RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
GFAP-205ENST00000585543 MYOM1P52179 1685 aa23.22■■□□□ 1.31
GFAP-205ENST00000585543 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
GFAP-205ENST00000585543 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
GFAP-205ENST00000585543 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
GFAP-205ENST00000585543 HAP1P54257 671 aaPredicted RBP23.2■■□□□ 1.3
GFAP-205ENST00000585543 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
GFAP-205ENST00000585543 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
GFAP-205ENST00000585543 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
GFAP-205ENST00000585543 EDC4Q6P2E9 1401 aaKnown RBP23.17■■□□□ 1.3
GFAP-205ENST00000585543 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
GFAP-205ENST00000585543 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
GFAP-205ENST00000585543 NUTM2BA6NNL0 878 aaPredicted RBP23.16■■□□□ 1.3
GFAP-205ENST00000585543 NUTM2EB1AL46 878 aaPredicted RBP23.16■■□□□ 1.3
GFAP-205ENST00000585543 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
GFAP-205ENST00000585543 NUTM2AQ8IVF1 878 aaPredicted RBP23.16■■□□□ 1.3
GFAP-205ENST00000585543 KIF7Q2M1P5 1343 aa23.14■■□□□ 1.3
GFAP-205ENST00000585543 TTC21BQ7Z4L5 1316 aa23.14■■□□□ 1.3
GFAP-205ENST00000585543 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.29
GFAP-205ENST00000585543 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
GFAP-205ENST00000585543 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
GFAP-205ENST00000585543 SSH2Q76I76 1423 aa23.12■■□□□ 1.29
GFAP-205ENST00000585543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
GFAP-205ENST00000585543 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
GFAP-205ENST00000585543 CCDC7Q96M83 1385 aa23.12■■□□□ 1.29
GFAP-205ENST00000585543 C11orf95C9JLR9 678 aaPredicted RBP23.11■■□□□ 1.29
GFAP-205ENST00000585543 PIK3C2AO00443 1686 aa23.11■■□□□ 1.29
GFAP-205ENST00000585543 NLRP6P59044 892 aa23.1■■□□□ 1.29
GFAP-205ENST00000585543 NUTM2GQ5VZR2 741 aa23.1■■□□□ 1.29
GFAP-205ENST00000585543 MARF1Q9Y4F3 1742 aaKnown RBP23.1■■□□□ 1.29
GFAP-205ENST00000585543 PHRF1Q9P1Y6 1649 aaKnown RBP23.09■■□□□ 1.29
GFAP-205ENST00000585543 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
GFAP-205ENST00000585543 KIF20BQ96Q89 1820 aa23.08■■□□□ 1.28
GFAP-205ENST00000585543 LRP6O75581 1613 aa23.08■■□□□ 1.28
GFAP-205ENST00000585543 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
GFAP-205ENST00000585543 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
GFAP-205ENST00000585543 ADAMTS2O95450 1211 aa23.06■■□□□ 1.28
GFAP-205ENST00000585543 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
GFAP-205ENST00000585543 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
GFAP-205ENST00000585543 USP54Q70EL1 1684 aa23.04■■□□□ 1.28
GFAP-205ENST00000585543 PANK3Q9H999 370 aa23.04■■□□□ 1.28
GFAP-205ENST00000585543 USP19O94966 1318 aa23.04■■□□□ 1.28
GFAP-205ENST00000585543 NME9Q86XW9 330 aa23.03■■□□□ 1.28
GFAP-205ENST00000585543 CGNL1Q0VF96 1302 aa23.03■■□□□ 1.28
GFAP-205ENST00000585543 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
GFAP-205ENST00000585543 COG3Q96JB2 828 aa23.02■■□□□ 1.28
GFAP-205ENST00000585543 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
GFAP-205ENST00000585543 USP31Q70CQ4 1352 aa23.01■■□□□ 1.27
GFAP-205ENST00000585543 SLIT3O75094 1523 aa23.01■■□□□ 1.27
GFAP-205ENST00000585543 NGLY1Q96IV0 654 aa23■■□□□ 1.27
GFAP-205ENST00000585543 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
GFAP-205ENST00000585543 GCP02774 474 aa22.98■■□□□ 1.27
GFAP-205ENST00000585543 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
GFAP-205ENST00000585543 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
GFAP-205ENST00000585543 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
GFAP-205ENST00000585543 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
GFAP-205ENST00000585543 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
GFAP-205ENST00000585543 ANKRD26Q9UPS8 1709 aa22.96■■□□□ 1.27
GFAP-205ENST00000585543 FYB1O15117 783 aa22.95■■□□□ 1.26
GFAP-205ENST00000585543 SOX12O15370 315 aa22.95■■□□□ 1.26
GFAP-205ENST00000585543 NSD2O96028 1365 aa22.95■■□□□ 1.26
GFAP-205ENST00000585543 ZC3H6P61129 1189 aaKnown RBP22.95■■□□□ 1.26
GFAP-205ENST00000585543 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
GFAP-205ENST00000585543 GGNBP2Q9H3C7 697 aa22.95■■□□□ 1.26
GFAP-205ENST00000585543 KIAA0232Q92628 1395 aa22.94■■□□□ 1.26
GFAP-205ENST00000585543 AFF2P51816 1311 aa22.94■■□□□ 1.26
GFAP-205ENST00000585543 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
GFAP-205ENST00000585543 ZNF772Q68DY9 489 aaPredicted RBP22.94■■□□□ 1.26
GFAP-205ENST00000585543 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
GFAP-205ENST00000585543 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
GFAP-205ENST00000585543 CPDO75976 1380 aa22.93■■□□□ 1.26
GFAP-205ENST00000585543 NFAT5O94916 1531 aa22.91■■□□□ 1.26
GFAP-205ENST00000585543 LTN1O94822 1766 aa22.91■■□□□ 1.26
GFAP-205ENST00000585543 USP21Q9UK80 565 aa22.9■■□□□ 1.26
GFAP-205ENST00000585543 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.9■■□□□ 1.26
GFAP-205ENST00000585543 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
GFAP-205ENST00000585543 ZNF316A6NFI3 1004 aaPredicted RBP22.88■■□□□ 1.25
GFAP-205ENST00000585543 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
GFAP-205ENST00000585543 SLIT2O94813 1529 aa22.87■■□□□ 1.25
GFAP-205ENST00000585543 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
GFAP-205ENST00000585543 ABCC6O95255 1503 aa22.87■■□□□ 1.25
GFAP-205ENST00000585543 BTG4Q9NY30 223 aa22.86■■□□□ 1.25
GFAP-205ENST00000585543 MORC1Q86VD1 984 aa22.85■■□□□ 1.25
GFAP-205ENST00000585543 ARHGEF25Q86VW2 580 aa22.85■■□□□ 1.25
GFAP-205ENST00000585543 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
GFAP-205ENST00000585543 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
GFAP-205ENST00000585543 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
GFAP-205ENST00000585543 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
GFAP-205ENST00000585543 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
GFAP-205ENST00000585543 EVA1CP58658 441 aa22.83■■□□□ 1.25
GFAP-205ENST00000585543 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
GFAP-205ENST00000585543 PER1O15534 1290 aaPredicted RBP22.82■■□□□ 1.24
GFAP-205ENST00000585543 AMPHP49418 695 aa22.82■■□□□ 1.24
GFAP-205ENST00000585543 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
GFAP-205ENST00000585543 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
GFAP-205ENST00000585543 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
GFAP-205ENST00000585543 AMER1Q5JTC6 1135 aaPredicted RBP22.81■■□□□ 1.24
GFAP-205ENST00000585543 RTL1A6NKG5 1358 aa22.8■■□□□ 1.24
GFAP-205ENST00000585543 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
GFAP-205ENST00000585543 QTRT2Q9H974 415 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms