RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 ILDR1Q86SU0 546 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-213ENST00000587988 PANK3Q9H999 370 aa14.81□□□□□ -0.04
SMARCA4-213ENST00000587988 SBNO1A3KN83 1393 aa14.81□□□□□ -0.04
SMARCA4-213ENST00000587988 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-213ENST00000587988 SPATA31A3Q5VYP0 1347 aa14.8□□□□□ -0.04
SMARCA4-213ENST00000587988 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
SMARCA4-213ENST00000587988 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
SMARCA4-213ENST00000587988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCA4-213ENST00000587988 ALS2Q96Q42 1657 aa14.78□□□□□ -0.04
SMARCA4-213ENST00000587988 TNS3Q68CZ2 1445 aa14.78□□□□□ -0.04
SMARCA4-213ENST00000587988 NUTM2GQ5VZR2 741 aa14.78□□□□□ -0.04
SMARCA4-213ENST00000587988 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
SMARCA4-213ENST00000587988 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-213ENST00000587988 NSD3Q9BZ95 1437 aa14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 BRD4O60885 1362 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 PNPLA6Q8IY17 1366 aa14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 NME9Q86XW9 330 aa14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
SMARCA4-213ENST00000587988 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
SMARCA4-213ENST00000587988 TTC21AQ8NDW8 1320 aa14.75□□□□□ -0.05
SMARCA4-213ENST00000587988 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
SMARCA4-213ENST00000587988 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-213ENST00000587988 JCADQ9P266 1359 aa14.74□□□□□ -0.05
SMARCA4-213ENST00000587988 PER1O15534 1290 aaPredicted RBP14.74□□□□□ -0.05
SMARCA4-213ENST00000587988 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
SMARCA4-213ENST00000587988 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
SMARCA4-213ENST00000587988 FYB1O15117 783 aa14.73□□□□□ -0.05
SMARCA4-213ENST00000587988 CABLES1Q8TDN4 633 aa14.73□□□□□ -0.05
SMARCA4-213ENST00000587988 NLRP6P59044 892 aa14.72□□□□□ -0.05
SMARCA4-213ENST00000587988 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-213ENST00000587988 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-213ENST00000587988 GGNBP2Q9H3C7 697 aa14.71□□□□□ -0.05
SMARCA4-213ENST00000587988 KNSTRNQ9Y448 316 aa14.71□□□□□ -0.05
SMARCA4-213ENST00000587988 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-213ENST00000587988 KIF20BQ96Q89 1820 aa14.71□□□□□ -0.06
SMARCA4-213ENST00000587988 CRYBG1Q9Y4K1 1723 aa14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 NUTM2BA6NNL0 878 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 NUTM2EB1AL46 878 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 NLRP13Q86W25 1043 aa14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 NUTM2AQ8IVF1 878 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 USP31Q70CQ4 1352 aa14.7□□□□□ -0.06
SMARCA4-213ENST00000587988 CGNL1Q0VF96 1302 aa14.69□□□□□ -0.06
SMARCA4-213ENST00000587988 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-213ENST00000587988 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
SMARCA4-213ENST00000587988 USP19O94966 1318 aa14.68□□□□□ -0.06
SMARCA4-213ENST00000587988 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
SMARCA4-213ENST00000587988 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
SMARCA4-213ENST00000587988 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
SMARCA4-213ENST00000587988 SPATA31A6Q5VVP1 1343 aa14.67□□□□□ -0.06
SMARCA4-213ENST00000587988 LRP6O75581 1613 aa14.67□□□□□ -0.06
SMARCA4-213ENST00000587988 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-213ENST00000587988 COG3Q96JB2 828 aa14.67□□□□□ -0.06
SMARCA4-213ENST00000587988 SLIT3O75094 1523 aa14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 SOX12O15370 315 aa14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 GCP02774 474 aa14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 FBLN1P23142 703 aa14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
SMARCA4-213ENST00000587988 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
SMARCA4-213ENST00000587988 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-213ENST00000587988 ANKRD26Q9UPS8 1709 aa14.64□□□□□ -0.07
SMARCA4-213ENST00000587988 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-213ENST00000587988 NSD2O96028 1365 aa14.63□□□□□ -0.07
SMARCA4-213ENST00000587988 NFAT5O94916 1531 aa14.63□□□□□ -0.07
SMARCA4-213ENST00000587988 NPC1L1Q9UHC9 1359 aa14.62□□□□□ -0.07
SMARCA4-213ENST00000587988 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
SMARCA4-213ENST00000587988 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
SMARCA4-213ENST00000587988 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
SMARCA4-213ENST00000587988 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-213ENST00000587988 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
SMARCA4-213ENST00000587988 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
SMARCA4-213ENST00000587988 RRS1Q15050 365 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-213ENST00000587988 CHRNA2Q15822 529 aa14.6□□□□□ -0.07
SMARCA4-213ENST00000587988 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
SMARCA4-213ENST00000587988 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-213ENST00000587988 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
SMARCA4-213ENST00000587988 PRDM11Q9NQV5 511 aa14.59□□□□□ -0.07
SMARCA4-213ENST00000587988 CPDO75976 1380 aa14.59□□□□□ -0.07
SMARCA4-213ENST00000587988 LTN1O94822 1766 aa14.58□□□□□ -0.08
SMARCA4-213ENST00000587988 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-213ENST00000587988 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
SMARCA4-213ENST00000587988 MAP3K19Q56UN5 1328 aa14.57□□□□□ -0.08
SMARCA4-213ENST00000587988 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
SMARCA4-213ENST00000587988 COL18A1P39060 1754 aa14.57□□□□□ -0.08
SMARCA4-213ENST00000587988 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
SMARCA4-213ENST00000587988 POLKQ9UBT6 870 aa14.56□□□□□ -0.08
SMARCA4-213ENST00000587988 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
SMARCA4-213ENST00000587988 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
SMARCA4-213ENST00000587988 COL14A1Q05707 1796 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-213ENST00000587988 PARD3Q8TEW0 1356 aa14.55□□□□□ -0.08
SMARCA4-213ENST00000587988 LMO7Q8WWI1 1683 aa14.55□□□□□ -0.08
SMARCA4-213ENST00000587988 RGPD5Q99666 1765 aa14.55□□□□□ -0.08
SMARCA4-213ENST00000587988 FNBP4Q8N3X1 1017 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 AFF2P51816 1311 aa14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 SLIT2O94813 1529 aa14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 PLCH1Q4KWH8 1693 aa14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 CAMTA1Q9Y6Y1 1673 aa14.54□□□□□ -0.08
SMARCA4-213ENST00000587988 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms