RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 CARD14Q9BXL6 1004 aa24.34■■□□□ 1.49
RBFOX1-222ENST00000585867 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
RBFOX1-222ENST00000585867 BRD4O60885 1362 aaPredicted RBP24.33■■□□□ 1.49
RBFOX1-222ENST00000585867 HSPA1LP34931 641 aa24.33■■□□□ 1.48
RBFOX1-222ENST00000585867 TTC21BQ7Z4L5 1316 aa24.32■■□□□ 1.48
RBFOX1-222ENST00000585867 LRRC59Q96AG4 307 aaKnown RBP24.32■■□□□ 1.48
RBFOX1-222ENST00000585867 PRKRIP1Q9H875 184 aaPredicted RBP24.32■■□□□ 1.48
RBFOX1-222ENST00000585867 EDC4Q6P2E9 1401 aaKnown RBP24.32■■□□□ 1.48
RBFOX1-222ENST00000585867 SSH2Q76I76 1423 aa24.32■■□□□ 1.48
RBFOX1-222ENST00000585867 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
RBFOX1-222ENST00000585867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.31■■□□□ 1.48
RBFOX1-222ENST00000585867 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
RBFOX1-222ENST00000585867 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
RBFOX1-222ENST00000585867 SPATA31A3Q5VYP0 1347 aa24.3■■□□□ 1.48
RBFOX1-222ENST00000585867 COL16A1Q07092 1604 aaPredicted RBP24.3■■□□□ 1.48
RBFOX1-222ENST00000585867 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
RBFOX1-222ENST00000585867 TTC21AQ8NDW8 1320 aa24.28■■□□□ 1.48
RBFOX1-222ENST00000585867 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
RBFOX1-222ENST00000585867 ABTB2Q8N961 1025 aa24.28■■□□□ 1.48
RBFOX1-222ENST00000585867 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
RBFOX1-222ENST00000585867 PER1O15534 1290 aaPredicted RBP24.27■■□□□ 1.48
RBFOX1-222ENST00000585867 KNSTRNQ9Y448 316 aa24.26■■□□□ 1.47
RBFOX1-222ENST00000585867 RALBP1Q15311 655 aa24.25■■□□□ 1.47
RBFOX1-222ENST00000585867 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
RBFOX1-222ENST00000585867 NME9Q86XW9 330 aa24.25■■□□□ 1.47
RBFOX1-222ENST00000585867 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
RBFOX1-222ENST00000585867 CGNL1Q0VF96 1302 aa24.23■■□□□ 1.47
RBFOX1-222ENST00000585867 ARHGEF10O15013 1369 aa24.22■■□□□ 1.47
RBFOX1-222ENST00000585867 FYB1O15117 783 aa24.22■■□□□ 1.47
RBFOX1-222ENST00000585867 NPC1L1Q9UHC9 1359 aa24.22■■□□□ 1.47
RBFOX1-222ENST00000585867 NLRP6P59044 892 aa24.21■■□□□ 1.47
RBFOX1-222ENST00000585867 ZRANB1Q9UGI0 708 aa24.21■■□□□ 1.47
RBFOX1-222ENST00000585867 PLEKHG5O94827 1062 aa24.2■■□□□ 1.47
RBFOX1-222ENST00000585867 NLRP13Q86W25 1043 aa24.2■■□□□ 1.47
RBFOX1-222ENST00000585867 PIK3C2AO00443 1686 aa24.2■■□□□ 1.46
RBFOX1-222ENST00000585867 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
RBFOX1-222ENST00000585867 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
RBFOX1-222ENST00000585867 PARD3Q8TEW0 1356 aa24.19■■□□□ 1.46
RBFOX1-222ENST00000585867 JCADQ9P266 1359 aa24.19■■□□□ 1.46
RBFOX1-222ENST00000585867 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
RBFOX1-222ENST00000585867 USP31Q70CQ4 1352 aa24.17■■□□□ 1.46
RBFOX1-222ENST00000585867 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
RBFOX1-222ENST00000585867 COG3Q96JB2 828 aa24.16■■□□□ 1.46
RBFOX1-222ENST00000585867 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
RBFOX1-222ENST00000585867 MYBBP1AQ9BQG0 1328 aaKnown RBP24.15■■□□□ 1.46
RBFOX1-222ENST00000585867 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
RBFOX1-222ENST00000585867 SHPRHQ149N8 1683 aa24.14■■□□□ 1.46
RBFOX1-222ENST00000585867 CC2D1BQ5T0F9 858 aaKnown RBP24.14■■□□□ 1.45
RBFOX1-222ENST00000585867 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
RBFOX1-222ENST00000585867 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
RBFOX1-222ENST00000585867 NSD2O96028 1365 aa24.13■■□□□ 1.45
RBFOX1-222ENST00000585867 OVOS2A0A0J9YW53 1432 aa24.12■■□□□ 1.45
RBFOX1-222ENST00000585867 OVOS2Q6IE36 1432 aa24.12■■□□□ 1.45
RBFOX1-222ENST00000585867 USP19O94966 1318 aa24.12■■□□□ 1.45
RBFOX1-222ENST00000585867 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
RBFOX1-222ENST00000585867 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
RBFOX1-222ENST00000585867 MARF1Q9Y4F3 1742 aaKnown RBP24.11■■□□□ 1.45
RBFOX1-222ENST00000585867 USP54Q70EL1 1684 aa24.1■■□□□ 1.45
RBFOX1-222ENST00000585867 NUTM2BA6NNL0 878 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 NUTM2EB1AL46 878 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 SOX12O15370 315 aa24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 GCP02774 474 aa24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 MORC1Q86VD1 984 aa24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 NUTM2AQ8IVF1 878 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
RBFOX1-222ENST00000585867 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.45
RBFOX1-222ENST00000585867 MRS2Q9HD23 443 aa24.08■■□□□ 1.45
RBFOX1-222ENST00000585867 ANKRD26Q9UPS8 1709 aa24.08■■□□□ 1.44
RBFOX1-222ENST00000585867 CRYBG1Q9Y4K1 1723 aa24.08■■□□□ 1.44
RBFOX1-222ENST00000585867 SLIT3O75094 1523 aa24.07■■□□□ 1.44
RBFOX1-222ENST00000585867 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-222ENST00000585867 TNNT2P45379 298 aaPredicted RBP24.05■■□□□ 1.44
RBFOX1-222ENST00000585867 ABCA3Q99758 1704 aa24.05■■□□□ 1.44
RBFOX1-222ENST00000585867 FBLN1P23142 703 aa24.04■■□□□ 1.44
RBFOX1-222ENST00000585867 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-222ENST00000585867 YTHDC1Q96MU7 727 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-222ENST00000585867 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
RBFOX1-222ENST00000585867 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
RBFOX1-222ENST00000585867 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
RBFOX1-222ENST00000585867 NFAT5O94916 1531 aa24■■□□□ 1.43
RBFOX1-222ENST00000585867 LRP6O75581 1613 aa23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 KIAA0232Q92628 1395 aa23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 ARHGEF25Q86VW2 580 aa23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 AATKQ6ZMQ8 1374 aa23.98■■□□□ 1.43
RBFOX1-222ENST00000585867 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
RBFOX1-222ENST00000585867 CPDO75976 1380 aa23.96■■□□□ 1.43
RBFOX1-222ENST00000585867 PPP2R1AP30153 589 aa23.95■■□□□ 1.43
RBFOX1-222ENST00000585867 CHRNA2Q15822 529 aa23.95■■□□□ 1.43
RBFOX1-222ENST00000585867 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.43
RBFOX1-222ENST00000585867 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.43
RBFOX1-222ENST00000585867 FAM83GA6ND36 823 aa23.95■■□□□ 1.42
RBFOX1-222ENST00000585867 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
RBFOX1-222ENST00000585867 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
RBFOX1-222ENST00000585867 EMILIN1Q9Y6C2 1016 aa23.94■■□□□ 1.42
RBFOX1-222ENST00000585867 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
RBFOX1-222ENST00000585867 LTN1O94822 1766 aa23.93■■□□□ 1.42
RBFOX1-222ENST00000585867 AMPHP49418 695 aa23.92■■□□□ 1.42
RBFOX1-222ENST00000585867 C8orf37Q96NL8 207 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms