RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ACEP12821 1306 aa15.8■□□□□ 0.12
SMARCA4-208ENST00000585799 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
SMARCA4-208ENST00000585799 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 DDRGK1Q96HY6 314 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 NKTRP30414 1462 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 SSH1Q8WYL5 1049 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
SMARCA4-208ENST00000585799 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
SMARCA4-208ENST00000585799 FCHSD2O94868 740 aa15.78■□□□□ 0.12
SMARCA4-208ENST00000585799 C1orf115Q9H7X2 142 aa15.78■□□□□ 0.12
SMARCA4-208ENST00000585799 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
SMARCA4-208ENST00000585799 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
SMARCA4-208ENST00000585799 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-208ENST00000585799 A0A0G2JS52 829 aa15.77■□□□□ 0.12
SMARCA4-208ENST00000585799 FAM161AQ3B820 660 aa15.77■□□□□ 0.12
SMARCA4-208ENST00000585799 METP08581 1390 aa15.77■□□□□ 0.12
SMARCA4-208ENST00000585799 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.11
SMARCA4-208ENST00000585799 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-208ENST00000585799 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.11
SMARCA4-208ENST00000585799 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 GNAI1P63096 354 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 MCM10Q7L590 875 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 ARXQ96QS3 562 aa15.76■□□□□ 0.11
SMARCA4-208ENST00000585799 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-208ENST00000585799 NFE2L2Q16236 605 aa15.75■□□□□ 0.11
SMARCA4-208ENST00000585799 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
SMARCA4-208ENST00000585799 IGHDP01880 384 aa15.75■□□□□ 0.11
SMARCA4-208ENST00000585799 MFAP1P55081 439 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 BACH2Q9BYV9 841 aa15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 RLBP1P12271 317 aa15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 NSD2O96028 1365 aa15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
SMARCA4-208ENST00000585799 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 CSB-PGBD3P0DP91 1061 aa15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 ANKRD45Q5TZF3 282 aa15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
SMARCA4-208ENST00000585799 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
SMARCA4-208ENST00000585799 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
SMARCA4-208ENST00000585799 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-208ENST00000585799 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
SMARCA4-208ENST00000585799 TMEM57Q8N5G2 664 aa15.72■□□□□ 0.11
SMARCA4-208ENST00000585799 TTC21BQ7Z4L5 1316 aa15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 KCNA6P17658 529 aa15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 PROSER2Q86WR7 435 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 ZMYM4Q5VZL5 1548 aa15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 SYNMO15061 1565 aa15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 ADGRB3O60242 1522 aa15.71■□□□□ 0.11
SMARCA4-208ENST00000585799 EIF2S2P20042 333 aaKnown RBP15.71■□□□□ 0.1
SMARCA4-208ENST00000585799 STK31Q9BXU1 1019 aa15.71■□□□□ 0.1
SMARCA4-208ENST00000585799 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-208ENST00000585799 FRMPD1Q5SYB0 1578 aa15.7■□□□□ 0.1
SMARCA4-208ENST00000585799 NINLQ9Y2I6 1382 aa15.7■□□□□ 0.1
SMARCA4-208ENST00000585799 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
SMARCA4-208ENST00000585799 FOXO3O43524 673 aa15.7■□□□□ 0.1
SMARCA4-208ENST00000585799 TRIM27P14373 513 aa15.69■□□□□ 0.1
SMARCA4-208ENST00000585799 BECN1Q14457 450 aa15.69■□□□□ 0.1
SMARCA4-208ENST00000585799 ARHGAP31Q2M1Z3 1444 aa15.69■□□□□ 0.1
SMARCA4-208ENST00000585799 PCDHB15Q9Y5E8 787 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 LMTK2Q8IWU2 1503 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
SMARCA4-208ENST00000585799 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
SMARCA4-208ENST00000585799 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
SMARCA4-208ENST00000585799 POLR1AO95602 1720 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-208ENST00000585799 TSPYL6Q8N831 410 aa15.67■□□□□ 0.1
SMARCA4-208ENST00000585799 EIF4A2Q14240 407 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-208ENST00000585799 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
SMARCA4-208ENST00000585799 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
SMARCA4-208ENST00000585799 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
SMARCA4-208ENST00000585799 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
SMARCA4-208ENST00000585799 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
SMARCA4-208ENST00000585799 GLI2P10070 1586 aa15.64■□□□□ 0.09
SMARCA4-208ENST00000585799 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
SMARCA4-208ENST00000585799 MROH2AA6NES4 1674 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 CAMSAP1Q5T5Y3 1602 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 ZC3H6P61129 1189 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 TEFQ10587 303 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 FKBP5Q13451 457 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 ROBO2Q9HCK4 1378 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
SMARCA4-208ENST00000585799 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
SMARCA4-208ENST00000585799 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
SMARCA4-208ENST00000585799 IL13P35225 146 aa15.61■□□□□ 0.09
SMARCA4-208ENST00000585799 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-208ENST00000585799 ATF3P18847 181 aa15.61■□□□□ 0.09
SMARCA4-208ENST00000585799 LAMC1P11047 1609 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms