RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 FAM69CQ0P6D2 419 aa21.29■■□□□ 1
CIRBP-212ENST00000587169 PANK2Q9BZ23 570 aa21.29■■□□□ 1
CIRBP-212ENST00000587169 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
CIRBP-212ENST00000587169 FYB1O15117 783 aa21.29■■□□□ 1
CIRBP-212ENST00000587169 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
CIRBP-212ENST00000587169 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
CIRBP-212ENST00000587169 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 1
CIRBP-212ENST00000587169 STAG3Q9UJ98 1225 aa21.27■■□□□ 1
CIRBP-212ENST00000587169 ZC3H13Q5T200 1668 aaKnown RBP21.26■□□□□ 0.99
CIRBP-212ENST00000587169 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
CIRBP-212ENST00000587169 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
CIRBP-212ENST00000587169 SMC5Q8IY18 1101 aa21.26■□□□□ 0.99
CIRBP-212ENST00000587169 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
CIRBP-212ENST00000587169 C1orf115Q9H7X2 142 aa21.26■□□□□ 0.99
CIRBP-212ENST00000587169 LMTK2Q8IWU2 1503 aa21.25■□□□□ 0.99
CIRBP-212ENST00000587169 PPLO60437 1756 aa21.25■□□□□ 0.99
CIRBP-212ENST00000587169 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
CIRBP-212ENST00000587169 CHMP5Q9NZZ3 219 aa21.24■□□□□ 0.99
CIRBP-212ENST00000587169 YEATS2Q9ULM3 1422 aa21.24■□□□□ 0.99
CIRBP-212ENST00000587169 L1TD1Q5T7N2 865 aaKnown RBP21.24■□□□□ 0.99
CIRBP-212ENST00000587169 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
CIRBP-212ENST00000587169 ZMYM3Q14202 1370 aa21.24■□□□□ 0.99
CIRBP-212ENST00000587169 GLI2P10070 1586 aa21.24■□□□□ 0.99
CIRBP-212ENST00000587169 ELL2O00472 640 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-212ENST00000587169 TRAK2O60296 914 aa21.23■□□□□ 0.99
CIRBP-212ENST00000587169 GOLGA6L3A6NEY3 463 aa21.23■□□□□ 0.99
CIRBP-212ENST00000587169 NSD2O96028 1365 aa21.23■□□□□ 0.99
CIRBP-212ENST00000587169 CT47B1P0C2W7 299 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-212ENST00000587169 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
CIRBP-212ENST00000587169 FOXD4L1Q9NU39 408 aa21.22■□□□□ 0.99
CIRBP-212ENST00000587169 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
CIRBP-212ENST00000587169 HSCBQ8IWL3 235 aa21.22■□□□□ 0.99
CIRBP-212ENST00000587169 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.22■□□□□ 0.99
CIRBP-212ENST00000587169 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
CIRBP-212ENST00000587169 ADGRB2O60241 1585 aa21.2■□□□□ 0.98
CIRBP-212ENST00000587169 HMOX1P09601 288 aa21.2■□□□□ 0.98
CIRBP-212ENST00000587169 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
CIRBP-212ENST00000587169 USP32Q8NFA0 1604 aa21.19■□□□□ 0.98
CIRBP-212ENST00000587169 NUCB1Q02818 461 aa21.19■□□□□ 0.98
CIRBP-212ENST00000587169 ZNF692Q9BU19 519 aaPredicted RBP21.19■□□□□ 0.98
CIRBP-212ENST00000587169 PRKAR2BP31323 418 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 ANKRD45Q5TZF3 282 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
CIRBP-212ENST00000587169 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
CIRBP-212ENST00000587169 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 CHD1LQ86WJ1 897 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 PHACTR3Q96KR7 559 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 TERF2IPQ9NYB0 399 aa21.18■□□□□ 0.98
CIRBP-212ENST00000587169 FSD2A1L4K1 749 aa21.17■□□□□ 0.98
CIRBP-212ENST00000587169 TSPYL6Q8N831 410 aa21.17■□□□□ 0.98
CIRBP-212ENST00000587169 NCKAP5LQ9HCH0 1330 aa21.17■□□□□ 0.98
CIRBP-212ENST00000587169 IPO8O15397 1037 aaKnown RBP21.17■□□□□ 0.98
CIRBP-212ENST00000587169 ABCC3O15438 1527 aa21.16■□□□□ 0.98
CIRBP-212ENST00000587169 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
CIRBP-212ENST00000587169 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
CIRBP-212ENST00000587169 CD2BP2O95400 341 aaKnown RBP21.15■□□□□ 0.98
CIRBP-212ENST00000587169 ARHGEF28Q8N1W1 1705 aaKnown RBP21.15■□□□□ 0.98
CIRBP-212ENST00000587169 POGZQ7Z3K3 1410 aa21.15■□□□□ 0.98
CIRBP-212ENST00000587169 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
CIRBP-212ENST00000587169 RBM42Q9BTD8 480 aaKnown RBP21.15■□□□□ 0.98
CIRBP-212ENST00000587169 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
CIRBP-212ENST00000587169 IL16Q14005 1332 aa21.14■□□□□ 0.97
CIRBP-212ENST00000587169 SIGLEC1Q9BZZ2 1709 aa21.13■□□□□ 0.97
CIRBP-212ENST00000587169 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
CIRBP-212ENST00000587169 SOX12O15370 315 aa21.13■□□□□ 0.97
CIRBP-212ENST00000587169 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
CIRBP-212ENST00000587169 TNPO1Q92973 898 aaKnown RBP21.12■□□□□ 0.97
CIRBP-212ENST00000587169 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
CIRBP-212ENST00000587169 ZBTB7BO15156 539 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-212ENST00000587169 RBM25P49756 843 aaKnown RBP21.11■□□□□ 0.97
CIRBP-212ENST00000587169 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-212ENST00000587169 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
CIRBP-212ENST00000587169 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
CIRBP-212ENST00000587169 KIF2CQ99661 725 aa21.1■□□□□ 0.97
CIRBP-212ENST00000587169 POLKQ9UBT6 870 aa21.1■□□□□ 0.97
CIRBP-212ENST00000587169 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
CIRBP-212ENST00000587169 VAMP4O75379 141 aa21.1■□□□□ 0.97
CIRBP-212ENST00000587169 PPIP5K1Q6PFW1 1433 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 HECW2Q9P2P5 1572 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 FCHSD2O94868 740 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 DDIT3P35638 169 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 ALDH1L2Q3SY69 923 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 EMILIN1Q9Y6C2 1016 aa21.09■□□□□ 0.97
CIRBP-212ENST00000587169 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
CIRBP-212ENST00000587169 ATAD2Q6PL18 1390 aa21.08■□□□□ 0.97
CIRBP-212ENST00000587169 HSP90AA1P07900 732 aaKnown RBP21.08■□□□□ 0.96
CIRBP-212ENST00000587169 TSPOAP1O95153 1857 aa21.08■□□□□ 0.96
CIRBP-212ENST00000587169 TBC1D9Q6ZT07 1266 aa21.07■□□□□ 0.96
CIRBP-212ENST00000587169 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
CIRBP-212ENST00000587169 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
CIRBP-212ENST00000587169 GAS2L3Q86XJ1 694 aa21.06■□□□□ 0.96
CIRBP-212ENST00000587169 FAM83GA6ND36 823 aa21.06■□□□□ 0.96
CIRBP-212ENST00000587169 GRPEL1Q9HAV7 217 aa21.06■□□□□ 0.96
CIRBP-212ENST00000587169 PTPRMP28827 1452 aa21.06■□□□□ 0.96
CIRBP-212ENST00000587169 PNPLA6Q8IY17 1366 aa21.05■□□□□ 0.96
CIRBP-212ENST00000587169 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
CIRBP-212ENST00000587169 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
CIRBP-212ENST00000587169 SNX21Q969T3 373 aa21.05■□□□□ 0.96
CIRBP-212ENST00000587169 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms