RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 AATKQ6ZMQ8 1374 aa25.09■■□□□ 1.61
GRN-205ENST00000586443 TTC21AQ8NDW8 1320 aa25.09■■□□□ 1.61
GRN-205ENST00000586443 NCOA3Q9Y6Q9 1424 aa25.09■■□□□ 1.61
GRN-205ENST00000586443 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
GRN-205ENST00000586443 COG3Q96JB2 828 aa25.08■■□□□ 1.61
GRN-205ENST00000586443 COL3A1P02461 1466 aaPredicted RBP25.07■■□□□ 1.6
GRN-205ENST00000586443 NGDNQ8NEJ9 315 aaKnown RBP25.07■■□□□ 1.6
GRN-205ENST00000586443 STRCP1A6NGW2 1772 aa25.07■■□□□ 1.6
GRN-205ENST00000586443 PNPLA6Q8IY17 1366 aa25.06■■□□□ 1.6
GRN-205ENST00000586443 PMFBP1Q8TBY8 1022 aa25.06■■□□□ 1.6
GRN-205ENST00000586443 OVOS2A0A0J9YW53 1432 aa25.06■■□□□ 1.6
GRN-205ENST00000586443 OVOS2Q6IE36 1432 aa25.06■■□□□ 1.6
GRN-205ENST00000586443 SMG6Q86US8 1419 aaKnown RBP25.06■■□□□ 1.6
GRN-205ENST00000586443 C14orf37Q86TY3 774 aa25.05■■□□□ 1.6
GRN-205ENST00000586443 RBM33Q96EV2 1170 aaKnown RBP25.05■■□□□ 1.6
GRN-205ENST00000586443 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
GRN-205ENST00000586443 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
GRN-205ENST00000586443 MAP2P11137 1827 aaKnown RBP25.02■■□□□ 1.6
GRN-205ENST00000586443 DCCP43146 1447 aa25.02■■□□□ 1.6
GRN-205ENST00000586443 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
GRN-205ENST00000586443 PHF8Q9UPP1 1060 aa25.01■■□□□ 1.59
GRN-205ENST00000586443 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
GRN-205ENST00000586443 ZRANB1Q9UGI0 708 aa25.01■■□□□ 1.59
GRN-205ENST00000586443 USP31Q70CQ4 1352 aa25■■□□□ 1.59
GRN-205ENST00000586443 CDK12Q9NYV4 1490 aaPredicted RBP25■■□□□ 1.59
GRN-205ENST00000586443 NGEFQ8N5V2 710 aa25■■□□□ 1.59
GRN-205ENST00000586443 USP54Q70EL1 1684 aa24.99■■□□□ 1.59
GRN-205ENST00000586443 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
GRN-205ENST00000586443 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
GRN-205ENST00000586443 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
GRN-205ENST00000586443 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
GRN-205ENST00000586443 KIF1AQ12756 1690 aa24.95■■□□□ 1.58
GRN-205ENST00000586443 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.58
GRN-205ENST00000586443 DIAPH1O60610 1272 aaKnown RBP24.95■■□□□ 1.58
GRN-205ENST00000586443 ESCO1Q5FWF5 840 aa24.94■■□□□ 1.58
GRN-205ENST00000586443 CCDC146Q8IYE0 955 aa24.94■■□□□ 1.58
GRN-205ENST00000586443 RUNDC1Q96C34 613 aa24.93■■□□□ 1.58
GRN-205ENST00000586443 C1orf167Q5SNV9 1468 aa24.93■■□□□ 1.58
GRN-205ENST00000586443 IQSEC2Q5JU85 1478 aa24.92■■□□□ 1.58
GRN-205ENST00000586443 U2AF1L5P0DN76 240 aaPredicted RBP24.92■■□□□ 1.58
GRN-205ENST00000586443 U2AF1Q01081 240 aaKnown RBP eCLIP24.92■■□□□ 1.58
GRN-205ENST00000586443 SALL2Q9Y467 1007 aaPredicted RBP24.92■■□□□ 1.58
GRN-205ENST00000586443 EMILIN1Q9Y6C2 1016 aa24.92■■□□□ 1.58
GRN-205ENST00000586443 ZNF521Q96K83 1311 aa24.91■■□□□ 1.58
GRN-205ENST00000586443 APAF1O14727 1248 aa24.91■■□□□ 1.58
GRN-205ENST00000586443 MST1RQ04912 1400 aa24.9■■□□□ 1.58
GRN-205ENST00000586443 FBLN1P23142 703 aa24.9■■□□□ 1.58
GRN-205ENST00000586443 NCBP3Q53F19 620 aaKnown RBP24.9■■□□□ 1.58
GRN-205ENST00000586443 MARF1Q9Y4F3 1742 aaKnown RBP24.9■■□□□ 1.58
GRN-205ENST00000586443 ATF3P18847 181 aa24.89■■□□□ 1.58
GRN-205ENST00000586443 XIRP1Q702N8 1843 aaKnown RBP24.89■■□□□ 1.58
GRN-205ENST00000586443 PPM1GO15355 546 aaPredicted RBP24.88■■□□□ 1.57
GRN-205ENST00000586443 MSH6P52701 1360 aa24.87■■□□□ 1.57
GRN-205ENST00000586443 U2SURPO15042 1029 aaKnown RBP24.87■■□□□ 1.57
GRN-205ENST00000586443 RRS1Q15050 365 aaKnown RBP24.87■■□□□ 1.57
GRN-205ENST00000586443 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
GRN-205ENST00000586443 ORAI2Q96SN7 254 aa24.87■■□□□ 1.57
GRN-205ENST00000586443 PNNQ9H307 717 aaKnown RBP24.87■■□□□ 1.57
GRN-205ENST00000586443 DMRT2Q9Y5R5 561 aa24.87■■□□□ 1.57
GRN-205ENST00000586443 PSME1Q06323 249 aa24.86■■□□□ 1.57
GRN-205ENST00000586443 NEFLP07196 543 aa24.85■■□□□ 1.57
GRN-205ENST00000586443 NLRP6P59044 892 aa24.84■■□□□ 1.57
GRN-205ENST00000586443 ABTB2Q8N961 1025 aa24.84■■□□□ 1.57
GRN-205ENST00000586443 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
GRN-205ENST00000586443 IL13P35225 146 aa24.84■■□□□ 1.57
GRN-205ENST00000586443 PEAK1Q9H792 1746 aa24.83■■□□□ 1.57
GRN-205ENST00000586443 FCHSD2O94868 740 aa24.83■■□□□ 1.57
GRN-205ENST00000586443 TCP11L2Q8N4U5 519 aa24.83■■□□□ 1.57
GRN-205ENST00000586443 PLEKHF1Q96S99 279 aa24.83■■□□□ 1.57
GRN-205ENST00000586443 KIF24Q5T7B8 1368 aa24.82■■□□□ 1.56
GRN-205ENST00000586443 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
GRN-205ENST00000586443 GOLGA2Q08379 1002 aa24.82■■□□□ 1.56
GRN-205ENST00000586443 TRPM3Q9HCF6 1732 aaPredicted RBP24.82■■□□□ 1.56
GRN-205ENST00000586443 ZNF335Q9H4Z2 1342 aaPredicted RBP24.82■■□□□ 1.56
GRN-205ENST00000586443 CCDC27Q2M243 656 aa24.81■■□□□ 1.56
GRN-205ENST00000586443 CDCA7LQ96GN5 454 aa24.81■■□□□ 1.56
GRN-205ENST00000586443 SBNO1A3KN83 1393 aa24.81■■□□□ 1.56
GRN-205ENST00000586443 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
GRN-205ENST00000586443 FOXO3O43524 673 aa24.8■■□□□ 1.56
GRN-205ENST00000586443 MAP3K19Q56UN5 1328 aa24.79■■□□□ 1.56
GRN-205ENST00000586443 FLT4P35916 1363 aa24.79■■□□□ 1.56
GRN-205ENST00000586443 WWC1Q8IX03 1113 aa24.77■■□□□ 1.56
GRN-205ENST00000586443 MAPK8IP3Q9UPT6 1336 aa24.77■■□□□ 1.56
GRN-205ENST00000586443 RSPH6AQ9H0K4 717 aa24.76■■□□□ 1.55
GRN-205ENST00000586443 RNF123Q5XPI4 1314 aa24.76■■□□□ 1.55
GRN-205ENST00000586443 SLFN5Q08AF3 891 aa24.76■■□□□ 1.55
GRN-205ENST00000586443 RGPD1P0DJD0 1748 aa24.75■■□□□ 1.55
GRN-205ENST00000586443 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
GRN-205ENST00000586443 TRMT2AQ8IZ69 625 aaKnown RBP24.75■■□□□ 1.55
GRN-205ENST00000586443 EIF4A2Q14240 407 aaKnown RBP24.74■■□□□ 1.55
GRN-205ENST00000586443 FKBP8Q14318 412 aa24.74■■□□□ 1.55
GRN-205ENST00000586443 SLIT3O75094 1523 aa24.74■■□□□ 1.55
GRN-205ENST00000586443 NFAT5O94916 1531 aa24.74■■□□□ 1.55
GRN-205ENST00000586443 RTL1A6NKG5 1358 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 E9PSI1 815 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 SOX12O15370 315 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 DUSP27Q5VZP5 1158 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 WDR63Q8IWG1 891 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 KCNH5Q8NCM2 988 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms