RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
TVP23C-210ENST00000584811 NINLQ9Y2I6 1382 aa20.41■□□□□ 0.86
TVP23C-210ENST00000584811 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
TVP23C-210ENST00000584811 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
TVP23C-210ENST00000584811 NME9Q86XW9 330 aa20.4■□□□□ 0.86
TVP23C-210ENST00000584811 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
TVP23C-210ENST00000584811 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
TVP23C-210ENST00000584811 EMILIN1Q9Y6C2 1016 aa20.39■□□□□ 0.85
TVP23C-210ENST00000584811 KIF13AQ9H1H9 1805 aa20.38■□□□□ 0.85
TVP23C-210ENST00000584811 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
TVP23C-210ENST00000584811 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
TVP23C-210ENST00000584811 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
TVP23C-210ENST00000584811 HMOX1P09601 288 aa20.37■□□□□ 0.85
TVP23C-210ENST00000584811 CCDC27Q2M243 656 aa20.37■□□□□ 0.85
TVP23C-210ENST00000584811 WASLO00401 505 aaPredicted RBP20.37■□□□□ 0.85
TVP23C-210ENST00000584811 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
TVP23C-210ENST00000584811 RIPK4P57078 832 aa20.36■□□□□ 0.85
TVP23C-210ENST00000584811 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
TVP23C-210ENST00000584811 MAPK8IP3Q9UPT6 1336 aa20.36■□□□□ 0.85
TVP23C-210ENST00000584811 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
TVP23C-210ENST00000584811 SETD1AO15047 1707 aaKnown RBP20.35■□□□□ 0.85
TVP23C-210ENST00000584811 PCDHB15Q9Y5E8 787 aa20.34■□□□□ 0.85
TVP23C-210ENST00000584811 RRS1Q15050 365 aaKnown RBP20.34■□□□□ 0.85
TVP23C-210ENST00000584811 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
TVP23C-210ENST00000584811 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
TVP23C-210ENST00000584811 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
TVP23C-210ENST00000584811 C8orf34Q49A92 452 aa20.33■□□□□ 0.85
TVP23C-210ENST00000584811 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
TVP23C-210ENST00000584811 PPIP5K1Q6PFW1 1433 aa20.33■□□□□ 0.85
TVP23C-210ENST00000584811 LTKP29376 864 aa20.33■□□□□ 0.84
TVP23C-210ENST00000584811 PRKAR2BP31323 418 aa20.32■□□□□ 0.84
TVP23C-210ENST00000584811 SLC26A8Q96RN1 970 aa20.32■□□□□ 0.84
TVP23C-210ENST00000584811 TNRQ92752 1358 aa20.32■□□□□ 0.84
TVP23C-210ENST00000584811 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
TVP23C-210ENST00000584811 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
TVP23C-210ENST00000584811 PRR36Q9H6K5 1346 aa20.31■□□□□ 0.84
TVP23C-210ENST00000584811 PNPLA6Q8IY17 1366 aa20.31■□□□□ 0.84
TVP23C-210ENST00000584811 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
TVP23C-210ENST00000584811 ROBO2Q9HCK4 1378 aa20.3■□□□□ 0.84
TVP23C-210ENST00000584811 SSH1Q8WYL5 1049 aa20.29■□□□□ 0.84
TVP23C-210ENST00000584811 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.28■□□□□ 0.84
TVP23C-210ENST00000584811 SMC4Q9NTJ3 1288 aa20.28■□□□□ 0.84
TVP23C-210ENST00000584811 MED14O60244 1454 aa20.28■□□□□ 0.84
TVP23C-210ENST00000584811 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
TVP23C-210ENST00000584811 DLC1Q96QB1 1528 aa20.28■□□□□ 0.84
TVP23C-210ENST00000584811 CPS1P31327 1500 aa20.27■□□□□ 0.84
TVP23C-210ENST00000584811 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
TVP23C-210ENST00000584811 CPSF1Q10570 1443 aaKnown RBP20.26■□□□□ 0.83
TVP23C-210ENST00000584811 SOX12O15370 315 aa20.26■□□□□ 0.83
TVP23C-210ENST00000584811 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
TVP23C-210ENST00000584811 CCDC61Q9Y6R9 512 aa20.26■□□□□ 0.83
TVP23C-210ENST00000584811 ANKRD26Q9UPS8 1709 aa20.26■□□□□ 0.83
TVP23C-210ENST00000584811 TRIM27P14373 513 aa20.25■□□□□ 0.83
TVP23C-210ENST00000584811 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
TVP23C-210ENST00000584811 LRRC7Q96NW7 1537 aa20.25■□□□□ 0.83
TVP23C-210ENST00000584811 ATP7BP35670 1465 aa20.25■□□□□ 0.83
TVP23C-210ENST00000584811 NOB1Q9ULX3 412 aaKnown RBP20.23■□□□□ 0.83
TVP23C-210ENST00000584811 ELL2O00472 640 aaPredicted RBP20.23■□□□□ 0.83
TVP23C-210ENST00000584811 FCHSD2O94868 740 aa20.23■□□□□ 0.83
TVP23C-210ENST00000584811 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
TVP23C-210ENST00000584811 SEC24BO95487 1268 aa20.22■□□□□ 0.83
TVP23C-210ENST00000584811 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
TVP23C-210ENST00000584811 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
TVP23C-210ENST00000584811 IL13P35225 146 aa20.22■□□□□ 0.83
TVP23C-210ENST00000584811 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
TVP23C-210ENST00000584811 DZIP1LQ8IYY4 767 aaKnown RBP20.22■□□□□ 0.83
TVP23C-210ENST00000584811 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
TVP23C-210ENST00000584811 FAM83GA6ND36 823 aa20.21■□□□□ 0.83
TVP23C-210ENST00000584811 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
TVP23C-210ENST00000584811 COG3Q96JB2 828 aa20.21■□□□□ 0.83
TVP23C-210ENST00000584811 DCTN1Q14203 1278 aa20.2■□□□□ 0.82
TVP23C-210ENST00000584811 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
TVP23C-210ENST00000584811 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
TVP23C-210ENST00000584811 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
TVP23C-210ENST00000584811 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
TVP23C-210ENST00000584811 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
TVP23C-210ENST00000584811 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
TVP23C-210ENST00000584811 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
TVP23C-210ENST00000584811 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
TVP23C-210ENST00000584811 ACEP12821 1306 aa20.17■□□□□ 0.82
TVP23C-210ENST00000584811 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
TVP23C-210ENST00000584811 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
TVP23C-210ENST00000584811 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
TVP23C-210ENST00000584811 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
TVP23C-210ENST00000584811 NFE2L2Q16236 605 aa20.16■□□□□ 0.82
TVP23C-210ENST00000584811 TECPR2O15040 1411 aa20.15■□□□□ 0.82
TVP23C-210ENST00000584811 CDC42BPGQ6DT37 1551 aa20.14■□□□□ 0.81
TVP23C-210ENST00000584811 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
TVP23C-210ENST00000584811 IL16Q14005 1332 aa20.13■□□□□ 0.81
TVP23C-210ENST00000584811 NEFMP07197 916 aa20.13■□□□□ 0.81
TVP23C-210ENST00000584811 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
TVP23C-210ENST00000584811 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
TVP23C-210ENST00000584811 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
TVP23C-210ENST00000584811 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
TVP23C-210ENST00000584811 MBIPQ9NS73 344 aa20.12■□□□□ 0.81
TVP23C-210ENST00000584811 USP19O94966 1318 aa20.12■□□□□ 0.81
TVP23C-210ENST00000584811 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
TVP23C-210ENST00000584811 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
TVP23C-210ENST00000584811 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
TVP23C-210ENST00000584811 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms