RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
RUNDC3A-203ENST00000587483 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
RUNDC3A-203ENST00000587483 ANKRD45Q5TZF3 282 aa14.04□□□□□ -0.16
RUNDC3A-203ENST00000587483 MLECQ14165 292 aa14.03□□□□□ -0.16
RUNDC3A-203ENST00000587483 ADGRB1O14514 1584 aa14.03□□□□□ -0.16
RUNDC3A-203ENST00000587483 PPLO60437 1756 aa14.03□□□□□ -0.16
RUNDC3A-203ENST00000587483 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
RUNDC3A-203ENST00000587483 NUTM2FA1L443 756 aa14.03□□□□□ -0.16
RUNDC3A-203ENST00000587483 GOLGA6L3A6NEY3 463 aa14.02□□□□□ -0.16
RUNDC3A-203ENST00000587483 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
RUNDC3A-203ENST00000587483 SSH1Q8WYL5 1049 aa14.02□□□□□ -0.17
RUNDC3A-203ENST00000587483 USP32Q8NFA0 1604 aa14.01□□□□□ -0.17
RUNDC3A-203ENST00000587483 ZMYM3Q14202 1370 aa14.01□□□□□ -0.17
RUNDC3A-203ENST00000587483 NPATQ14207 1427 aa14.01□□□□□ -0.17
RUNDC3A-203ENST00000587483 ZBTB7CA1YPR0 619 aa14.01□□□□□ -0.17
RUNDC3A-203ENST00000587483 TRIM27P14373 513 aa14□□□□□ -0.17
RUNDC3A-203ENST00000587483 PANK2Q9BZ23 570 aa14□□□□□ -0.17
RUNDC3A-203ENST00000587483 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
RUNDC3A-203ENST00000587483 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
RUNDC3A-203ENST00000587483 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
RUNDC3A-203ENST00000587483 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
RUNDC3A-203ENST00000587483 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
RUNDC3A-203ENST00000587483 LMTK2Q8IWU2 1503 aa13.98□□□□□ -0.17
RUNDC3A-203ENST00000587483 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
RUNDC3A-203ENST00000587483 ADGRB2O60241 1585 aa13.98□□□□□ -0.17
RUNDC3A-203ENST00000587483 CD109Q6YHK3 1445 aa13.98□□□□□ -0.17
RUNDC3A-203ENST00000587483 GLI2P10070 1586 aa13.98□□□□□ -0.17
RUNDC3A-203ENST00000587483 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
RUNDC3A-203ENST00000587483 TRAK2O60296 914 aa13.96□□□□□ -0.17
RUNDC3A-203ENST00000587483 TMPOP42166 694 aaKnown RBP13.96□□□□□ -0.17
RUNDC3A-203ENST00000587483 MCM4P33991 863 aa13.96□□□□□ -0.17
RUNDC3A-203ENST00000587483 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
RUNDC3A-203ENST00000587483 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
RUNDC3A-203ENST00000587483 ATF7IPQ6VMQ6 1270 aa13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 ARHGEF28Q8N1W1 1705 aaKnown RBP13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 NSD2O96028 1365 aa13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
RUNDC3A-203ENST00000587483 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
RUNDC3A-203ENST00000587483 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
RUNDC3A-203ENST00000587483 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
RUNDC3A-203ENST00000587483 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
RUNDC3A-203ENST00000587483 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
RUNDC3A-203ENST00000587483 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
RUNDC3A-203ENST00000587483 DCTN1Q14203 1278 aa13.92□□□□□ -0.18
RUNDC3A-203ENST00000587483 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
RUNDC3A-203ENST00000587483 SMC5Q8IY18 1101 aa13.92□□□□□ -0.18
RUNDC3A-203ENST00000587483 CAMSAP1Q5T5Y3 1602 aa13.92□□□□□ -0.18
RUNDC3A-203ENST00000587483 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
RUNDC3A-203ENST00000587483 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 ABCC11Q96J66 1382 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 ARID3AQ99856 593 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
RUNDC3A-203ENST00000587483 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
RUNDC3A-203ENST00000587483 COL3A1P02461 1466 aaPredicted RBP13.9□□□□□ -0.18
RUNDC3A-203ENST00000587483 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
RUNDC3A-203ENST00000587483 FSD2A1L4K1 749 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 ABCC3O15438 1527 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 FYB1O15117 783 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
RUNDC3A-203ENST00000587483 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
RUNDC3A-203ENST00000587483 ESF1Q9H501 851 aaKnown RBP13.88□□□□□ -0.19
RUNDC3A-203ENST00000587483 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 NUCB1Q02818 461 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 IDI1Q13907 227 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
RUNDC3A-203ENST00000587483 IL16Q14005 1332 aa13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 CHD1LQ86WJ1 897 aa13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
RUNDC3A-203ENST00000587483 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
RUNDC3A-203ENST00000587483 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
RUNDC3A-203ENST00000587483 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
RUNDC3A-203ENST00000587483 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
RUNDC3A-203ENST00000587483 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
RUNDC3A-203ENST00000587483 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms