RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PNPLA6Q8IY17 1366 aa9.13□□□□□ -0.95
NPC1-206ENST00000587223 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
NPC1-206ENST00000587223 POLR3GLQ9BT43 218 aa9.13□□□□□ -0.95
NPC1-206ENST00000587223 SLC12A5Q9H2X9 1139 aa9.13□□□□□ -0.95
NPC1-206ENST00000587223 ITSN1Q15811 1721 aa9.13□□□□□ -0.95
NPC1-206ENST00000587223 PXDNQ92626 1479 aa9.13□□□□□ -0.95
NPC1-206ENST00000587223 POLR3AO14802 1390 aaPredicted RBP9.12□□□□□ -0.95
NPC1-206ENST00000587223 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
NPC1-206ENST00000587223 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
NPC1-206ENST00000587223 ABTB2Q8N961 1025 aa9.12□□□□□ -0.95
NPC1-206ENST00000587223 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
NPC1-206ENST00000587223 DISP3Q9P2K9 1392 aa9.12□□□□□ -0.95
NPC1-206ENST00000587223 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
NPC1-206ENST00000587223 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
NPC1-206ENST00000587223 ARHGEF10O15013 1369 aa9.11□□□□□ -0.95
NPC1-206ENST00000587223 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
NPC1-206ENST00000587223 NUTM2GQ5VZR2 741 aa9.1□□□□□ -0.95
NPC1-206ENST00000587223 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
NPC1-206ENST00000587223 BRD4O60885 1362 aaPredicted RBP9.1□□□□□ -0.95
NPC1-206ENST00000587223 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
NPC1-206ENST00000587223 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
NPC1-206ENST00000587223 NLRP6P59044 892 aa9.09□□□□□ -0.95
NPC1-206ENST00000587223 NLRP13Q86W25 1043 aa9.09□□□□□ -0.95
NPC1-206ENST00000587223 C8orf37Q96NL8 207 aa9.09□□□□□ -0.95
NPC1-206ENST00000587223 TOPAZ1Q8N9V7 1692 aa9.09□□□□□ -0.95
NPC1-206ENST00000587223 TTC21BQ7Z4L5 1316 aa9.08□□□□□ -0.96
NPC1-206ENST00000587223 USP6P35125 1406 aa9.08□□□□□ -0.96
NPC1-206ENST00000587223 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
NPC1-206ENST00000587223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPC1-206ENST00000587223 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
NPC1-206ENST00000587223 MED1Q15648 1581 aaPredicted RBP9.07□□□□□ -0.96
NPC1-206ENST00000587223 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
NPC1-206ENST00000587223 CPSF1Q10570 1443 aaKnown RBP9.07□□□□□ -0.96
NPC1-206ENST00000587223 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
NPC1-206ENST00000587223 LRP6O75581 1613 aa9.06□□□□□ -0.96
NPC1-206ENST00000587223 ZNF772Q68DY9 489 aaPredicted RBP9.06□□□□□ -0.96
NPC1-206ENST00000587223 AFF2P51816 1311 aa9.05□□□□□ -0.96
NPC1-206ENST00000587223 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
NPC1-206ENST00000587223 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
NPC1-206ENST00000587223 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
NPC1-206ENST00000587223 RGS17Q9UGC6 210 aaPredicted RBP9.05□□□□□ -0.96
NPC1-206ENST00000587223 COL22A1Q8NFW1 1626 aaPredicted RBP9.05□□□□□ -0.96
NPC1-206ENST00000587223 SSH2Q76I76 1423 aa9.05□□□□□ -0.96
NPC1-206ENST00000587223 CD163L1Q9NR16 1453 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 ANKRD36BQ8N2N9 1353 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 GCP02774 474 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 NME9Q86XW9 330 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 FNBP4Q8N3X1 1017 aaPredicted RBP9.04□□□□□ -0.96
NPC1-206ENST00000587223 PRDM11Q9NQV5 511 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 USP21Q9UK80 565 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 AKAP12Q02952 1782 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
NPC1-206ENST00000587223 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 SOX12O15370 315 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 KCNH5Q8NCM2 988 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 QTRT2Q9H974 415 aaKnown RBP9.03□□□□□ -0.96
NPC1-206ENST00000587223 PANK3Q9H999 370 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 EDC4Q6P2E9 1401 aaKnown RBP9.03□□□□□ -0.96
NPC1-206ENST00000587223 KIF7Q2M1P5 1343 aa9.03□□□□□ -0.96
NPC1-206ENST00000587223 CHRNA2Q15822 529 aa9.02□□□□□ -0.97
NPC1-206ENST00000587223 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
NPC1-206ENST00000587223 COG3Q96JB2 828 aa9.02□□□□□ -0.97
NPC1-206ENST00000587223 USP19O94966 1318 aa9.02□□□□□ -0.97
NPC1-206ENST00000587223 USP31Q70CQ4 1352 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 KIAA0232Q92628 1395 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 FYB1O15117 783 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 RXRBP28702 533 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 EVA1CP58658 441 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 UNC5CLQ8IV45 518 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
NPC1-206ENST00000587223 TRPC5Q9UL62 973 aaPredicted RBP9.01□□□□□ -0.97
NPC1-206ENST00000587223 MON2Q7Z3U7 1717 aa9□□□□□ -0.97
NPC1-206ENST00000587223 ATXN8OSP0DMR3 200 aa9□□□□□ -0.97
NPC1-206ENST00000587223 CCDC9Q9Y3X0 531 aaKnown RBP9□□□□□ -0.97
NPC1-206ENST00000587223 KNSTRNQ9Y448 316 aa9□□□□□ -0.97
NPC1-206ENST00000587223 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
NPC1-206ENST00000587223 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
NPC1-206ENST00000587223 CCDC7Q96M83 1385 aa8.99□□□□□ -0.97
NPC1-206ENST00000587223 RBM6P78332 1123 aaKnown RBP8.99□□□□□ -0.97
NPC1-206ENST00000587223 ARHGEF25Q86VW2 580 aa8.99□□□□□ -0.97
NPC1-206ENST00000587223 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
NPC1-206ENST00000587223 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
NPC1-206ENST00000587223 CPDO75976 1380 aa8.99□□□□□ -0.97
NPC1-206ENST00000587223 NSD3Q9BZ95 1437 aa8.98□□□□□ -0.97
NPC1-206ENST00000587223 PIK3C2AO00443 1686 aa8.98□□□□□ -0.97
NPC1-206ENST00000587223 BCL9LQ86UU0 1499 aa8.98□□□□□ -0.97
NPC1-206ENST00000587223 ILDR2Q71H61 639 aa8.98□□□□□ -0.97
NPC1-206ENST00000587223 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
NPC1-206ENST00000587223 SLIT2O94813 1529 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 FBLN1P23142 703 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 VPS72Q15906 364 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 NRKQ7Z2Y5 1582 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 AATKQ6ZMQ8 1374 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
NPC1-206ENST00000587223 SLIT3O75094 1523 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms