RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 FAM9BQ8IZU0 186 aa25.03■■□□□ 1.6
RETREG3-205ENST00000586870 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
RETREG3-205ENST00000586870 RGPD8O14715 1765 aaPredicted RBP25.02■■□□□ 1.6
RETREG3-205ENST00000586870 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
RETREG3-205ENST00000586870 SPATA31A6Q5VVP1 1343 aa25.01■■□□□ 1.59
RETREG3-205ENST00000586870 PANK3Q9H999 370 aa25.01■■□□□ 1.59
RETREG3-205ENST00000586870 PXDNQ92626 1479 aa25■■□□□ 1.59
RETREG3-205ENST00000586870 PARD3Q8TEW0 1356 aa25■■□□□ 1.59
RETREG3-205ENST00000586870 BRD4O60885 1362 aaPredicted RBP24.99■■□□□ 1.59
RETREG3-205ENST00000586870 SPATA31A3Q5VYP0 1347 aa24.99■■□□□ 1.59
RETREG3-205ENST00000586870 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
RETREG3-205ENST00000586870 MEX3CQ5U5Q3 659 aaKnown RBP24.98■■□□□ 1.59
RETREG3-205ENST00000586870 SBNO1A3KN83 1393 aa24.98■■□□□ 1.59
RETREG3-205ENST00000586870 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
RETREG3-205ENST00000586870 CNGB1Q14028 1251 aaPredicted RBP24.97■■□□□ 1.59
RETREG3-205ENST00000586870 POLR3AO14802 1390 aaPredicted RBP24.97■■□□□ 1.59
RETREG3-205ENST00000586870 ZNF692Q9BU19 519 aaPredicted RBP24.97■■□□□ 1.59
RETREG3-205ENST00000586870 HAP1P54257 671 aaPredicted RBP24.96■■□□□ 1.59
RETREG3-205ENST00000586870 ITSN1Q15811 1721 aa24.95■■□□□ 1.59
RETREG3-205ENST00000586870 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
RETREG3-205ENST00000586870 ILDR2Q71H61 639 aa24.94■■□□□ 1.58
RETREG3-205ENST00000586870 HDGFL2Q7Z4V5 671 aaPredicted RBP24.94■■□□□ 1.58
RETREG3-205ENST00000586870 SLC12A5Q9H2X9 1139 aa24.94■■□□□ 1.58
RETREG3-205ENST00000586870 TNS3Q68CZ2 1445 aa24.94■■□□□ 1.58
RETREG3-205ENST00000586870 ARHGEF10O15013 1369 aa24.93■■□□□ 1.58
RETREG3-205ENST00000586870 TERF2IPQ9NYB0 399 aa24.93■■□□□ 1.58
RETREG3-205ENST00000586870 PNISRQ8TF01 805 aaKnown RBP24.92■■□□□ 1.58
RETREG3-205ENST00000586870 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
RETREG3-205ENST00000586870 NLRP13Q86W25 1043 aa24.91■■□□□ 1.58
RETREG3-205ENST00000586870 ABTB2Q8N961 1025 aa24.9■■□□□ 1.58
RETREG3-205ENST00000586870 MYOM1P52179 1685 aa24.9■■□□□ 1.58
RETREG3-205ENST00000586870 ADAMTS2O95450 1211 aa24.9■■□□□ 1.58
RETREG3-205ENST00000586870 TOPAZ1Q8N9V7 1692 aa24.89■■□□□ 1.58
RETREG3-205ENST00000586870 NUTM2GQ5VZR2 741 aa24.88■■□□□ 1.57
RETREG3-205ENST00000586870 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
RETREG3-205ENST00000586870 NINLQ9Y2I6 1382 aa24.88■■□□□ 1.57
RETREG3-205ENST00000586870 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
RETREG3-205ENST00000586870 SUPT16HQ9Y5B9 1047 aaKnown RBP24.87■■□□□ 1.57
RETREG3-205ENST00000586870 KNSTRNQ9Y448 316 aa24.86■■□□□ 1.57
RETREG3-205ENST00000586870 USP6P35125 1406 aa24.86■■□□□ 1.57
RETREG3-205ENST00000586870 CC2D1BQ5T0F9 858 aaKnown RBP24.84■■□□□ 1.57
RETREG3-205ENST00000586870 C8orf37Q96NL8 207 aa24.84■■□□□ 1.57
RETREG3-205ENST00000586870 NPC1L1Q9UHC9 1359 aa24.84■■□□□ 1.57
RETREG3-205ENST00000586870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.57
RETREG3-205ENST00000586870 NGLY1Q96IV0 654 aa24.83■■□□□ 1.56
RETREG3-205ENST00000586870 TTC21BQ7Z4L5 1316 aa24.82■■□□□ 1.56
RETREG3-205ENST00000586870 CPSF1Q10570 1443 aaKnown RBP24.82■■□□□ 1.56
RETREG3-205ENST00000586870 NLRP6P59044 892 aa24.82■■□□□ 1.56
RETREG3-205ENST00000586870 LRP6O75581 1613 aa24.81■■□□□ 1.56
RETREG3-205ENST00000586870 TTC21AQ8NDW8 1320 aa24.8■■□□□ 1.56
RETREG3-205ENST00000586870 NEFLP07196 543 aa24.79■■□□□ 1.56
RETREG3-205ENST00000586870 AMER1Q5JTC6 1135 aaPredicted RBP24.79■■□□□ 1.56
RETREG3-205ENST00000586870 A0A1W2PP64 1363 aa24.79■■□□□ 1.56
RETREG3-205ENST00000586870 TRPM3Q9HCF6 1732 aaPredicted RBP24.77■■□□□ 1.56
RETREG3-205ENST00000586870 COL22A1Q8NFW1 1626 aaPredicted RBP24.77■■□□□ 1.56
RETREG3-205ENST00000586870 ANKRD36BQ8N2N9 1353 aa24.77■■□□□ 1.56
RETREG3-205ENST00000586870 INSRP06213 1382 aa24.76■■□□□ 1.55
RETREG3-205ENST00000586870 CD163L1Q9NR16 1453 aa24.76■■□□□ 1.55
RETREG3-205ENST00000586870 ZNF772Q68DY9 489 aaPredicted RBP24.75■■□□□ 1.55
RETREG3-205ENST00000586870 SSH2Q76I76 1423 aa24.75■■□□□ 1.55
RETREG3-205ENST00000586870 EDC4Q6P2E9 1401 aaKnown RBP24.74■■□□□ 1.55
RETREG3-205ENST00000586870 AFF2P51816 1311 aa24.73■■□□□ 1.55
RETREG3-205ENST00000586870 FKBP8Q14318 412 aa24.73■■□□□ 1.55
RETREG3-205ENST00000586870 NME9Q86XW9 330 aa24.72■■□□□ 1.55
RETREG3-205ENST00000586870 SOCS7O14512 581 aa24.72■■□□□ 1.55
RETREG3-205ENST00000586870 ZC3H6P61129 1189 aaKnown RBP24.72■■□□□ 1.55
RETREG3-205ENST00000586870 ALS2Q96Q42 1657 aa24.71■■□□□ 1.55
RETREG3-205ENST00000586870 GCP02774 474 aa24.71■■□□□ 1.55
RETREG3-205ENST00000586870 PRDM11Q9NQV5 511 aa24.71■■□□□ 1.55
RETREG3-205ENST00000586870 USP21Q9UK80 565 aa24.71■■□□□ 1.55
RETREG3-205ENST00000586870 SOX12O15370 315 aa24.7■■□□□ 1.54
RETREG3-205ENST00000586870 ZBTB7CA1YPR0 619 aa24.69■■□□□ 1.54
RETREG3-205ENST00000586870 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
RETREG3-205ENST00000586870 KCNH5Q8NCM2 988 aa24.68■■□□□ 1.54
RETREG3-205ENST00000586870 RGS17Q9UGC6 210 aaPredicted RBP24.68■■□□□ 1.54
RETREG3-205ENST00000586870 USP19O94966 1318 aa24.68■■□□□ 1.54
RETREG3-205ENST00000586870 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
RETREG3-205ENST00000586870 CARD14Q9BXL6 1004 aa24.68■■□□□ 1.54
RETREG3-205ENST00000586870 ZRANB1Q9UGI0 708 aa24.68■■□□□ 1.54
RETREG3-205ENST00000586870 AKAP12Q02952 1782 aa24.67■■□□□ 1.54
RETREG3-205ENST00000586870 SMG6Q86US8 1419 aaKnown RBP24.67■■□□□ 1.54
RETREG3-205ENST00000586870 FNBP4Q8N3X1 1017 aaPredicted RBP24.67■■□□□ 1.54
RETREG3-205ENST00000586870 COG3Q96JB2 828 aa24.67■■□□□ 1.54
RETREG3-205ENST00000586870 QTRT2Q9H974 415 aaKnown RBP24.64■■□□□ 1.54
RETREG3-205ENST00000586870 KIAA0232Q92628 1395 aa24.64■■□□□ 1.54
RETREG3-205ENST00000586870 CHRNA2Q15822 529 aa24.64■■□□□ 1.53
RETREG3-205ENST00000586870 MON2Q7Z3U7 1717 aa24.63■■□□□ 1.53
RETREG3-205ENST00000586870 USP31Q70CQ4 1352 aa24.63■■□□□ 1.53
RETREG3-205ENST00000586870 NSD3Q9BZ95 1437 aa24.63■■□□□ 1.53
RETREG3-205ENST00000586870 FYB1O15117 783 aa24.62■■□□□ 1.53
RETREG3-205ENST00000586870 POTEAQ6S8J7 498 aa24.62■■□□□ 1.53
RETREG3-205ENST00000586870 UNC5CLQ8IV45 518 aa24.62■■□□□ 1.53
RETREG3-205ENST00000586870 GGNBP2Q9H3C7 697 aa24.62■■□□□ 1.53
RETREG3-205ENST00000586870 BTG4Q9NY30 223 aa24.62■■□□□ 1.53
RETREG3-205ENST00000586870 BLMP54132 1417 aaPredicted RBP24.62■■□□□ 1.53
RETREG3-205ENST00000586870 TRPC5Q9UL62 973 aaPredicted RBP24.61■■□□□ 1.53
RETREG3-205ENST00000586870 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
RETREG3-205ENST00000586870 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
RETREG3-205ENST00000586870 CCDC9Q9Y3X0 531 aaKnown RBP24.6■■□□□ 1.53
RETREG3-205ENST00000586870 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms