RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 POLR3AO14802 1390 aaPredicted RBP12.82□□□□□ -0.36
ZNF440-206ENST00000588954 JCADQ9P266 1359 aa12.82□□□□□ -0.36
ZNF440-206ENST00000588954 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
ZNF440-206ENST00000588954 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
ZNF440-206ENST00000588954 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
ZNF440-206ENST00000588954 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
ZNF440-206ENST00000588954 PXDNQ92626 1479 aa12.81□□□□□ -0.36
ZNF440-206ENST00000588954 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
ZNF440-206ENST00000588954 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
ZNF440-206ENST00000588954 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
ZNF440-206ENST00000588954 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
ZNF440-206ENST00000588954 ARHGEF10O15013 1369 aa12.79□□□□□ -0.36
ZNF440-206ENST00000588954 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
ZNF440-206ENST00000588954 USP6P35125 1406 aa12.78□□□□□ -0.36
ZNF440-206ENST00000588954 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
ZNF440-206ENST00000588954 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
ZNF440-206ENST00000588954 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
ZNF440-206ENST00000588954 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
ZNF440-206ENST00000588954 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
ZNF440-206ENST00000588954 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
ZNF440-206ENST00000588954 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
ZNF440-206ENST00000588954 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
ZNF440-206ENST00000588954 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
ZNF440-206ENST00000588954 KIF7Q2M1P5 1343 aa12.76□□□□□ -0.37
ZNF440-206ENST00000588954 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
ZNF440-206ENST00000588954 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
ZNF440-206ENST00000588954 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
ZNF440-206ENST00000588954 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
ZNF440-206ENST00000588954 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
ZNF440-206ENST00000588954 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
ZNF440-206ENST00000588954 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
ZNF440-206ENST00000588954 NLRP6P59044 892 aa12.74□□□□□ -0.37
ZNF440-206ENST00000588954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF440-206ENST00000588954 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
ZNF440-206ENST00000588954 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
ZNF440-206ENST00000588954 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
ZNF440-206ENST00000588954 CCDC7Q96M83 1385 aa12.73□□□□□ -0.37
ZNF440-206ENST00000588954 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
ZNF440-206ENST00000588954 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
ZNF440-206ENST00000588954 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
ZNF440-206ENST00000588954 AKAP12Q02952 1782 aa12.72□□□□□ -0.37
ZNF440-206ENST00000588954 TRPM3Q9HCF6 1732 aaPredicted RBP12.72□□□□□ -0.37
ZNF440-206ENST00000588954 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
ZNF440-206ENST00000588954 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
ZNF440-206ENST00000588954 SSH2Q76I76 1423 aa12.71□□□□□ -0.37
ZNF440-206ENST00000588954 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.37
ZNF440-206ENST00000588954 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
ZNF440-206ENST00000588954 PANK3Q9H999 370 aa12.71□□□□□ -0.37
ZNF440-206ENST00000588954 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
ZNF440-206ENST00000588954 MON2Q7Z3U7 1717 aa12.7□□□□□ -0.38
ZNF440-206ENST00000588954 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
ZNF440-206ENST00000588954 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
ZNF440-206ENST00000588954 NME9Q86XW9 330 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 COG3Q96JB2 828 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 KNSTRNQ9Y448 316 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
ZNF440-206ENST00000588954 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
ZNF440-206ENST00000588954 MYOM1P52179 1685 aa12.68□□□□□ -0.38
ZNF440-206ENST00000588954 GCP02774 474 aa12.67□□□□□ -0.38
ZNF440-206ENST00000588954 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
ZNF440-206ENST00000588954 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
ZNF440-206ENST00000588954 MED1Q15648 1581 aaPredicted RBP12.67□□□□□ -0.38
ZNF440-206ENST00000588954 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
ZNF440-206ENST00000588954 USP19O94966 1318 aa12.66□□□□□ -0.38
ZNF440-206ENST00000588954 NRKQ7Z2Y5 1582 aa12.66□□□□□ -0.38
ZNF440-206ENST00000588954 FYB1O15117 783 aa12.66□□□□□ -0.38
ZNF440-206ENST00000588954 SOX12O15370 315 aa12.65□□□□□ -0.38
ZNF440-206ENST00000588954 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
ZNF440-206ENST00000588954 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
ZNF440-206ENST00000588954 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
ZNF440-206ENST00000588954 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
ZNF440-206ENST00000588954 LRP6O75581 1613 aa12.65□□□□□ -0.38
ZNF440-206ENST00000588954 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
ZNF440-206ENST00000588954 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
ZNF440-206ENST00000588954 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
ZNF440-206ENST00000588954 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
ZNF440-206ENST00000588954 ZNF772Q68DY9 489 aaPredicted RBP12.63□□□□□ -0.39
ZNF440-206ENST00000588954 NSD2O96028 1365 aa12.62□□□□□ -0.39
ZNF440-206ENST00000588954 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
ZNF440-206ENST00000588954 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
ZNF440-206ENST00000588954 AFF2P51816 1311 aa12.62□□□□□ -0.39
ZNF440-206ENST00000588954 CPDO75976 1380 aa12.61□□□□□ -0.39
ZNF440-206ENST00000588954 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
ZNF440-206ENST00000588954 USP21Q9UK80 565 aa12.61□□□□□ -0.39
ZNF440-206ENST00000588954 SLIT3O75094 1523 aa12.61□□□□□ -0.39
ZNF440-206ENST00000588954 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
ZNF440-206ENST00000588954 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
ZNF440-206ENST00000588954 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
ZNF440-206ENST00000588954 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
ZNF440-206ENST00000588954 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
ZNF440-206ENST00000588954 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
ZNF440-206ENST00000588954 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
ZNF440-206ENST00000588954 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
ZNF440-206ENST00000588954 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
ZNF440-206ENST00000588954 EVA1CP58658 441 aa12.59□□□□□ -0.39
ZNF440-206ENST00000588954 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
ZNF440-206ENST00000588954 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
ZNF440-206ENST00000588954 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms