□□□ 0.26
DNMT1-218ENST00000589294 USP31Q70CQ4 1352 aa16.64■□□□□ 0.26
DNMT1-218ENST00000589294 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-218ENST00000589294 NME9Q86XW9 330 aa16.64■□□□□ 0.25
DNMT1-218ENST00000589294 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-218ENST00000589294 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
DNMT1-218ENST00000589294 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-218ENST00000589294 JCADQ9P266 1359 aa16.63■□□□□ 0.25
DNMT1-218ENST00000589294 COG3Q96JB2 828 aa16.62■□□□□ 0.25
DNMT1-218ENST00000589294 NSD2O96028 1365 aa16.62■□□□□ 0.25
DNMT1-218ENST00000589294 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
DNMT1-218ENST00000589294 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
DNMT1-218ENST00000589294 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
DNMT1-218ENST00000589294 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
DNMT1-218ENST00000589294 ZRANB1Q9UGI0 708 aa16.6■□□□□ 0.25
DNMT1-218ENST00000589294 PNPLA6Q8IY17 1366 aa16.6■□□□□ 0.25
DNMT1-218ENST00000589294 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
DNMT1-218ENST00000589294 GCP02774 474 aa16.58■□□□□ 0.24
DNMT1-218ENST00000589294 MORC1Q86VD1 984 aa16.58■□□□□ 0.24
DNMT1-218ENST00000589294 USP19O94966 1318 aa16.58■□□□□ 0.24
DNMT1-218ENST00000589294 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
DNMT1-218ENST00000589294 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
DNMT1-218ENST00000589294 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
DNMT1-218ENST00000589294 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
DNMT1-218ENST00000589294 CC2D1BQ5T0F9 858 aaKnown RBP16.56■□□□□ 0.24
DNMT1-218ENST00000589294 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
DNMT1-218ENST00000589294 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-218ENST00000589294 COL22A1Q8NFW1 1626 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-218ENST00000589294 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
DNMT1-218ENST00000589294 MED1Q15648 1581 aaPredicted RBP16.53■□□□□ 0.24
DNMT1-218ENST00000589294 RALBP1Q15311 655 aa16.53■□□□□ 0.24
DNMT1-218ENST00000589294 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
DNMT1-218ENST00000589294 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
DNMT1-218ENST00000589294 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
DNMT1-218ENST00000589294 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.23
DNMT1-218ENST00000589294 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
DNMT1-218ENST00000589294 SLIT3O75094 1523 aa16.51■□□□□ 0.23
DNMT1-218ENST00000589294 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-218ENST00000589294 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-218ENST00000589294 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
DNMT1-218ENST00000589294 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-218ENST00000589294 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
DNMT1-218ENST00000589294 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
DNMT1-218ENST00000589294 CPDO75976 1380 aa16.5■□□□□ 0.23
DNMT1-218ENST00000589294 SOX12O15370 315 aa16.49■□□□□ 0.23
DNMT1-218ENST00000589294 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-218ENST00000589294 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
DNMT1-218ENST00000589294 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-218ENST00000589294 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
DNMT1-218ENST00000589294 ANP32CO43423 234 aa16.48■□□□□ 0.23
DNMT1-218ENST00000589294 FBLN1P23142 703 aa16.48■□□□□ 0.23
DNMT1-218ENST00000589294 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
DNMT1-218ENST00000589294 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
DNMT1-218ENST00000589294 NFAT5O94916 1531 aa16.46■□□□□ 0.23
DNMT1-218ENST00000589294 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
DNMT1-218ENST00000589294 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
DNMT1-218ENST00000589294 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
DNMT1-218ENST00000589294 PPP2R1AP30153 589 aa16.45■□□□□ 0.22
DNMT1-218ENST00000589294 AMPHP49418 695 aa16.45■□□□□ 0.22
DNMT1-218ENST00000589294 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
DNMT1-218ENST00000589294 IP6K1Q92551 441 aa16.45■□□□□ 0.22
DNMT1-218ENST00000589294 PHRF1Q9P1Y6 1649 aaKnown RBP16.45■□□□□ 0.22
DNMT1-218ENST00000589294 MTHFSP49914 203 aa16.44■□□□□ 0.22
DNMT1-218ENST00000589294 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
DNMT1-218ENST00000589294 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
DNMT1-218ENST00000589294 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
DNMT1-218ENST00000589294 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
DNMT1-218ENST00000589294 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
DNMT1-218ENST00000589294 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
DNMT1-218ENST00000589294 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
DNMT1-218ENST00000589294 FNBP4Q8N3X1 1017 aaPredicted RBP16.42■□□□□ 0.22
DNMT1-218ENST00000589294 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
DNMT1-218ENST00000589294 RTL1A6NKG5 1358 aa16.41■□□□□ 0.22
DNMT1-218ENST00000589294 HOXC9P31274 260 aa16.41■□□□□ 0.22
DNMT1-218ENST00000589294 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
DNMT1-218ENST00000589294 AXIN2Q9Y2T1 843 aa16.41■□□□□ 0.22
DNMT1-218ENST00000589294 LRP6O75581 1613 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms