RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
PCSK4-203ENST00000586002 USP6P35125 1406 aa24.22■■□□□ 1.47
PCSK4-203ENST00000586002 TTC21BQ7Z4L5 1316 aa24.21■■□□□ 1.47
PCSK4-203ENST00000586002 SHPRHQ149N8 1683 aa24.2■■□□□ 1.46
PCSK4-203ENST00000586002 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
PCSK4-203ENST00000586002 TTC21AQ8NDW8 1320 aa24.18■■□□□ 1.46
PCSK4-203ENST00000586002 NLRP13Q86W25 1043 aa24.18■■□□□ 1.46
PCSK4-203ENST00000586002 CABLES1Q8TDN4 633 aa24.18■■□□□ 1.46
PCSK4-203ENST00000586002 CD163L1Q9NR16 1453 aa24.18■■□□□ 1.46
PCSK4-203ENST00000586002 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
PCSK4-203ENST00000586002 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
PCSK4-203ENST00000586002 MEX3CQ5U5Q3 659 aaKnown RBP24.17■■□□□ 1.46
PCSK4-203ENST00000586002 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
PCSK4-203ENST00000586002 TRPM3Q9HCF6 1732 aaPredicted RBP24.17■■□□□ 1.46
PCSK4-203ENST00000586002 A0A1W2PP64 1363 aa24.16■■□□□ 1.46
PCSK4-203ENST00000586002 ANKRD36BQ8N2N9 1353 aa24.16■■□□□ 1.46
PCSK4-203ENST00000586002 NLRP6P59044 892 aa24.16■■□□□ 1.46
PCSK4-203ENST00000586002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
PCSK4-203ENST00000586002 ADAMTS2O95450 1211 aa24.15■■□□□ 1.46
PCSK4-203ENST00000586002 KIF7Q2M1P5 1343 aa24.14■■□□□ 1.46
PCSK4-203ENST00000586002 EDC4Q6P2E9 1401 aaKnown RBP24.12■■□□□ 1.45
PCSK4-203ENST00000586002 COL22A1Q8NFW1 1626 aaPredicted RBP24.12■■□□□ 1.45
PCSK4-203ENST00000586002 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
PCSK4-203ENST00000586002 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
PCSK4-203ENST00000586002 NGLY1Q96IV0 654 aa24.1■■□□□ 1.45
PCSK4-203ENST00000586002 CARD14Q9BXL6 1004 aa24.1■■□□□ 1.45
PCSK4-203ENST00000586002 PANK3Q9H999 370 aa24.1■■□□□ 1.45
PCSK4-203ENST00000586002 LRP6O75581 1613 aa24.1■■□□□ 1.45
PCSK4-203ENST00000586002 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
PCSK4-203ENST00000586002 CCDC7Q96M83 1385 aa24.08■■□□□ 1.45
PCSK4-203ENST00000586002 NME9Q86XW9 330 aa24.08■■□□□ 1.45
PCSK4-203ENST00000586002 C8orf37Q96NL8 207 aa24.08■■□□□ 1.45
PCSK4-203ENST00000586002 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.44
PCSK4-203ENST00000586002 MED1Q15648 1581 aaPredicted RBP24.08■■□□□ 1.44
PCSK4-203ENST00000586002 GCP02774 474 aa24.07■■□□□ 1.44
PCSK4-203ENST00000586002 USP19O94966 1318 aa24.07■■□□□ 1.44
PCSK4-203ENST00000586002 ZRANB1Q9UGI0 708 aa24.06■■□□□ 1.44
PCSK4-203ENST00000586002 USP31Q70CQ4 1352 aa24.05■■□□□ 1.44
PCSK4-203ENST00000586002 MON2Q7Z3U7 1717 aa24.05■■□□□ 1.44
PCSK4-203ENST00000586002 FYB1O15117 783 aa24.04■■□□□ 1.44
PCSK4-203ENST00000586002 KCNH5Q8NCM2 988 aa24.04■■□□□ 1.44
PCSK4-203ENST00000586002 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
PCSK4-203ENST00000586002 ZC3H6P61129 1189 aaKnown RBP24.03■■□□□ 1.44
PCSK4-203ENST00000586002 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
PCSK4-203ENST00000586002 COG3Q96JB2 828 aa24.02■■□□□ 1.44
PCSK4-203ENST00000586002 ZNF772Q68DY9 489 aaPredicted RBP24.01■■□□□ 1.43
PCSK4-203ENST00000586002 AFF2P51816 1311 aa24.01■■□□□ 1.43
PCSK4-203ENST00000586002 MYOM1P52179 1685 aa24■■□□□ 1.43
PCSK4-203ENST00000586002 PRDM11Q9NQV5 511 aa24■■□□□ 1.43
PCSK4-203ENST00000586002 RGS17Q9UGC6 210 aaPredicted RBP24■■□□□ 1.43
PCSK4-203ENST00000586002 CGNL1Q0VF96 1302 aa24■■□□□ 1.43
PCSK4-203ENST00000586002 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
PCSK4-203ENST00000586002 GGNBP2Q9H3C7 697 aa23.99■■□□□ 1.43
PCSK4-203ENST00000586002 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
PCSK4-203ENST00000586002 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
PCSK4-203ENST00000586002 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
PCSK4-203ENST00000586002 USP21Q9UK80 565 aa23.97■■□□□ 1.43
PCSK4-203ENST00000586002 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
PCSK4-203ENST00000586002 SOX12O15370 315 aa23.96■■□□□ 1.43
PCSK4-203ENST00000586002 CPDO75976 1380 aa23.95■■□□□ 1.42
PCSK4-203ENST00000586002 CHRNA2Q15822 529 aa23.95■■□□□ 1.42
PCSK4-203ENST00000586002 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
PCSK4-203ENST00000586002 ARHGEF25Q86VW2 580 aa23.94■■□□□ 1.42
PCSK4-203ENST00000586002 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
PCSK4-203ENST00000586002 QTRT2Q9H974 415 aaKnown RBP23.94■■□□□ 1.42
PCSK4-203ENST00000586002 BTG4Q9NY30 223 aa23.93■■□□□ 1.42
PCSK4-203ENST00000586002 SLIT3O75094 1523 aa23.93■■□□□ 1.42
PCSK4-203ENST00000586002 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
PCSK4-203ENST00000586002 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
PCSK4-203ENST00000586002 ZBTB7CA1YPR0 619 aa23.92■■□□□ 1.42
PCSK4-203ENST00000586002 CRYBG1Q9Y4K1 1723 aa23.92■■□□□ 1.42
PCSK4-203ENST00000586002 ABCA3Q99758 1704 aa23.91■■□□□ 1.42
PCSK4-203ENST00000586002 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
PCSK4-203ENST00000586002 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
PCSK4-203ENST00000586002 SLIT2O94813 1529 aa23.9■■□□□ 1.42
PCSK4-203ENST00000586002 TRPC5Q9UL62 973 aaPredicted RBP23.9■■□□□ 1.42
PCSK4-203ENST00000586002 PHRF1Q9P1Y6 1649 aaKnown RBP23.9■■□□□ 1.42
PCSK4-203ENST00000586002 BCL9LQ86UU0 1499 aa23.88■■□□□ 1.41
PCSK4-203ENST00000586002 EVA1CP58658 441 aa23.88■■□□□ 1.41
PCSK4-203ENST00000586002 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
PCSK4-203ENST00000586002 FBLN1P23142 703 aa23.87■■□□□ 1.41
PCSK4-203ENST00000586002 AMER1Q5JTC6 1135 aaPredicted RBP23.87■■□□□ 1.41
PCSK4-203ENST00000586002 NSD2O96028 1365 aa23.86■■□□□ 1.41
PCSK4-203ENST00000586002 USP54Q70EL1 1684 aa23.86■■□□□ 1.41
PCSK4-203ENST00000586002 RXRBP28702 533 aa23.85■■□□□ 1.41
PCSK4-203ENST00000586002 VPS72Q15906 364 aa23.85■■□□□ 1.41
PCSK4-203ENST00000586002 MORC1Q86VD1 984 aa23.85■■□□□ 1.41
PCSK4-203ENST00000586002 COL14A1Q05707 1796 aaKnown RBP23.85■■□□□ 1.41
PCSK4-203ENST00000586002 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
PCSK4-203ENST00000586002 RBM6P78332 1123 aaKnown RBP23.84■■□□□ 1.41
PCSK4-203ENST00000586002 AXIN2Q9Y2T1 843 aa23.84■■□□□ 1.41
PCSK4-203ENST00000586002 NFAT5O94916 1531 aa23.84■■□□□ 1.41
PCSK4-203ENST00000586002 STRN4Q9NRL3 753 aa23.83■■□□□ 1.41
PCSK4-203ENST00000586002 AMPHP49418 695 aa23.82■■□□□ 1.4
PCSK4-203ENST00000586002 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
PCSK4-203ENST00000586002 IP6K1Q92551 441 aa23.82■■□□□ 1.4
PCSK4-203ENST00000586002 GJD4Q96KN9 370 aaPredicted RBP23.82■■□□□ 1.4
PCSK4-203ENST00000586002 CCDC9Q9Y3X0 531 aaKnown RBP23.82■■□□□ 1.4
PCSK4-203ENST00000586002 MAP3K19Q56UN5 1328 aa23.82■■□□□ 1.4
PCSK4-203ENST00000586002 RRS1Q15050 365 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms