RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 POLR3AO14802 1390 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-207ENST00000586588 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-207ENST00000586588 KIF20AO95235 890 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 KIF2CQ99661 725 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 MYOM1P52179 1685 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 SSFA2P28290 1259 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 ATP10AO60312 1499 aa16.28■□□□□ 0.2
DNMT1-207ENST00000586588 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.2
DNMT1-207ENST00000586588 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.2
DNMT1-207ENST00000586588 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.19
DNMT1-207ENST00000586588 RBSNQ9H1K0 784 aa16.27■□□□□ 0.19
DNMT1-207ENST00000586588 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
DNMT1-207ENST00000586588 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
DNMT1-207ENST00000586588 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
DNMT1-207ENST00000586588 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
DNMT1-207ENST00000586588 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 IQSEC2Q5JU85 1478 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 MYRIPQ8NFW9 859 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
DNMT1-207ENST00000586588 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-207ENST00000586588 MROH1Q8NDA8 1641 aa16.24■□□□□ 0.19
DNMT1-207ENST00000586588 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
DNMT1-207ENST00000586588 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
DNMT1-207ENST00000586588 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-207ENST00000586588 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
DNMT1-207ENST00000586588 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
DNMT1-207ENST00000586588 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
DNMT1-207ENST00000586588 NUCB2P80303 420 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
DNMT1-207ENST00000586588 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 BMP2KLQ5H9B9 411 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
DNMT1-207ENST00000586588 NUCB1Q02818 461 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 PDE4CQ08493 712 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 FRMPD1Q5SYB0 1578 aa16.22■□□□□ 0.19
DNMT1-207ENST00000586588 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
DNMT1-207ENST00000586588 GLI2P10070 1586 aa16.21■□□□□ 0.18
DNMT1-207ENST00000586588 VWDEQ8N2E2 1590 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 ARID3AQ99856 593 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
DNMT1-207ENST00000586588 CYP2E1P05181 493 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-207ENST00000586588 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
DNMT1-207ENST00000586588 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
DNMT1-207ENST00000586588 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 NEO1Q92859 1461 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 SHPRHQ149N8 1683 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 STAC3Q96MF2 364 aa16.19■□□□□ 0.18
DNMT1-207ENST00000586588 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
DNMT1-207ENST00000586588 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
DNMT1-207ENST00000586588 RAPGEF3O95398 923 aa16.18■□□□□ 0.18
DNMT1-207ENST00000586588 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
DNMT1-207ENST00000586588 PPRC1Q5VV67 1664 aaKnown RBP16.17■□□□□ 0.18
DNMT1-207ENST00000586588 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
DNMT1-207ENST00000586588 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
DNMT1-207ENST00000586588 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
DNMT1-207ENST00000586588 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
DNMT1-207ENST00000586588 KIF3BO15066 747 aa16.16■□□□□ 0.18
DNMT1-207ENST00000586588 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
DNMT1-207ENST00000586588 CEP152O94986 1710 aa16.16■□□□□ 0.18
DNMT1-207ENST00000586588 ZNF710Q8N1W2 664 aa16.15■□□□□ 0.18
DNMT1-207ENST00000586588 TRIM27P14373 513 aa16.15■□□□□ 0.18
DNMT1-207ENST00000586588 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
DNMT1-207ENST00000586588 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
DNMT1-207ENST00000586588 TET3O43151 1660 aa16.15■□□□□ 0.18
DNMT1-207ENST00000586588 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
DNMT1-207ENST00000586588 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
DNMT1-207ENST00000586588 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
DNMT1-207ENST00000586588 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
DNMT1-207ENST00000586588 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
DNMT1-207ENST00000586588 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
DNMT1-207ENST00000586588 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
DNMT1-207ENST00000586588 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
DNMT1-207ENST00000586588 RABEP1Q15276 862 aa16.13■□□□□ 0.17
DNMT1-207ENST00000586588 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
DNMT1-207ENST00000586588 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 CBX1P83916 185 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 LNPKQ9C0E8 428 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
DNMT1-207ENST00000586588 PIBF1Q8WXW3 757 aa16.11■□□□□ 0.17
DNMT1-207ENST00000586588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
DNMT1-207ENST00000586588 TRPM2O94759 1503 aa16.11■□□□□ 0.17
DNMT1-207ENST00000586588 PRPF40AO75400 957 aaKnown RBP16.1■□□□□ 0.17
DNMT1-207ENST00000586588 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
DNMT1-207ENST00000586588 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms