RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TNNQ9UQP3 1299 aa21.59■■□□□ 1.05
PRKCSH-205ENST00000587327 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
PRKCSH-205ENST00000587327 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.05
PRKCSH-205ENST00000587327 MINK1Q8N4C8 1332 aaPredicted RBP21.58■■□□□ 1.04
PRKCSH-205ENST00000587327 ZMYM3Q14202 1370 aa21.57■■□□□ 1.04
PRKCSH-205ENST00000587327 SRPK2P78362 688 aaKnown RBP21.57■■□□□ 1.04
PRKCSH-205ENST00000587327 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
PRKCSH-205ENST00000587327 ATAD2Q6PL18 1390 aa21.57■■□□□ 1.04
PRKCSH-205ENST00000587327 NRXN3Q9Y4C0 1643 aa21.57■■□□□ 1.04
PRKCSH-205ENST00000587327 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
PRKCSH-205ENST00000587327 CD163L1Q9NR16 1453 aa21.56■■□□□ 1.04
PRKCSH-205ENST00000587327 FRAT2O75474 233 aaPredicted RBP21.56■■□□□ 1.04
PRKCSH-205ENST00000587327 POGKQ9P215 609 aa21.55■■□□□ 1.04
PRKCSH-205ENST00000587327 RWDD1Q9H446 243 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-205ENST00000587327 NLRP1Q9C000 1473 aa21.54■■□□□ 1.04
PRKCSH-205ENST00000587327 ADGRB2O60241 1585 aa21.54■■□□□ 1.04
PRKCSH-205ENST00000587327 CT47B1P0C2W7 299 aaPredicted RBP21.53■■□□□ 1.04
PRKCSH-205ENST00000587327 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
PRKCSH-205ENST00000587327 ANKRD26Q9UPS8 1709 aa21.52■■□□□ 1.04
PRKCSH-205ENST00000587327 BECN1Q14457 450 aa21.52■■□□□ 1.04
PRKCSH-205ENST00000587327 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
PRKCSH-205ENST00000587327 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
PRKCSH-205ENST00000587327 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
PRKCSH-205ENST00000587327 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-205ENST00000587327 UPF2Q9HAU5 1272 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-205ENST00000587327 FTSJ3Q8IY81 847 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-205ENST00000587327 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
PRKCSH-205ENST00000587327 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-205ENST00000587327 MED14O60244 1454 aa21.47■■□□□ 1.03
PRKCSH-205ENST00000587327 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
PRKCSH-205ENST00000587327 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
PRKCSH-205ENST00000587327 TBC1D32Q96NH3 1257 aa21.47■■□□□ 1.03
PRKCSH-205ENST00000587327 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
PRKCSH-205ENST00000587327 TNRQ92752 1358 aa21.46■■□□□ 1.03
PRKCSH-205ENST00000587327 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
PRKCSH-205ENST00000587327 GGNBP2Q9H3C7 697 aa21.46■■□□□ 1.03
PRKCSH-205ENST00000587327 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
PRKCSH-205ENST00000587327 WAPLQ7Z5K2 1190 aa21.45■■□□□ 1.02
PRKCSH-205ENST00000587327 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.02
PRKCSH-205ENST00000587327 UBR1Q8IWV7 1749 aa21.45■■□□□ 1.02
PRKCSH-205ENST00000587327 COL3A1P02461 1466 aaPredicted RBP21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 METP08581 1390 aa21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 KNDC1Q76NI1 1749 aa21.44■■□□□ 1.02
PRKCSH-205ENST00000587327 FYB1O15117 783 aa21.43■■□□□ 1.02
PRKCSH-205ENST00000587327 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
PRKCSH-205ENST00000587327 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-205ENST00000587327 TRIM27P14373 513 aa21.42■■□□□ 1.02
PRKCSH-205ENST00000587327 IL16Q14005 1332 aa21.42■■□□□ 1.02
PRKCSH-205ENST00000587327 SSH1Q8WYL5 1049 aa21.41■■□□□ 1.02
PRKCSH-205ENST00000587327 ATP7BP35670 1465 aa21.41■■□□□ 1.02
PRKCSH-205ENST00000587327 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-205ENST00000587327 ANTXR1Q9H6X2 564 aa21.41■■□□□ 1.02
PRKCSH-205ENST00000587327 CABP1Q9NZU7 370 aa21.41■■□□□ 1.02
PRKCSH-205ENST00000587327 HDGFL2Q7Z4V5 671 aaPredicted RBP21.4■■□□□ 1.02
PRKCSH-205ENST00000587327 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
PRKCSH-205ENST00000587327 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
PRKCSH-205ENST00000587327 SLKQ9H2G2 1235 aaPredicted RBP21.4■■□□□ 1.02
PRKCSH-205ENST00000587327 TECPR2O15040 1411 aa21.39■■□□□ 1.01
PRKCSH-205ENST00000587327 CPS1P31327 1500 aa21.39■■□□□ 1.01
PRKCSH-205ENST00000587327 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
PRKCSH-205ENST00000587327 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
PRKCSH-205ENST00000587327 RIPK4P57078 832 aa21.37■■□□□ 1.01
PRKCSH-205ENST00000587327 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
PRKCSH-205ENST00000587327 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
PRKCSH-205ENST00000587327 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
PRKCSH-205ENST00000587327 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
PRKCSH-205ENST00000587327 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
PRKCSH-205ENST00000587327 FAM135BQ49AJ0 1406 aa21.36■■□□□ 1.01
PRKCSH-205ENST00000587327 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
PRKCSH-205ENST00000587327 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
PRKCSH-205ENST00000587327 SMC5Q8IY18 1101 aa21.33■■□□□ 1.01
PRKCSH-205ENST00000587327 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1
PRKCSH-205ENST00000587327 CPSF1Q10570 1443 aaKnown RBP21.33■■□□□ 1
PRKCSH-205ENST00000587327 ADAMTS13Q76LX8 1427 aa21.33■■□□□ 1
PRKCSH-205ENST00000587327 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1
PRKCSH-205ENST00000587327 KIF16BQ96L93 1317 aa21.32■■□□□ 1
PRKCSH-205ENST00000587327 PPIP5K1Q6PFW1 1433 aa21.32■■□□□ 1
PRKCSH-205ENST00000587327 IPO8O15397 1037 aaKnown RBP21.32■■□□□ 1
PRKCSH-205ENST00000587327 TMEM57Q8N5G2 664 aa21.32■■□□□ 1
PRKCSH-205ENST00000587327 FCHSD2O94868 740 aa21.31■■□□□ 1
PRKCSH-205ENST00000587327 C22orf23Q9BZE7 217 aa21.31■■□□□ 1
PRKCSH-205ENST00000587327 SIRT1Q96EB6 747 aa21.3■■□□□ 1
PRKCSH-205ENST00000587327 CDC42BPGQ6DT37 1551 aa21.3■■□□□ 1
PRKCSH-205ENST00000587327 ALDH1L2Q3SY69 923 aa21.3■■□□□ 1
PRKCSH-205ENST00000587327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.29■■□□□ 1
PRKCSH-205ENST00000587327 C3P01024 1663 aa21.29■■□□□ 1
PRKCSH-205ENST00000587327 MON2Q7Z3U7 1717 aa21.29■■□□□ 1
PRKCSH-205ENST00000587327 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
PRKCSH-205ENST00000587327 ROBO2Q9HCK4 1378 aa21.28■■□□□ 1
PRKCSH-205ENST00000587327 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
PRKCSH-205ENST00000587327 PLEKHG1Q9ULL1 1385 aa21.27■■□□□ 1
PRKCSH-205ENST00000587327 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-205ENST00000587327 AKAP12Q02952 1782 aa21.26■□□□□ 0.99
PRKCSH-205ENST00000587327 LTKP29376 864 aa21.26■□□□□ 0.99
PRKCSH-205ENST00000587327 BRPF1P55201 1214 aaPredicted RBP21.25■□□□□ 0.99
PRKCSH-205ENST00000587327 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
PRKCSH-205ENST00000587327 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms